Gene annotation
Transcriptome id Sobic.008G178400.1
Synonym
Functional annotation OsFBX213 - F-box domain containing protein, expressed
UniProt A0A1B6PEK8
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G22350 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os07g02910.1 : OsFBL33 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87316 , PNT75200 , PNT75201
Barley -
Wheat TraesCS4A02G215800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378550 - -
2 Sobic.009G070900 - -
3 Sobic.002G052500 - -
4 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
6 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
7 Sobic.003G423100 NAM, putative, expressed -
8 Sobic.001G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03437: RNA methyltransferase, TrmH family
9 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
10 Sobic.006G090201 - -
11 Sobic.006G185400 - -
12 Sobic.004G324900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.008G023500 expressed protein -
14 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -
15 Sobic.009G010800 expressed protein -
16 Sobic.001G339900 - -
17 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.004G330500 expressed protein -
19 Sobic.002G037000 ZOS7-02 - C2H2 zinc finger protein, expressed -
20 Sobic.005G037500 expressed protein -


Gene co-expression network
sample Sobic008G178400 Sobic008G178400 Sobic001G378550 Sobic001G378550 Sobic008G178400--Sobic001G378550 Sobic009G070900 Sobic009G070900 Sobic008G178400--Sobic009G070900 Sobic002G052500 Sobic002G052500 Sobic008G178400--Sobic002G052500 Sobic004G356600 Sobic004G356600 Sobic008G178400--Sobic004G356600 Sobic003G245700 Sobic003G245700 Sobic008G178400--Sobic003G245700 Sobic002G356700 Sobic002G356700 Sobic008G178400--Sobic002G356700 Sobic003G423100 Sobic003G423100 Sobic008G178400--Sobic003G423100 Sobic001G134600 Sobic001G134600 Sobic008G178400--Sobic001G134600 Sobic003G178200 Sobic003G178200 Sobic008G178400--Sobic003G178200 Sobic006G185400 Sobic006G185400 Sobic001G378550--Sobic006G185400 Sobic004G330500 Sobic004G330500 Sobic001G378550--Sobic004G330500 Sobic003G343100 Sobic003G343100 Sobic001G378550--Sobic003G343100 Sobic007G152200 Sobic007G152200 Sobic001G378550--Sobic007G152200 Sobic005G189400 Sobic005G189400 Sobic001G378550--Sobic005G189400 Sobic005G037500 Sobic005G037500 Sobic001G378550--Sobic005G037500 Sobic002G205201 Sobic002G205201 Sobic001G378550--Sobic002G205201 Sobic001G361500 Sobic001G361500 Sobic001G378550--Sobic001G361500 Sobic006G209100 Sobic006G209100 Sobic001G378550--Sobic006G209100 Sobic006G272450 Sobic006G272450 Sobic009G070900--Sobic006G272450 Sobic009G070900--Sobic001G378550 Sobic009G070900--Sobic002G052500 Sobic008G023500 Sobic008G023500 Sobic009G070900--Sobic008G023500 Sobic006G090201 Sobic006G090201 Sobic009G070900--Sobic006G090201 Sobic009G070900--Sobic003G245700 Sobic009G164200 Sobic009G164200 Sobic009G070900--Sobic009G164200 Sobic009G070900--Sobic002G356700 Sobic009G070900--Sobic006G185400 Sobic007G072901 Sobic007G072901 Sobic002G052500--Sobic007G072901 Sobic002G052500--Sobic003G245700 Sobic002G052500--Sobic003G343100 Sobic002G052500--Sobic008G023500 Sobic002G052500--Sobic006G090201 Sobic002G052500--Sobic006G185400 Sobic009G010800 Sobic009G010800 Sobic002G052500--Sobic009G010800 Sobic002G052500--Sobic003G178200 Sobic002G052500--Sobic004G330500 Sobic004G356600--Sobic006G090201 Sobic004G356600--Sobic007G072901 Sobic004G356600--Sobic009G010800 Sobic004G356600--Sobic001G361500 Sobic004G356600--Sobic003G423100 Sobic003G357000 Sobic003G357000 Sobic004G356600--Sobic003G357000 Sobic004G356600--Sobic009G164200 Sobic004G356600--Sobic006G185400 Sobic004G356600--Sobic003G245700 Sobic003G245700--Sobic003G178200 Sobic003G245700--Sobic005G189400 Sobic003G245700--Sobic006G185400 Sobic003G245700--Sobic004G330500 Sobic003G245700--Sobic008G023500 Sobic003G245700--Sobic006G090201 Sobic003G245700--Sobic002G205201 Sobic003G245700--Sobic007G152200 Sobic003G245700--Sobic001G361500 Sobic009G233600 Sobic009G233600 Sobic002G356700--Sobic009G233600 Sobic002G356700--Sobic003G178200 Sobic002G356700--Sobic003G245700 Sobic002G356700--Sobic006G090201 Sobic005G022400 Sobic005G022400 Sobic002G356700--Sobic005G022400 Sobic002G356700--Sobic001G361500 Sobic002G356700--Sobic008G023500 Sobic002G356700--Sobic009G164200 Sobic002G356700--Sobic007G072901 Sobic003G423100--Sobic002G205201 Sobic003G423100--Sobic005G022400 Sobic003G423100--Sobic003G245700 Sobic003G423100--Sobic006G090201 Sobic003G423100--Sobic005G189400 Sobic003G423100--Sobic004G330500 Sobic003G423100--Sobic006G185400 Sobic003G423100--Sobic007G152200 Sobic003G423100--Sobic001G361500 Sobic001G134600--Sobic001G378550 Sobic001G134600--Sobic002G052500 Sobic001G419900 Sobic001G419900 Sobic001G134600--Sobic001G419900 Sobic001G049000 Sobic001G049000 Sobic001G134600--Sobic001G049000 Sobic001G134600--Sobic004G356600 Sobic001G267266 Sobic001G267266 Sobic001G134600--Sobic001G267266 Sobic001G134600--Sobic006G090201 Sobic001G134600--Sobic003G343100 Sobic001G063900 Sobic001G063900 Sobic001G134600--Sobic001G063900 Sobic003G178200--Sobic003G245700 Sobic003G178200--Sobic005G189400 Sobic003G178200--Sobic004G330500 Sobic003G178200--Sobic006G185400 Sobic003G178200--Sobic008G023500 Sobic003G178200--Sobic006G090201 Sobic003G178200--Sobic007G152200 Sobic003G178200--Sobic001G361500 Sobic003G178200--Sobic002G205201
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.