Gene annotation
Transcriptome id Sobic.008G131400.1
Synonym AtMYB78, MYB78, Sb08g018370
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5YPU9
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF594
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48000 : myb domain protein 112
RAP-DB (Rice) LOC_Os11g45740.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a014898 , Zm00025a055223 , Zm00025a028009 , Zm00025a020983 , Zm00025a038844 , Zm00025a053274 , Zm00025a014457 , Zm00025a009985 , Zm00025a009981 , Zm00025a038916 , Zm00025a026626 , Zm00025a032132 , Zm00025a037328 , Zm00025a047090 , Zm00025a028298 , Zm00025a034021 , Zm00025a034217 , Zm00025a048371 , Zm00025a053397 , Zm00025a025444 , Zm00025a039543 , Zm00025a041887 , Zm00025a020817 , Zm00025a017369 , Zm00025a043868 , Zm00025a013941 , Zm00025a029124 , Zm00025a018024 , Zm00025a007095 , Zm00025a005685 , Zm00025a000572 , Zm00025a010442 , Zm00025a004179 , Zm00025a025715 , Zm00025a056908 , Zm00025a056901
Brachypodium PNT69079 , KQJ89311 , KQK00034 , KQJ86312 , KQK07949 , KQJ82982 , KQJ92025 , KQK09372 , KQJ98746 , KQJ89177 , KQK02877 , KQK00366 , KQJ87229 , KQJ83761 , KQK20023 , KQK20025 , KQK20024 , KQK06100 , KQK20026 , PNT76712 , PNT76711 , KQK15782 , KQK09222 , KQK08236 , KQK10836 , KQK00512 , KQJ84313 , KQK19995 , KQK09332 , KQJ90325 , PNT76695 , KQK23714 , KQJ83493
Barley HORVU4Hr1G082610.1 , HORVU4Hr1G082610.4 , HORVU7Hr1G072450.2 , HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU2Hr1G106140.1 , HORVU2Hr1G106140.2 , HORVU2Hr1G106140.3 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU7Hr1G072450.3 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU7Hr1G003490.2 , HORVU6Hr1G057670.3 , HORVU6Hr1G057670.1 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU3Hr1G082210.8 , HORVU3Hr1G082210.2 , HORVU3Hr1G082210.3 , HORVU3Hr1G082210.1 , HORVU3Hr1G082210.6 , HORVU3Hr1G082210.7 , HORVU3Hr1G082210.4 , HORVU3Hr1G082210.5 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU5Hr1G022690.8 , HORVU5Hr1G022690.9 , HORVU5Hr1G022690.6 , HORVU5Hr1G022690.7 , HORVU5Hr1G022690.4 , HORVU5Hr1G022690.5 , HORVU5Hr1G022690.2 , HORVU5Hr1G022690.3 , HORVU5Hr1G022690.1 , HORVU2Hr1G091590.1 , HORVU2Hr1G091590.2 , HORVU2Hr1G091590.3 , HORVU2Hr1G091590.4 , HORVU2Hr1G091590.5 , HORVU3Hr1G100500.2 , HORVU3Hr1G100500.1 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.5 , HORVU6Hr1G060650.4 , HORVU6Hr1G060650.3 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU5Hr1G063410.3 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1 , HORVU5Hr1G022690.10 , HORVU5Hr1G022690.11 , HORVU5Hr1G022690.12 , HORVU1Hr1G008810.3 , HORVU1Hr1G008810.5 , HORVU4Hr1G028780.3 , HORVU4Hr1G028780.2 , HORVU4Hr1G028780.1 , HORVU4Hr1G028780.7 , HORVU4Hr1G028780.6 , HORVU4Hr1G028780.5 , HORVU4Hr1G028780.4 , HORVU4Hr1G028780.8 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU2Hr1G091530.1 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU1Hr1G074260.1 , HORVU1Hr1G074260.2 , HORVU1Hr1G074260.3 , HORVU1Hr1G074260.4 , HORVU1Hr1G074260.5 , HORVU1Hr1G074260.6 , HORVU1Hr1G074260.7 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU6Hr1G026450.3 , HORVU6Hr1G026450.2 , HORVU6Hr1G026450.1 , HORVU2Hr1G087990.2 , HORVU2Hr1G087990.1 , HORVU3Hr1G016940.1
Wheat TraesCS3A02G257800 , TraesCS4D02G339100 , TraesCS4A02G459200 , TraesCS2D02G446100 , TraesCS3B02G320800 , TraesCS1D02G043300 , TraesCS1D02G043300 , TraesCS3D02G255400 , TraesCS2D02G209600 , TraesCS2A02G370000 , TraesCS2D02G446000 , TraesCS6D02G207300 , TraesCS4B02G096500 , TraesCS2D02G446500 , TraesCS1A02G406600 , TraesCS5B02G330100 , TraesCS3A02G254500 , TraesCS3A02G254500 , TraesCS1D02G371800 , TraesCS1A02G268800 , TraesCS2A02G206400 , TraesCS3B02G290600 , TraesCS3B02G109800 , TraesCS2A02G447500 , TraesCS4B02G344000 , TraesCS1B02G055200 , TraesCS7A02G030600 , TraesCS1D02G371600 , TraesCS1D02G371900 , TraesCS2D02G446400 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS1A02G366000 , TraesCS4A02G172200 , TraesCS5D02G335700 , TraesCS5D02G225800 , TraesCS2A02G363800 , TraesCS2A02G447600 , TraesCS5A02G512700 , TraesCS2B02G387000 , TraesCS3B02G286500 , TraesCS1A02G366200 , TraesCSU02G069000 , TraesCS1B02G383700 , TraesCS5A02G111300 , TraesCS5A02G329900 , TraesCS5D02G128200 , TraesCS5D02G128200 , TraesCS2B02G468000 , TraesCS1D02G371400 , TraesCS7B02G031000 , TraesCS2A02G447300 , TraesCS5B02G093000 , TraesCS3B02G515900 , TraesCS5A02G217900 , TraesCS7A02G030800 , TraesCS3D02G094500 , TraesCS7A02G030700 , TraesCS3D02G286300 , TraesCS3A02G384400 , TraesCS1B02G279400 , TraesCS2D02G366800 , TraesCS4A02G217800 , TraesCS5D02G099100 , TraesCS6B02G254200 , TraesCS2A02G447400 , TraesCS1A02G366100 , TraesCS6D02G219500 , TraesCS6B02G265400 , TraesCS6A02G227700 , TraesCS7D02G026900 , TraesCS1B02G383800 , TraesCS4D02G319700 , TraesCS3D02G468400 , TraesCS4D02G142900 , TraesCS1A02G042700 , TraesCS2B02G387300 , TraesCS1D02G268900 , TraesCS3D02G377300 , TraesCS5B02G119300 , TraesCS2D02G361600 , TraesCS2D02G366400 , TraesCS5B02G216900 , TraesCS1B02G383900 , TraesCS3D02G014800 , TraesCS3D02G257800 , TraesCS6A02G236900 , TraesCS7D02G300000 , TraesCS7D02G300000 , TraesCS7D02G027000 , TraesCS2B02G381800 , TraesCS4D02G359100 , TraesCS5A02G495500 , TraesCS7D02G130100 , TraesCS3B02G126800 , TraesCS1A02G366300 , TraesCS4B02G323300
Populus -


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cDNA sequences
Sobic.008G131400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
2 Sobic.003G105800 No apical meristem protein, putative, expressed -
3 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
4 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
5 Sobic.006G100332 - -
6 Sobic.003G087200 nuclease PA3, putative, expressed -
7 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
10 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
12 Sobic.006G138800 phosphoribosyl transferase, putative, expressed K00759: APRT, adenine phosphoribosyltransferase
13 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
14 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
15 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
16 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
17 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
18 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
19 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -


Gene co-expression network
sample Sobic008G131400 Sobic008G131400 Sobic004G320600 Sobic004G320600 Sobic008G131400--Sobic004G320600 Sobic003G105800 Sobic003G105800 Sobic008G131400--Sobic003G105800 Sobic004G321800 Sobic004G321800 Sobic008G131400--Sobic004G321800 Sobic003G184900 Sobic003G184900 Sobic008G131400--Sobic003G184900 Sobic006G100332 Sobic006G100332 Sobic008G131400--Sobic006G100332 Sobic003G087200 Sobic003G087200 Sobic008G131400--Sobic003G087200 Sobic008G079300 Sobic008G079300 Sobic008G131400--Sobic008G079300 Sobic009G226300 Sobic009G226300 Sobic008G131400--Sobic009G226300 Sobic007G186200 Sobic007G186200 Sobic008G131400--Sobic007G186200 Sobic006G226400 Sobic006G226400 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic007G092900 Sobic007G092900 Sobic004G320600--Sobic007G092900 Sobic004G320600--Sobic006G100332 Sobic007G093000 Sobic007G093000 Sobic004G320600--Sobic007G093000 Sobic007G187300 Sobic007G187300 Sobic004G320600--Sobic007G187300 Sobic004G320600--Sobic009G226300 Sobic005G178100 Sobic005G178100 Sobic004G320600--Sobic005G178100 Sobic003G105800--Sobic003G184900 Sobic003G105800--Sobic008G079300 Sobic003G105800--Sobic004G321800 Sobic001G325200 Sobic001G325200 Sobic003G105800--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G105800--Sobic002G304000 Sobic007G225900 Sobic007G225900 Sobic003G105800--Sobic007G225900 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic003G105800--Sobic009G226300 Sobic004G321800--Sobic006G100332 Sobic004G321800--Sobic003G087200 Sobic003G148800 Sobic003G148800 Sobic004G321800--Sobic003G148800 Sobic004G321800--Sobic009G226300 Sobic004G321800--Sobic001G325200 Sobic004G321800--Sobic003G105800 Sobic004G321800--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic004G321800--Sobic001G150600 Sobic004G321800--Sobic004G320600 Sobic003G184900--Sobic003G105800 Sobic003G184900--Sobic008G079300 Sobic003G184900--Sobic004G321800 Sobic003G184900--Sobic006G100332 Sobic003G184900--Sobic007G225900 Sobic002G324000 Sobic002G324000 Sobic003G184900--Sobic002G324000 Sobic003G184900--Sobic003G087200 Sobic003G184900--Sobic005G178100 Sobic001G182500 Sobic001G182500 Sobic003G184900--Sobic001G182500 Sobic006G100332--Sobic001G150600 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic006G100332--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic006G100332--Sobic006G030700 Sobic001G249300 Sobic001G249300 Sobic006G100332--Sobic001G249300 Sobic006G100332--Sobic003G148800 Sobic003G087200--Sobic001G150600 Sobic003G087200--Sobic006G100332 Sobic003G087200--Sobic004G321800 Sobic003G087200--Sobic006G030700 Sobic003G087200--Sobic009G226300 Sobic006G091700 Sobic006G091700 Sobic003G087200--Sobic006G091700 Sobic003G087200--Sobic003G148800 Sobic008G153400 Sobic008G153400 Sobic003G087200--Sobic008G153400 Sobic009G114000 Sobic009G114000 Sobic003G087200--Sobic009G114000 Sobic008G079300--Sobic003G184900 Sobic008G079300--Sobic003G105800 Sobic008G079300--Sobic007G225900 Sobic008G079300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic008G079300--Sobic009G207600 Sobic008G079300--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic008G079300--Sobic009G034700 Sobic001G474500 Sobic001G474500 Sobic008G079300--Sobic001G474500 Sobic008G079300--Sobic001G325200 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic009G226300--Sobic001G325200 Sobic009G226300--Sobic002G304000 Sobic004G260000 Sobic004G260000 Sobic009G226300--Sobic004G260000 Sobic007G186200--Sobic001G325200 Sobic007G186200--Sobic002G304000 Sobic007G186200--Sobic009G226300 Sobic001G015500 Sobic001G015500 Sobic007G186200--Sobic001G015500 Sobic007G068100 Sobic007G068100 Sobic007G186200--Sobic007G068100 Sobic003G355600 Sobic003G355600 Sobic007G186200--Sobic003G355600 Sobic007G186200--Sobic001G150600 Sobic004G101900 Sobic004G101900 Sobic007G186200--Sobic004G101900 Sobic007G186200--Sobic009G054500
Octagon: transcription factors


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