Gene annotation
Transcriptome id Sobic.007G030200.1
Synonym
Functional annotation expressed protein
UniProt Q8W0S2 , A0A1B6PFA9
Pfam PF13968
Panther DB PTHR31325:SF30 PTHR31325
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45540 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os04g08200.1 : expressed protein
MaizeGDB (Corn) Zm00025a056529
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G123900 glucosyltransferase, putative, expressed -
2 Sobic.004G092200 - -
3 Sobic.006G003200 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.006G011900 dirigent, putative -
5 Sobic.007G106050 - -
6 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.008G058400 amino acid transporter, putative, expressed -
8 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G297966 - -
10 Sobic.010G227950 - -
11 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
12 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
13 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.002G109800 glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.007G047900 expressed protein -
20 Sobic.009G095800 DUF623 domain containing protein, expressed -


Gene co-expression network
sample Sobic007G030200 Sobic007G030200 Sobic001G123900 Sobic001G123900 Sobic007G030200--Sobic001G123900 Sobic004G092200 Sobic004G092200 Sobic007G030200--Sobic004G092200 Sobic006G003200 Sobic006G003200 Sobic007G030200--Sobic006G003200 Sobic006G011900 Sobic006G011900 Sobic007G030200--Sobic006G011900 Sobic007G106050 Sobic007G106050 Sobic007G030200--Sobic007G106050 Sobic005G177400 Sobic005G177400 Sobic007G030200--Sobic005G177400 Sobic008G058400 Sobic008G058400 Sobic007G030200--Sobic008G058400 Sobic010G245400 Sobic010G245400 Sobic007G030200--Sobic010G245400 Sobic001G297966 Sobic001G297966 Sobic007G030200--Sobic001G297966 Sobic002G109800 Sobic002G109800 Sobic001G123900--Sobic002G109800 Sobic001G123900--Sobic007G106050 Sobic001G123900--Sobic001G297966 Sobic009G220250 Sobic009G220250 Sobic001G123900--Sobic009G220250 Sobic001G487800 Sobic001G487800 Sobic004G092200--Sobic001G487800 Sobic004G092200--Sobic010G245400 Sobic005G224300 Sobic005G224300 Sobic004G092200--Sobic005G224300 Sobic005G206000 Sobic005G206000 Sobic004G092200--Sobic005G206000 Sobic010G267200 Sobic010G267200 Sobic004G092200--Sobic010G267200 Sobic005G177100 Sobic005G177100 Sobic004G092200--Sobic005G177100 Sobic008G010500 Sobic008G010500 Sobic004G092200--Sobic008G010500 Sobic001G232400 Sobic001G232400 Sobic004G092200--Sobic001G232400 Sobic002G168800 Sobic002G168800 Sobic004G092200--Sobic002G168800 Sobic002G154700 Sobic002G154700 Sobic006G003200--Sobic002G154700 Sobic009G095800 Sobic009G095800 Sobic006G003200--Sobic009G095800 Sobic009G079900 Sobic009G079900 Sobic006G003200--Sobic009G079900 Sobic009G106500 Sobic009G106500 Sobic006G003200--Sobic009G106500 Sobic008G014700 Sobic008G014700 Sobic006G003200--Sobic008G014700 Sobic001G272600 Sobic001G272600 Sobic006G003200--Sobic001G272600 Sobic003G083600 Sobic003G083600 Sobic006G003200--Sobic003G083600 Sobic001G342000 Sobic001G342000 Sobic006G003200--Sobic001G342000 Sobic005G095500 Sobic005G095500 Sobic006G003200--Sobic005G095500 Sobic003G348600 Sobic003G348600 Sobic006G011900--Sobic003G348600 Sobic010G161800 Sobic010G161800 Sobic006G011900--Sobic010G161800 Sobic009G079925 Sobic009G079925 Sobic006G011900--Sobic009G079925 Sobic007G215900 Sobic007G215900 Sobic006G011900--Sobic007G215900 Sobic008G076300 Sobic008G076300 Sobic006G011900--Sobic008G076300 Sobic010G003600 Sobic010G003600 Sobic006G011900--Sobic010G003600 Sobic008G128066 Sobic008G128066 Sobic006G011900--Sobic008G128066 Sobic001G039200 Sobic001G039200 Sobic006G011900--Sobic001G039200 Sobic003G011600 Sobic003G011600 Sobic006G011900--Sobic003G011600 Sobic007G106050--Sobic002G109800 Sobic007G106050--Sobic001G297966 Sobic007G106050--Sobic009G220250 Sobic008G184600 Sobic008G184600 Sobic007G106050--Sobic008G184600 Sobic003G322100 Sobic003G322100 Sobic005G177400--Sobic003G322100 Sobic007G073000 Sobic007G073000 Sobic005G177400--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic005G177400--Sobic001G503000 Sobic004G193500 Sobic004G193500 Sobic005G177400--Sobic004G193500 Sobic001G274400 Sobic001G274400 Sobic005G177400--Sobic001G274400 Sobic010G082000 Sobic010G082000 Sobic005G177400--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic005G177400--Sobic001G360500 Sobic010G096700 Sobic010G096700 Sobic005G177400--Sobic010G096700 Sobic006G092700 Sobic006G092700 Sobic005G177400--Sobic006G092700 Sobic005G069166 Sobic005G069166 Sobic008G058400--Sobic005G069166 Sobic004G299500 Sobic004G299500 Sobic008G058400--Sobic004G299500 Sobic006G230100 Sobic006G230100 Sobic008G058400--Sobic006G230100 Sobic005G069332 Sobic005G069332 Sobic008G058400--Sobic005G069332 Sobic001G153100 Sobic001G153100 Sobic008G058400--Sobic001G153100 Sobic007G015100 Sobic007G015100 Sobic008G058400--Sobic007G015100 Sobic001G415100 Sobic001G415100 Sobic008G058400--Sobic001G415100 Sobic007G015000 Sobic007G015000 Sobic008G058400--Sobic007G015000 Sobic002G063700 Sobic002G063700 Sobic008G058400--Sobic002G063700 Sobic001G231800 Sobic001G231800 Sobic010G245400--Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic010G245400--Sobic001G301000 Sobic005G216400 Sobic005G216400 Sobic010G245400--Sobic005G216400 Sobic010G268700 Sobic010G268700 Sobic010G245400--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic010G245400--Sobic005G119900 Sobic005G060200 Sobic005G060200 Sobic010G245400--Sobic005G060200 Sobic007G212000 Sobic007G212000 Sobic010G245400--Sobic007G212000 Sobic003G357700 Sobic003G357700 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500 Sobic001G297966--Sobic002G109800 Sobic001G297966--Sobic007G106050 Sobic001G297966--Sobic009G220250 Sobic001G297966--Sobic008G184600
Octagon: transcription factors


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