Gene annotation
Transcriptome id Sobic.008G180000.2
Synonym
Functional annotation -
UniProt A0A1Z5R7J6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
2 Sobic.006G018701 - -
3 Sobic.003G160600 uncharacterized protein At4g06744 precursor, putative, expressed -
4 Sobic.010G026200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
5 Sobic.004G160000 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
6 Sobic.009G158300 - -
7 Sobic.008G153700 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.001G409000 - -
9 Sobic.002G406801 - -
10 Sobic.009G060000 WD40-like domain containing protein, putative, expressed -
11 Sobic.006G066050 - -
12 Sobic.004G308800 expressed protein -
13 Sobic.007G001800 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.002G340600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
15 Sobic.009G016900 expressed protein -
16 Sobic.009G021000 exocyst complex component 6, putative, expressed -
17 Sobic.007G161100 ENTH domain containing protein, expressed -
18 Sobic.003G445600 KIP1, putative, expressed -
19 Sobic.004G059200 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.007G195000 cystathionin beta synthase protein, putative, expressed -


Gene co-expression network
sample Sobic008G180000 Sobic008G180000 Sobic004G327000 Sobic004G327000 Sobic008G180000--Sobic004G327000 Sobic006G018701 Sobic006G018701 Sobic008G180000--Sobic006G018701 Sobic003G160600 Sobic003G160600 Sobic008G180000--Sobic003G160600 Sobic010G026200 Sobic010G026200 Sobic008G180000--Sobic010G026200 Sobic004G160000 Sobic004G160000 Sobic008G180000--Sobic004G160000 Sobic009G158300 Sobic009G158300 Sobic008G180000--Sobic009G158300 Sobic008G153700 Sobic008G153700 Sobic008G180000--Sobic008G153700 Sobic001G409000 Sobic001G409000 Sobic008G180000--Sobic001G409000 Sobic002G406801 Sobic002G406801 Sobic008G180000--Sobic002G406801 Sobic004G327000--Sobic006G018701 Sobic007G161100 Sobic007G161100 Sobic004G327000--Sobic007G161100 Sobic004G327000--Sobic004G160000 Sobic007G195000 Sobic007G195000 Sobic004G327000--Sobic007G195000 Sobic004G327000--Sobic003G160600 Sobic003G343300 Sobic003G343300 Sobic004G327000--Sobic003G343300 Sobic004G327000--Sobic010G026200 Sobic004G327000--Sobic009G158300 Sobic001G188100 Sobic001G188100 Sobic004G327000--Sobic001G188100 Sobic006G018701--Sobic009G158300 Sobic006G018701--Sobic003G160600 Sobic001G392650 Sobic001G392650 Sobic006G018701--Sobic001G392650 Sobic002G049700 Sobic002G049700 Sobic006G018701--Sobic002G049700 Sobic003G343000 Sobic003G343000 Sobic006G018701--Sobic003G343000 Sobic006G018701--Sobic002G406801 Sobic006G018701--Sobic004G327000 Sobic009G060000 Sobic009G060000 Sobic006G018701--Sobic009G060000 Sobic006G018701--Sobic003G343300 Sobic003G445600 Sobic003G445600 Sobic003G160600--Sobic003G445600 Sobic003G160600--Sobic009G158300 Sobic008G134600 Sobic008G134600 Sobic003G160600--Sobic008G134600 Sobic009G016900 Sobic009G016900 Sobic003G160600--Sobic009G016900 Sobic003G160600--Sobic001G409000 Sobic003G160600--Sobic009G060000 Sobic003G160600--Sobic006G018701 Sobic008G124301 Sobic008G124301 Sobic003G160600--Sobic008G124301 Sobic003G160600--Sobic002G049700 Sobic010G026200--Sobic004G160000 Sobic010G026200--Sobic006G018701 Sobic010G026200--Sobic004G327000 Sobic004G059200 Sobic004G059200 Sobic010G026200--Sobic004G059200 Sobic010G026200--Sobic003G343300 Sobic010G026200--Sobic003G343000 Sobic010G026200--Sobic002G406801 Sobic010G026200--Sobic007G195000 Sobic010G026200--Sobic001G392650 Sobic004G160000--Sobic004G327000 Sobic004G160000--Sobic001G188100 Sobic004G160000--Sobic010G026200 Sobic004G160000--Sobic006G018701 Sobic004G160000--Sobic003G343300 Sobic004G160000--Sobic007G195000 Sobic004G160000--Sobic002G049700 Sobic004G160000--Sobic003G160600 Sobic004G160000--Sobic009G158300 Sobic009G158300--Sobic009G060000 Sobic009G158300--Sobic002G049700 Sobic009G158300--Sobic006G018701 Sobic009G158300--Sobic003G160600 Sobic009G158300--Sobic001G392650 Sobic009G158400 Sobic009G158400 Sobic009G158300--Sobic009G158400 Sobic009G158300--Sobic003G445600 Sobic009G158300--Sobic008G134600 Sobic009G158300--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic008G153700--Sobic007G001800 Sobic008G153700--Sobic001G409000 Sobic008G153700--Sobic009G016900 Sobic006G001650 Sobic006G001650 Sobic008G153700--Sobic006G001650 Sobic006G214900 Sobic006G214900 Sobic008G153700--Sobic006G214900 Sobic003G102900 Sobic003G102900 Sobic008G153700--Sobic003G102900 Sobic004G217200 Sobic004G217200 Sobic008G153700--Sobic004G217200 Sobic006G001700 Sobic006G001700 Sobic008G153700--Sobic006G001700 Sobic009G097000 Sobic009G097000 Sobic008G153700--Sobic009G097000 Sobic001G409000--Sobic007G001800 Sobic001G409000--Sobic009G016900 Sobic001G409000--Sobic004G217200 Sobic006G164800 Sobic006G164800 Sobic001G409000--Sobic006G164800 Sobic004G062300 Sobic004G062300 Sobic001G409000--Sobic004G062300 Sobic001G409000--Sobic008G153700 Sobic003G394801 Sobic003G394801 Sobic001G409000--Sobic003G394801 Sobic002G414150 Sobic002G414150 Sobic001G409000--Sobic002G414150 Sobic001G269600 Sobic001G269600 Sobic001G409000--Sobic001G269600 Sobic002G406801--Sobic006G018701 Sobic002G406801--Sobic001G392650 Sobic002G330200 Sobic002G330200 Sobic002G406801--Sobic002G330200 Sobic002G021500 Sobic002G021500 Sobic002G406801--Sobic002G021500 Sobic002G406801--Sobic009G158300 Sobic002G406801--Sobic002G049700 Sobic002G406801--Sobic003G160600 Sobic002G406801--Sobic009G060000 Sobic002G406801--Sobic010G026200
Octagon: transcription factors


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