Gene annotation
Transcriptome id Sobic.009G009300.1,Sobic.009G009300.4,Sobic.009G009300.3
Synonym ATTPS21, TPS21
Functional annotation terpene synthase, putative, expressed
UniProt A0A1B6P5R0 , A0A1B6P5X0 , A0A1B6P5S7
Pfam PF03936 PF01397 PF01397 PF03936
Panther DB PTHR31225
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0000287; magnesium ion binding GO:0008152metabolic process GO:0010333terpene synthase activity GO:0016829lyase activity GO:0016829lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G23960 : terpene synthase 21,Terpenoid cyclases/Protein prenyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g26014.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G009300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
2 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
3 Sobic.009G136500 Major facilitator superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.003G047900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@boron transporter protein, putative, expressed -
5 Sobic.008G030600 similar to Non-specific lipid-transfer protein(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Protease inhibitor/seed storage/LTP("PubMedID : 26759170,PubMedID : 24597475")@LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.010G268900 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
8 Sobic.009G218900 CPuORF26 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
9 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
10 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
11 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
12 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
13 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.003G349100 plant-specific domain TIGR01589 family protein, expressed -
15 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
16 Sobic.003G326700 glycosyl hydrolases family 17, putative, expressed -
17 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
18 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
19 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.010G012400 anthocyanidin 3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic009G009300 Sobic009G009300 Sobic009G070700 Sobic009G070700 Sobic009G009300--Sobic009G070700 Sobic003G173700 Sobic003G173700 Sobic009G009300--Sobic003G173700 Sobic009G136500 Sobic009G136500 Sobic009G009300--Sobic009G136500 Sobic003G047900 Sobic003G047900 Sobic009G009300--Sobic003G047900 Sobic008G030600 Sobic008G030600 Sobic009G009300--Sobic008G030600 Sobic010G268900 Sobic010G268900 Sobic009G009300--Sobic010G268900 Sobic006G145600 Sobic006G145600 Sobic009G009300--Sobic006G145600 Sobic009G218900 Sobic009G218900 Sobic009G009300--Sobic009G218900 Sobic006G175700 Sobic006G175700 Sobic009G009300--Sobic006G175700 Sobic009G070600 Sobic009G070600 Sobic009G070700--Sobic009G070600 Sobic003G007800 Sobic003G007800 Sobic009G070700--Sobic003G007800 Sobic009G070700--Sobic006G175700 Sobic001G255300 Sobic001G255300 Sobic009G070700--Sobic001G255300 Sobic005G029400 Sobic005G029400 Sobic009G070700--Sobic005G029400 Sobic005G190800 Sobic005G190800 Sobic009G070700--Sobic005G190800 Sobic008G189500 Sobic008G189500 Sobic009G070700--Sobic008G189500 Sobic004G328900 Sobic004G328900 Sobic009G070700--Sobic004G328900 Sobic002G128600 Sobic002G128600 Sobic009G070700--Sobic002G128600 Sobic003G173700--Sobic009G136500 Sobic002G278800 Sobic002G278800 Sobic003G173700--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic003G173700--Sobic002G278700 Sobic001G332966 Sobic001G332966 Sobic003G173700--Sobic001G332966 Sobic003G173700--Sobic006G175700 Sobic001G338000 Sobic001G338000 Sobic003G173700--Sobic001G338000 Sobic008G030700 Sobic008G030700 Sobic003G173700--Sobic008G030700 Sobic003G131800 Sobic003G131800 Sobic003G173700--Sobic003G131800 Sobic010G012400 Sobic010G012400 Sobic003G173700--Sobic010G012400 Sobic009G136500--Sobic003G173700 Sobic009G136500--Sobic002G278800 Sobic009G136500--Sobic002G278700 Sobic009G136500--Sobic003G131800 Sobic009G136500--Sobic008G030700 Sobic009G136500--Sobic006G175700 Sobic009G136500--Sobic010G012400 Sobic009G136500--Sobic001G332966 Sobic007G195300 Sobic007G195300 Sobic009G136500--Sobic007G195300 Sobic003G047900--Sobic008G030600 Sobic001G440000 Sobic001G440000 Sobic003G047900--Sobic001G440000 Sobic006G086800 Sobic006G086800 Sobic003G047900--Sobic006G086800 Sobic001G518200 Sobic001G518200 Sobic003G047900--Sobic001G518200 Sobic003G047900--Sobic009G009300 Sobic008G075200 Sobic008G075200 Sobic003G047900--Sobic008G075200 Sobic010G147500 Sobic010G147500 Sobic003G047900--Sobic010G147500 Sobic009G231100 Sobic009G231100 Sobic003G047900--Sobic009G231100 Sobic003G047900--Sobic009G070700 Sobic008G030600--Sobic003G047900 Sobic008G030600--Sobic006G086800 Sobic008G030600--Sobic009G218900 Sobic008G030600--Sobic009G070700 Sobic008G030600--Sobic001G440000 Sobic008G030600--Sobic006G145600 Sobic008G030600--Sobic009G009300 Sobic003G326700 Sobic003G326700 Sobic008G030600--Sobic003G326700 Sobic008G162300 Sobic008G162300 Sobic008G030600--Sobic008G162300 Sobic004G157550 Sobic004G157550 Sobic010G268900--Sobic004G157550 Sobic009G206300 Sobic009G206300 Sobic010G268900--Sobic009G206300 Sobic010G268900--Sobic010G012400 Sobic010G268900--Sobic002G278700 Sobic010G268900--Sobic008G030700 Sobic010G268900--Sobic009G009300 Sobic010G268900--Sobic003G173700 Sobic005G006701 Sobic005G006701 Sobic006G145600--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic006G145600--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic006G145600--Sobic004G089400 Sobic007G010350 Sobic007G010350 Sobic006G145600--Sobic007G010350 Sobic001G092700 Sobic001G092700 Sobic006G145600--Sobic001G092700 Sobic007G219300 Sobic007G219300 Sobic006G145600--Sobic007G219300 Sobic001G355300 Sobic001G355300 Sobic006G145600--Sobic001G355300 Sobic005G125400 Sobic005G125400 Sobic006G145600--Sobic005G125400 Sobic003G164300 Sobic003G164300 Sobic006G145600--Sobic003G164300 Sobic009G218900--Sobic008G030600 Sobic009G218900--Sobic009G070600 Sobic009G218900--Sobic009G070700 Sobic001G192100 Sobic001G192100 Sobic009G218900--Sobic001G192100 Sobic004G170200 Sobic004G170200 Sobic009G218900--Sobic004G170200 Sobic009G218900--Sobic003G173700 Sobic001G068600 Sobic001G068600 Sobic009G218900--Sobic001G068600 Sobic001G363700 Sobic001G363700 Sobic009G218900--Sobic001G363700 Sobic004G335500 Sobic004G335500 Sobic009G218900--Sobic004G335500 Sobic006G175700--Sobic005G190800 Sobic006G175700--Sobic008G030700 Sobic006G175700--Sobic002G278800 Sobic006G175700--Sobic003G007800 Sobic001G249500 Sobic001G249500 Sobic006G175700--Sobic001G249500 Sobic006G175700--Sobic001G338000 Sobic006G175700--Sobic002G128600 Sobic006G175700--Sobic003G131800 Sobic006G175700--Sobic002G278700
Octagon: transcription factors


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