Gene annotation
Transcriptome id Sobic.003G204400.1
Synonym
Functional annotation hypothetical protein
UniProt A0A1B6Q4J6
Pfam PF06376
Panther DB PTHR33374 PTHR33374:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g40880.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
2 Sobic.004G008300 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
3 Sobic.009G076300 expressed protein -
4 Sobic.010G126800 lectin-like receptor kinase 7, putative, expressed -
5 Sobic.003G204300 expressed protein -
6 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
7 Sobic.004G121800 expansin precursor, putative, expressed -
8 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
9 Sobic.004G008900 Sphingoid base hydroxylase 2 SBH2 (At)(PubMedID : 27208977)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
10 Sobic.010G268700 expansin precursor, putative, expressed -
11 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
14 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
15 Sobic.008G033700 pleiotropic drug resistance protein 15, putative, expressed -
16 Sobic.009G004950 - -
17 Sobic.008G105800 cytochrome P450, putative, expressed -
18 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
20 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -


Gene co-expression network
sample Sobic003G204400 Sobic003G204400 Sobic010G117500 Sobic010G117500 Sobic003G204400--Sobic010G117500 Sobic004G008300 Sobic004G008300 Sobic003G204400--Sobic004G008300 Sobic009G076300 Sobic009G076300 Sobic003G204400--Sobic009G076300 Sobic010G126800 Sobic010G126800 Sobic003G204400--Sobic010G126800 Sobic003G204300 Sobic003G204300 Sobic003G204400--Sobic003G204300 Sobic003G441700 Sobic003G441700 Sobic003G204400--Sobic003G441700 Sobic004G121800 Sobic004G121800 Sobic003G204400--Sobic004G121800 Sobic005G216400 Sobic005G216400 Sobic003G204400--Sobic005G216400 Sobic004G008900 Sobic004G008900 Sobic003G204400--Sobic004G008900 Sobic010G117500--Sobic003G204400 Sobic010G117500--Sobic004G008300 Sobic010G117500--Sobic004G008900 Sobic010G117500--Sobic003G204300 Sobic010G117500--Sobic009G076300 Sobic010G117800 Sobic010G117800 Sobic010G117500--Sobic010G117800 Sobic005G216200 Sobic005G216200 Sobic010G117500--Sobic005G216200 Sobic006G168100 Sobic006G168100 Sobic010G117500--Sobic006G168100 Sobic003G097400 Sobic003G097400 Sobic010G117500--Sobic003G097400 Sobic004G008300--Sobic003G204300 Sobic005G066200 Sobic005G066200 Sobic004G008300--Sobic005G066200 Sobic009G004950 Sobic009G004950 Sobic004G008300--Sobic009G004950 Sobic004G008300--Sobic003G204400 Sobic004G008300--Sobic009G076300 Sobic004G008300--Sobic010G126800 Sobic009G177000 Sobic009G177000 Sobic004G008300--Sobic009G177000 Sobic004G008300--Sobic010G117500 Sobic007G119750 Sobic007G119750 Sobic004G008300--Sobic007G119750 Sobic009G076300--Sobic004G008300 Sobic009G076300--Sobic003G204300 Sobic009G076300--Sobic003G204400 Sobic009G076300--Sobic009G004950 Sobic007G066508 Sobic007G066508 Sobic009G076300--Sobic007G066508 Sobic005G220300 Sobic005G220300 Sobic009G076300--Sobic005G220300 Sobic002G009100 Sobic002G009100 Sobic009G076300--Sobic002G009100 Sobic010G126800--Sobic007G119750 Sobic010G126800--Sobic005G066200 Sobic010G126800--Sobic009G004950 Sobic002G019000 Sobic002G019000 Sobic010G126800--Sobic002G019000 Sobic003G161400 Sobic003G161400 Sobic010G126800--Sobic003G161400 Sobic010G242800 Sobic010G242800 Sobic010G126800--Sobic010G242800 Sobic002G063700 Sobic002G063700 Sobic010G126800--Sobic002G063700 Sobic005G197350 Sobic005G197350 Sobic010G126800--Sobic005G197350 Sobic008G105800 Sobic008G105800 Sobic010G126800--Sobic008G105800 Sobic003G204300--Sobic004G008300 Sobic003G204300--Sobic009G004950 Sobic003G204300--Sobic002G009100 Sobic005G119900 Sobic005G119900 Sobic003G441700--Sobic005G119900 Sobic003G053200 Sobic003G053200 Sobic003G441700--Sobic003G053200 Sobic003G441800 Sobic003G441800 Sobic003G441700--Sobic003G441800 Sobic004G121600 Sobic004G121600 Sobic003G441700--Sobic004G121600 Sobic001G301000 Sobic001G301000 Sobic003G441700--Sobic001G301000 Sobic009G055300 Sobic009G055300 Sobic003G441700--Sobic009G055300 Sobic001G181600 Sobic001G181600 Sobic003G441700--Sobic001G181600 Sobic006G097900 Sobic006G097900 Sobic003G441700--Sobic006G097900 Sobic001G231800 Sobic001G231800 Sobic003G441700--Sobic001G231800 Sobic004G121800--Sobic004G121600 Sobic004G121800--Sobic003G441700 Sobic004G121800--Sobic003G053200 Sobic001G272800 Sobic001G272800 Sobic004G121800--Sobic001G272800 Sobic008G010500 Sobic008G010500 Sobic004G121800--Sobic008G010500 Sobic004G121800--Sobic003G441800 Sobic004G121800--Sobic001G301000 Sobic004G121800--Sobic001G231800 Sobic004G121800--Sobic009G055300 Sobic003G357700 Sobic003G357700 Sobic005G216400--Sobic003G357700 Sobic002G178101 Sobic002G178101 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic006G121000 Sobic006G121000 Sobic005G216400--Sobic006G121000 Sobic007G212000 Sobic007G212000 Sobic005G216400--Sobic007G212000 Sobic005G060200 Sobic005G060200 Sobic005G216400--Sobic005G060200 Sobic003G443700 Sobic003G443700 Sobic005G216400--Sobic003G443700 Sobic002G178200 Sobic002G178200 Sobic005G216400--Sobic002G178200 Sobic004G346300 Sobic004G346300 Sobic005G216400--Sobic004G346300 Sobic004G008900--Sobic010G117500 Sobic004G008900--Sobic003G204400 Sobic004G008900--Sobic004G008300 Sobic004G008900--Sobic003G204300 Sobic010G126900 Sobic010G126900 Sobic004G008900--Sobic010G126900 Sobic004G008900--Sobic003G097400 Sobic004G008900--Sobic009G076300 Sobic004G008900--Sobic005G216200 Sobic004G008900--Sobic010G126800
Octagon: transcription factors


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