Gene annotation
Transcriptome id Sobic.008G017300.1,Sobic.008G017300.3
Synonym ATASD1, ASD1, ARAF1, ARAF
Functional annotation alpha-N-arabinofuranosidase, putative, expressed
UniProt A0A1B6PAP0 , A0A1B6PB38
Pfam PF06964
Panther DB PTHR31776 PTHR31776:SF0
NCBI CDD -
KEGG Orthology K01209; alpha-L-arabinofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10740 : alpha-L-arabinofuranosidase 1
RAP-DB (Rice) LOC_Os11g03780.2,LOC_Os11g03780.1 : alpha-N-arabinofuranosidase, putative, expressed
MaizeGDB (Corn) Zm00025a000835 , Zm00025a033391 , Zm00025a038411
Brachypodium PNT77043
Barley HORVU4Hr1G026150.40 , HORVU4Hr1G026150.17 , HORVU4Hr1G026150.14 , HORVU4Hr1G026150.27 , HORVU4Hr1G026150.26 , HORVU4Hr1G026150.25 , HORVU4Hr1G026150.24 , HORVU4Hr1G026150.23 , HORVU4Hr1G026150.22 , HORVU4Hr1G026150.21 , HORVU4Hr1G026150.20 , HORVU4Hr1G026150.29 , HORVU4Hr1G026150.28 , HORVU4Hr1G026150.35 , HORVU4Hr1G026150.36 , HORVU4Hr1G026150.37 , HORVU4Hr1G026150.30 , HORVU4Hr1G026150.31 , HORVU4Hr1G026150.38 , HORVU4Hr1G026150.39 , HORVU4Hr1G026150.8 , HORVU3Hr1G113160.5 , HORVU3Hr1G113160.4 , HORVU3Hr1G113160.7 , HORVU3Hr1G113160.6 , HORVU3Hr1G113160.1 , HORVU5Hr1G045150.8 , HORVU3Hr1G113160.3 , HORVU3Hr1G113160.2 , HORVU5Hr1G045150.9 , HORVU3Hr1G113160.9 , HORVU3Hr1G113160.8 , HORVU4Hr1G026150.16 , HORVU4Hr1G026150.18 , HORVU4Hr1G026150.19 , HORVU5Hr1G045150.6 , HORVU5Hr1G045150.7 , HORVU5Hr1G045150.4 , HORVU4Hr1G026150.15 , HORVU5Hr1G045150.2 , HORVU5Hr1G045150.3 , HORVU4Hr1G026150.10 , HORVU5Hr1G045150.1 , HORVU4Hr1G026150.12 , HORVU4Hr1G026150.13 , HORVU4Hr1G026150.11 , HORVU5Hr1G045150.14 , HORVU5Hr1G045150.15 , HORVU5Hr1G045150.16 , HORVU5Hr1G045150.17 , HORVU5Hr1G045150.10 , HORVU5Hr1G045150.11 , HORVU5Hr1G045150.12 , HORVU5Hr1G045150.13 , HORVU4Hr1G026150.9 , HORVU4Hr1G026150.4 , HORVU4Hr1G026150.5 , HORVU4Hr1G026150.6 , HORVU4Hr1G026150.7 , HORVU4Hr1G026150.1 , HORVU4Hr1G026150.2 , HORVU4Hr1G026150.3
Wheat TraesCS5A02G138400 , TraesCS4A02G186500 , TraesCS4A02G186500 , TraesCS4A02G186500 , TraesCS4A02G186500 , TraesCS5B02G138700 , TraesCS5D02G152100 , TraesCS5D02G152100 , TraesCS4B02G132300 , TraesCS4D02G127100 , TraesCS4D02G127100 , TraesCS4D02G127100 , TraesCS4B02G132300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G351501 - -
2 Sobic.003G208200 - -
3 Sobic.004G134400 - -
4 Sobic.004G274300 no apical meristem protein, putative, expressed -
5 Sobic.009G079600 - -
6 Sobic.007G085400 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.001G413300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
8 Sobic.001G093400 - -
9 Sobic.010G039150 - -
10 Sobic.001G373850 - -
11 Sobic.003G169700 - -
12 Sobic.006G252800 - -
13 Sobic.008G100201 - -
14 Sobic.001G224500 - -
15 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
16 Sobic.004G270900 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G261444 - -
18 Sobic.010G247750 - -
19 Sobic.003G260500 - -
20 Sobic.009G257000 - -


Gene co-expression network
sample Sobic008G017300 Sobic008G017300 Sobic003G351501 Sobic003G351501 Sobic008G017300--Sobic003G351501 Sobic003G208200 Sobic003G208200 Sobic008G017300--Sobic003G208200 Sobic004G134400 Sobic004G134400 Sobic008G017300--Sobic004G134400 Sobic004G274300 Sobic004G274300 Sobic008G017300--Sobic004G274300 Sobic009G079600 Sobic009G079600 Sobic008G017300--Sobic009G079600 Sobic007G085400 Sobic007G085400 Sobic008G017300--Sobic007G085400 Sobic001G413300 Sobic001G413300 Sobic008G017300--Sobic001G413300 Sobic001G093400 Sobic001G093400 Sobic008G017300--Sobic001G093400 Sobic010G039150 Sobic010G039150 Sobic008G017300--Sobic010G039150 Sobic003G351501--Sobic003G208200 Sobic003G351501--Sobic001G413300 Sobic003G351501--Sobic004G134400 Sobic003G169700 Sobic003G169700 Sobic003G351501--Sobic003G169700 Sobic003G351501--Sobic001G093400 Sobic003G351501--Sobic009G079600 Sobic003G351501--Sobic004G274300 Sobic003G351501--Sobic007G085400 Sobic009G260550 Sobic009G260550 Sobic003G351501--Sobic009G260550 Sobic001G373850 Sobic001G373850 Sobic003G208200--Sobic001G373850 Sobic003G161900 Sobic003G161900 Sobic003G208200--Sobic003G161900 Sobic003G208200--Sobic003G351501 Sobic001G261444 Sobic001G261444 Sobic003G208200--Sobic001G261444 Sobic003G208200--Sobic001G413300 Sobic001G202450 Sobic001G202450 Sobic003G208200--Sobic001G202450 Sobic003G208200--Sobic001G093400 Sobic008G100201 Sobic008G100201 Sobic003G208200--Sobic008G100201 Sobic004G115100 Sobic004G115100 Sobic003G208200--Sobic004G115100 Sobic004G134400--Sobic009G079600 Sobic004G134400--Sobic004G274300 Sobic007G127200 Sobic007G127200 Sobic004G134400--Sobic007G127200 Sobic003G187600 Sobic003G187600 Sobic004G134400--Sobic003G187600 Sobic010G247750 Sobic010G247750 Sobic004G134400--Sobic010G247750 Sobic003G260500 Sobic003G260500 Sobic004G134400--Sobic003G260500 Sobic001G323101 Sobic001G323101 Sobic004G134400--Sobic001G323101 Sobic004G133201 Sobic004G133201 Sobic004G134400--Sobic004G133201 Sobic007G132650 Sobic007G132650 Sobic004G134400--Sobic007G132650 Sobic004G274300--Sobic004G134400 Sobic004G274300--Sobic009G079600 Sobic004G274300--Sobic003G187600 Sobic004G274300--Sobic003G260500 Sobic004G274300--Sobic004G133201 Sobic004G274300--Sobic007G132650 Sobic006G107766 Sobic006G107766 Sobic004G274300--Sobic006G107766 Sobic004G274300--Sobic007G127200 Sobic003G394701 Sobic003G394701 Sobic004G274300--Sobic003G394701 Sobic009G079600--Sobic004G134400 Sobic009G079600--Sobic004G274300 Sobic009G079600--Sobic003G187600 Sobic009G079600--Sobic001G323101 Sobic009G079600--Sobic007G127200 Sobic009G079600--Sobic010G039150 Sobic009G079600--Sobic007G132650 Sobic009G079600--Sobic003G260500 Sobic009G079600--Sobic010G247750 Sobic007G085400--Sobic001G093400 Sobic001G420150 Sobic001G420150 Sobic007G085400--Sobic001G420150 Sobic007G085400--Sobic004G134400 Sobic004G276600 Sobic004G276600 Sobic007G085400--Sobic004G276600 Sobic008G093300 Sobic008G093300 Sobic007G085400--Sobic008G093300 Sobic007G085400--Sobic003G169700 Sobic007G085400--Sobic004G133201 Sobic007G085400--Sobic004G274300 Sobic002G337400 Sobic002G337400 Sobic007G085400--Sobic002G337400 Sobic001G413300--Sobic003G208200 Sobic001G413300--Sobic003G351501 Sobic001G413300--Sobic003G169700 Sobic001G413300--Sobic007G085400 Sobic002G033550 Sobic002G033550 Sobic001G413300--Sobic002G033550 Sobic001G224500 Sobic001G224500 Sobic001G413300--Sobic001G224500 Sobic001G413300--Sobic001G373850 Sobic002G245700 Sobic002G245700 Sobic001G413300--Sobic002G245700 Sobic001G413300--Sobic003G161900 Sobic007G116300 Sobic007G116300 Sobic001G093400--Sobic007G116300 Sobic001G093400--Sobic001G420150 Sobic001G093400--Sobic009G260550 Sobic009G257000 Sobic009G257000 Sobic001G093400--Sobic009G257000 Sobic001G255866 Sobic001G255866 Sobic001G093400--Sobic001G255866 Sobic001G093400--Sobic003G169700 Sobic007G090433 Sobic007G090433 Sobic001G093400--Sobic007G090433 Sobic001G093400--Sobic004G276600 Sobic001G423200 Sobic001G423200 Sobic001G093400--Sobic001G423200 Sobic010G039150--Sobic009G079600 Sobic006G029850 Sobic006G029850 Sobic010G039150--Sobic006G029850 Sobic010G039150--Sobic004G274300 Sobic010G039150--Sobic007G132650 Sobic010G039150--Sobic004G134400 Sobic010G039150--Sobic003G187600 Sobic010G039150--Sobic003G260500 Sobic010G039150--Sobic004G115100 Sobic010G039150--Sobic001G323101
Octagon: transcription factors


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