Gene annotation
Transcriptome id Sobic.006G138800.1
Synonym ATAPT2, APT2, PHT1.1
Functional annotation phosphoribosyl transferase, putative, expressed
UniProt A0A1B6PLY9
Pfam PF00156
Panther DB PTHR11776:SF11 PTHR11776
NCBI CDD KOG1712; Adenine phosphoribosyl transferases
KEGG Orthology K00759; APRT, adenine phosphoribosyltransferase
Gene Ontology GO:0009116; nucleoside metabolic process


Orthologs (automatic annotation)
TAIR AT1G80050 : adenine phosphoribosyl transferase 2
RAP-DB (Rice) LOC_Os02g40010.1 : phosphoribosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a010764
Brachypodium KQJ83434 , KQK00327
Barley HORVU2Hr1G087090.8 , HORVU2Hr1G087090.9 , HORVU2Hr1G087090.2 , HORVU2Hr1G087090.3 , HORVU2Hr1G087090.7 , HORVU2Hr1G087090.5
Wheat TraesCS6D02G204800 , TraesCS2D02G356900 , TraesCS2B02G377500 , TraesCS2A02G358100 , TraesCS6A02G230100 , TraesCS6B02G251600 , TraesCS6B02G251600
Populus -


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cDNA sequences
Sobic.006G138800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G131400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.004G043001 - -
3 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
4 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
5 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
6 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
7 Sobic.003G388251 - K01166: ribonuclease T2
8 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.003G429800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LRP1, putative, expressed -
10 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
11 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
12 Sobic.008G164800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
13 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
14 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
15 Sobic.003G304200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
16 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.006G100332 - -
18 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
19 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G138800 Sobic006G138800 Sobic008G131400 Sobic008G131400 Sobic006G138800--Sobic008G131400 Sobic004G043001 Sobic004G043001 Sobic006G138800--Sobic004G043001 Sobic004G320600 Sobic004G320600 Sobic006G138800--Sobic004G320600 Sobic007G186200 Sobic007G186200 Sobic006G138800--Sobic007G186200 Sobic007G068100 Sobic007G068100 Sobic006G138800--Sobic007G068100 Sobic009G207600 Sobic009G207600 Sobic006G138800--Sobic009G207600 Sobic003G388251 Sobic003G388251 Sobic006G138800--Sobic003G388251 Sobic006G199000 Sobic006G199000 Sobic006G138800--Sobic006G199000 Sobic003G429800 Sobic003G429800 Sobic006G138800--Sobic003G429800 Sobic008G131400--Sobic004G320600 Sobic003G105800 Sobic003G105800 Sobic008G131400--Sobic003G105800 Sobic004G321800 Sobic004G321800 Sobic008G131400--Sobic004G321800 Sobic003G184900 Sobic003G184900 Sobic008G131400--Sobic003G184900 Sobic006G100332 Sobic006G100332 Sobic008G131400--Sobic006G100332 Sobic003G087200 Sobic003G087200 Sobic008G131400--Sobic003G087200 Sobic008G079300 Sobic008G079300 Sobic008G131400--Sobic008G079300 Sobic009G226300 Sobic009G226300 Sobic008G131400--Sobic009G226300 Sobic008G131400--Sobic007G186200 Sobic004G206401 Sobic004G206401 Sobic004G043001--Sobic004G206401 Sobic004G043001--Sobic006G138800 Sobic003G304200 Sobic003G304200 Sobic004G043001--Sobic003G304200 Sobic003G005600 Sobic003G005600 Sobic004G043001--Sobic003G005600 Sobic001G274800 Sobic001G274800 Sobic004G043001--Sobic001G274800 Sobic004G043001--Sobic008G131400 Sobic004G242500 Sobic004G242500 Sobic004G043001--Sobic004G242500 Sobic010G182500 Sobic010G182500 Sobic004G043001--Sobic010G182500 Sobic004G043001--Sobic007G186200 Sobic006G226400 Sobic006G226400 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic007G092900 Sobic007G092900 Sobic004G320600--Sobic007G092900 Sobic004G320600--Sobic006G100332 Sobic007G093000 Sobic007G093000 Sobic004G320600--Sobic007G093000 Sobic007G187300 Sobic007G187300 Sobic004G320600--Sobic007G187300 Sobic004G320600--Sobic009G226300 Sobic005G178100 Sobic005G178100 Sobic004G320600--Sobic005G178100 Sobic001G325200 Sobic001G325200 Sobic007G186200--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic007G186200--Sobic002G304000 Sobic007G186200--Sobic009G226300 Sobic001G015500 Sobic001G015500 Sobic007G186200--Sobic001G015500 Sobic007G186200--Sobic007G068100 Sobic003G355600 Sobic003G355600 Sobic007G186200--Sobic003G355600 Sobic001G150600 Sobic001G150600 Sobic007G186200--Sobic001G150600 Sobic004G101900 Sobic004G101900 Sobic007G186200--Sobic004G101900 Sobic009G054500 Sobic009G054500 Sobic007G186200--Sobic009G054500 Sobic007G068100--Sobic001G325200 Sobic001G474500 Sobic001G474500 Sobic007G068100--Sobic001G474500 Sobic007G068100--Sobic003G388251 Sobic003G148800 Sobic003G148800 Sobic007G068100--Sobic003G148800 Sobic009G057300 Sobic009G057300 Sobic007G068100--Sobic009G057300 Sobic007G068100--Sobic004G101900 Sobic003G428400 Sobic003G428400 Sobic007G068100--Sobic003G428400 Sobic007G068100--Sobic009G226300 Sobic007G068100--Sobic004G321800 Sobic001G504900 Sobic001G504900 Sobic009G207600--Sobic001G504900 Sobic003G398100 Sobic003G398100 Sobic009G207600--Sobic003G398100 Sobic002G338100 Sobic002G338100 Sobic009G207600--Sobic002G338100 Sobic009G207600--Sobic008G079300 Sobic009G207600--Sobic001G474500 Sobic008G153400 Sobic008G153400 Sobic009G207600--Sobic008G153400 Sobic001G496100 Sobic001G496100 Sobic009G207600--Sobic001G496100 Sobic006G091700 Sobic006G091700 Sobic009G207600--Sobic006G091700 Sobic009G207600--Sobic003G087200 Sobic004G124200 Sobic004G124200 Sobic003G388251--Sobic004G124200 Sobic003G388251--Sobic007G068100 Sobic003G388251--Sobic001G325200 Sobic003G388251--Sobic001G474500 Sobic003G388251--Sobic004G101900 Sobic003G388251--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic003G388251--Sobic009G034700 Sobic003G388251--Sobic009G057300 Sobic003G388251--Sobic001G015500 Sobic006G199000--Sobic008G153400 Sobic006G199000--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic006G199000--Sobic003G257100 Sobic006G199000--Sobic003G355600 Sobic006G199000--Sobic001G325200 Sobic006G199000--Sobic001G150600 Sobic006G199000--Sobic001G015500 Sobic001G282600 Sobic001G282600 Sobic006G199000--Sobic001G282600 Sobic006G199000--Sobic006G091700 Sobic009G211400 Sobic009G211400 Sobic003G429800--Sobic009G211400 Sobic003G010600 Sobic003G010600 Sobic003G429800--Sobic003G010600 Sobic003G429800--Sobic007G187300 Sobic003G138200 Sobic003G138200 Sobic003G429800--Sobic003G138200 Sobic005G151700 Sobic005G151700 Sobic003G429800--Sobic005G151700 Sobic003G429800--Sobic007G068100 Sobic003G429800--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic003G429800--Sobic009G029600 Sobic003G429800--Sobic009G226300
Octagon: transcription factors


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