Gene annotation
Transcriptome id Sobic.006G181600.1
Synonym Sb06g025600
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YE21
Pfam -
Panther DB PTHR31314 PTHR31314:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14600 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os04g47890.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056785 , Zm00025a010186
Brachypodium -
Barley -
Wheat TraesCS2A02G402700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G139800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.007G189400 BEE 1, putative, expressed -
3 Sobic.001G228100 gene responsible for epi-cuticular wax accumulation in sorghum.(PubMedID : 29379518)@GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
5 Sobic.009G254500 protein kinase, putative, expressed -
6 Sobic.006G247700 Highest expression level in primordial inflorescence(PubMedID : 27501690)@-(PubMedID : 23108465)@OsSPL8 - SBP-box gene family member, expressed -
7 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
8 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.005G188500 expressed protein -
10 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
11 Sobic.002G011000 expressed protein -
12 Sobic.001G356400 expansin precursor, putative, expressed -
13 Sobic.004G062100 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL5 - SBP-box gene family member, expressed -
14 Sobic.003G299700 TCP4(PubMedID : 24676859)@CIN-like (ClassII) Subclade 16 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@slTCP3, putative, expressed -
15 Sobic.005G029700 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
16 Sobic.002G115200 cysteine-rich repeat secretory protein precursor, putative, expressed -
17 Sobic.001G119200 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.010G065700 expressed protein -
19 Sobic.007G142900 receptor-like kinase, putative, expressed -
20 Sobic.008G187400 - -


Gene co-expression network
sample Sobic006G181600 Sobic006G181600 Sobic002G139800 Sobic002G139800 Sobic006G181600--Sobic002G139800 Sobic007G189400 Sobic007G189400 Sobic006G181600--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic006G181600--Sobic001G228100 Sobic002G072700 Sobic002G072700 Sobic006G181600--Sobic002G072700 Sobic009G254500 Sobic009G254500 Sobic006G181600--Sobic009G254500 Sobic006G247700 Sobic006G247700 Sobic006G181600--Sobic006G247700 Sobic001G438500 Sobic001G438500 Sobic006G181600--Sobic001G438500 Sobic009G141300 Sobic009G141300 Sobic006G181600--Sobic009G141300 Sobic005G188500 Sobic005G188500 Sobic006G181600--Sobic005G188500 Sobic002G139800--Sobic001G438500 Sobic004G062100 Sobic004G062100 Sobic002G139800--Sobic004G062100 Sobic002G139800--Sobic009G254500 Sobic002G011000 Sobic002G011000 Sobic002G139800--Sobic002G011000 Sobic002G139800--Sobic007G189400 Sobic008G187400 Sobic008G187400 Sobic002G139800--Sobic008G187400 Sobic002G067500 Sobic002G067500 Sobic002G139800--Sobic002G067500 Sobic002G139800--Sobic002G072700 Sobic002G139800--Sobic009G141300 Sobic007G189400--Sobic002G072700 Sobic007G189400--Sobic005G188500 Sobic007G189400--Sobic009G254500 Sobic003G339600 Sobic003G339600 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic010G020600 Sobic010G020600 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic001G119200 Sobic001G119200 Sobic007G189400--Sobic001G119200 Sobic007G189400--Sobic002G139800 Sobic005G029700 Sobic005G029700 Sobic001G228100--Sobic005G029700 Sobic001G228100--Sobic002G072700 Sobic001G228100--Sobic006G247700 Sobic009G037300 Sobic009G037300 Sobic001G228100--Sobic009G037300 Sobic001G221900 Sobic001G221900 Sobic001G228100--Sobic001G221900 Sobic001G228100--Sobic007G189400 Sobic001G228100--Sobic009G254500 Sobic001G228100--Sobic003G339600 Sobic010G027700 Sobic010G027700 Sobic001G228100--Sobic010G027700 Sobic002G072700--Sobic007G189400 Sobic002G072700--Sobic001G228100 Sobic002G072700--Sobic005G029700 Sobic005G204100 Sobic005G204100 Sobic002G072700--Sobic005G204100 Sobic002G072700--Sobic002G139800 Sobic007G142900 Sobic007G142900 Sobic002G072700--Sobic007G142900 Sobic002G072700--Sobic001G221900 Sobic009G259500 Sobic009G259500 Sobic002G072700--Sobic009G259500 Sobic002G072700--Sobic006G247700 Sobic009G254500--Sobic002G011000 Sobic008G012600 Sobic008G012600 Sobic009G254500--Sobic008G012600 Sobic009G254500--Sobic009G141300 Sobic009G254500--Sobic001G119200 Sobic009G254500--Sobic001G438500 Sobic006G160800 Sobic006G160800 Sobic009G254500--Sobic006G160800 Sobic010G077700 Sobic010G077700 Sobic009G254500--Sobic010G077700 Sobic009G254500--Sobic004G062100 Sobic003G300400 Sobic003G300400 Sobic009G254500--Sobic003G300400 Sobic006G247700--Sobic005G029700 Sobic006G247700--Sobic001G228100 Sobic006G247700--Sobic002G072700 Sobic006G247700--Sobic002G139800 Sobic006G247700--Sobic009G037300 Sobic006G247700--Sobic009G254500 Sobic006G247700--Sobic006G181600 Sobic006G247700--Sobic007G189400 Sobic005G110900 Sobic005G110900 Sobic006G247700--Sobic005G110900 Sobic001G438500--Sobic004G062100 Sobic010G215700 Sobic010G215700 Sobic001G438500--Sobic010G215700 Sobic004G215000 Sobic004G215000 Sobic001G438500--Sobic004G215000 Sobic010G065700 Sobic010G065700 Sobic001G438500--Sobic010G065700 Sobic005G042200 Sobic005G042200 Sobic001G438500--Sobic005G042200 Sobic001G334501 Sobic001G334501 Sobic001G438500--Sobic001G334501 Sobic002G047366 Sobic002G047366 Sobic001G438500--Sobic002G047366 Sobic008G004200 Sobic008G004200 Sobic001G438500--Sobic008G004200 Sobic002G251200 Sobic002G251200 Sobic001G438500--Sobic002G251200 Sobic009G141300--Sobic009G254500 Sobic009G141300--Sobic002G011000 Sobic001G135600 Sobic001G135600 Sobic009G141300--Sobic001G135600 Sobic004G302700 Sobic004G302700 Sobic009G141300--Sobic004G302700 Sobic009G141300--Sobic001G119200 Sobic003G309400 Sobic003G309400 Sobic009G141300--Sobic003G309400 Sobic004G211700 Sobic004G211700 Sobic009G141300--Sobic004G211700 Sobic004G342000 Sobic004G342000 Sobic009G141300--Sobic004G342000 Sobic002G416400 Sobic002G416400 Sobic009G141300--Sobic002G416400 Sobic005G188500--Sobic001G488400 Sobic005G188500--Sobic006G044200 Sobic005G188500--Sobic007G189400 Sobic006G032800 Sobic006G032800 Sobic005G188500--Sobic006G032800 Sobic007G012800 Sobic007G012800 Sobic005G188500--Sobic007G012800 Sobic008G035400 Sobic008G035400 Sobic005G188500--Sobic008G035400 Sobic005G188500--Sobic010G065700 Sobic005G209900 Sobic005G209900 Sobic005G188500--Sobic005G209900 Sobic010G107200 Sobic010G107200 Sobic005G188500--Sobic010G107200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.