Gene annotation
Transcriptome id Sobic.004G092200.1
Synonym
Functional annotation -
UniProt A0A194YNN6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G487800 expressed protein -
2 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.005G224300 O-methyltransferase, putative, expressed -
4 Sobic.005G206000 dirigent, putative, expressed -
5 Sobic.010G267200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
6 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
7 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G232400 - -
9 Sobic.002G168800 carotenoid cleavage dioxygenase, putative, expressed -
10 Sobic.003G045900 gibberellin 3-beta-dioxygenase 2-2, putative, expressed K04124: gibberellin 3beta-dioxygenase
11 Sobic.002G025500 expressed protein -
12 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
14 Sobic.001G232200 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.010G268700 expansin precursor, putative, expressed -
16 Sobic.003G204400 hypothetical protein -
17 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
18 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
19 Sobic.010G013000 interacting protein of DMI3, putative, expressed -
20 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic004G092200 Sobic004G092200 Sobic001G487800 Sobic001G487800 Sobic004G092200--Sobic001G487800 Sobic010G245400 Sobic010G245400 Sobic004G092200--Sobic010G245400 Sobic005G224300 Sobic005G224300 Sobic004G092200--Sobic005G224300 Sobic005G206000 Sobic005G206000 Sobic004G092200--Sobic005G206000 Sobic010G267200 Sobic010G267200 Sobic004G092200--Sobic010G267200 Sobic005G177100 Sobic005G177100 Sobic004G092200--Sobic005G177100 Sobic008G010500 Sobic008G010500 Sobic004G092200--Sobic008G010500 Sobic001G232400 Sobic001G232400 Sobic004G092200--Sobic001G232400 Sobic002G168800 Sobic002G168800 Sobic004G092200--Sobic002G168800 Sobic001G232200 Sobic001G232200 Sobic001G487800--Sobic001G232200 Sobic005G202300 Sobic005G202300 Sobic001G487800--Sobic005G202300 Sobic010G168400 Sobic010G168400 Sobic001G487800--Sobic010G168400 Sobic003G282200 Sobic003G282200 Sobic001G487800--Sobic003G282200 Sobic001G058300 Sobic001G058300 Sobic001G487800--Sobic001G058300 Sobic002G228800 Sobic002G228800 Sobic001G487800--Sobic002G228800 Sobic006G003600 Sobic006G003600 Sobic001G487800--Sobic006G003600 Sobic004G119800 Sobic004G119800 Sobic001G487800--Sobic004G119800 Sobic001G487800--Sobic010G267200 Sobic001G231800 Sobic001G231800 Sobic010G245400--Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic010G245400--Sobic001G301000 Sobic005G216400 Sobic005G216400 Sobic010G245400--Sobic005G216400 Sobic010G268700 Sobic010G268700 Sobic010G245400--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic010G245400--Sobic005G119900 Sobic005G060200 Sobic005G060200 Sobic010G245400--Sobic005G060200 Sobic007G212000 Sobic007G212000 Sobic010G245400--Sobic007G212000 Sobic003G357700 Sobic003G357700 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500 Sobic009G071300 Sobic009G071300 Sobic005G224300--Sobic009G071300 Sobic005G224300--Sobic001G232200 Sobic001G351500 Sobic001G351500 Sobic005G224300--Sobic001G351500 Sobic003G266300 Sobic003G266300 Sobic005G224300--Sobic003G266300 Sobic005G046801 Sobic005G046801 Sobic005G224300--Sobic005G046801 Sobic005G224300--Sobic001G487800 Sobic001G018600 Sobic001G018600 Sobic005G224300--Sobic001G018600 Sobic005G224300--Sobic001G232400 Sobic007G066824 Sobic007G066824 Sobic005G224300--Sobic007G066824 Sobic005G206000--Sobic001G301000 Sobic005G206000--Sobic010G268700 Sobic005G206000--Sobic008G010500 Sobic005G206000--Sobic001G231800 Sobic005G206000--Sobic005G177100 Sobic005G206000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic005G206000--Sobic006G097900 Sobic003G053600 Sobic003G053600 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901 Sobic010G267200--Sobic005G202300 Sobic010G267200--Sobic001G232200 Sobic006G174300 Sobic006G174300 Sobic010G267200--Sobic006G174300 Sobic003G319400 Sobic003G319400 Sobic010G267200--Sobic003G319400 Sobic010G267200--Sobic001G058300 Sobic006G106900 Sobic006G106900 Sobic010G267200--Sobic006G106900 Sobic003G353200 Sobic003G353200 Sobic010G267200--Sobic003G353200 Sobic009G181600 Sobic009G181600 Sobic010G267200--Sobic009G181600 Sobic003G280000 Sobic003G280000 Sobic010G267200--Sobic003G280000 Sobic005G177100--Sobic005G206000 Sobic007G177400 Sobic007G177400 Sobic005G177100--Sobic007G177400 Sobic007G064500 Sobic007G064500 Sobic005G177100--Sobic007G064500 Sobic005G177100--Sobic008G010500 Sobic005G177100--Sobic001G231800 Sobic004G346300 Sobic004G346300 Sobic005G177100--Sobic004G346300 Sobic005G162400 Sobic005G162400 Sobic005G177100--Sobic005G162400 Sobic002G366200 Sobic002G366200 Sobic005G177100--Sobic002G366200 Sobic005G177100--Sobic010G245400 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic004G121600 Sobic004G121600 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic008G010500--Sobic005G119900 Sobic008G010500--Sobic005G206000 Sobic003G441700 Sobic003G441700 Sobic008G010500--Sobic003G441700 Sobic008G010500--Sobic010G245400 Sobic003G053200 Sobic003G053200 Sobic008G010500--Sobic003G053200 Sobic001G232400--Sobic002G168800 Sobic002G025500 Sobic002G025500 Sobic001G232400--Sobic002G025500 Sobic001G232400--Sobic005G206000 Sobic001G232400--Sobic008G010500 Sobic001G232400--Sobic010G268700 Sobic007G135100 Sobic007G135100 Sobic001G232400--Sobic007G135100 Sobic010G013000 Sobic010G013000 Sobic001G232400--Sobic010G013000 Sobic001G232400--Sobic001G487800 Sobic009G219300 Sobic009G219300 Sobic001G232400--Sobic009G219300 Sobic002G168800--Sobic005G206000 Sobic002G168800--Sobic005G177100 Sobic002G168800--Sobic004G002901 Sobic002G168800--Sobic010G268700 Sobic002G168800--Sobic010G013000 Sobic002G168800--Sobic004G346300 Sobic005G220300 Sobic005G220300 Sobic002G168800--Sobic005G220300 Sobic002G168800--Sobic005G060200 Sobic002G168800--Sobic002G025500
Octagon: transcription factors


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