Gene annotation
Transcriptome id Sobic.008G030600.1
Synonym LTP3, Sb08g002660
Functional annotation similar to Non-specific lipid-transfer protein (PubMedID : 29862293)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Protease inhibitor/seed storage/LTP( (PubMedID : 26759170,(PubMedID : 24597475)
LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1B6PBT7
Pfam PF00234
Panther DB PTHR33076 PTHR33076:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59320 : lipid transfer protein 3
RAP-DB (Rice) LOC_Os12g02340.1 : LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92550
Barley HORVU5Hr1G046520.1
Wheat -
Populus -


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cDNA sequences
Sobic.008G030600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G047900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@boron transporter protein, putative, expressed -
2 Sobic.006G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G218900 CPuORF26 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
4 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
5 Sobic.001G440000 ras-related protein, putative, expressed K07933: Rab-like protein 3
6 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
7 Sobic.009G009300 terpene synthase, putative, expressed -
8 Sobic.003G326700 glycosyl hydrolases family 17, putative, expressed -
9 Sobic.008G162300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
10 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
11 Sobic.002G207900 WAX2, putative, expressed -
12 Sobic.003G349100 plant-specific domain TIGR01589 family protein, expressed -
13 Sobic.001G518200 - K06928: nucleoside-triphosphatase
14 Sobic.002G135000 expressed protein -
15 Sobic.001G415700 expressed protein -
16 Sobic.002G013800 NB-ARC domain containing protein, expressed -
17 Sobic.008G130800 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
18 Sobic.002G226800 protein phosphotase protein, putative, expressed -
19 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.008G126500 - -


Gene co-expression network
sample Sobic008G030600 Sobic008G030600 Sobic003G047900 Sobic003G047900 Sobic008G030600--Sobic003G047900 Sobic006G086800 Sobic006G086800 Sobic008G030600--Sobic006G086800 Sobic009G218900 Sobic009G218900 Sobic008G030600--Sobic009G218900 Sobic009G070700 Sobic009G070700 Sobic008G030600--Sobic009G070700 Sobic001G440000 Sobic001G440000 Sobic008G030600--Sobic001G440000 Sobic006G145600 Sobic006G145600 Sobic008G030600--Sobic006G145600 Sobic009G009300 Sobic009G009300 Sobic008G030600--Sobic009G009300 Sobic003G326700 Sobic003G326700 Sobic008G030600--Sobic003G326700 Sobic008G162300 Sobic008G162300 Sobic008G030600--Sobic008G162300 Sobic003G047900--Sobic008G030600 Sobic003G047900--Sobic001G440000 Sobic003G047900--Sobic006G086800 Sobic001G518200 Sobic001G518200 Sobic003G047900--Sobic001G518200 Sobic003G047900--Sobic009G009300 Sobic008G075200 Sobic008G075200 Sobic003G047900--Sobic008G075200 Sobic010G147500 Sobic010G147500 Sobic003G047900--Sobic010G147500 Sobic009G231100 Sobic009G231100 Sobic003G047900--Sobic009G231100 Sobic003G047900--Sobic009G070700 Sobic008G130800 Sobic008G130800 Sobic006G086800--Sobic008G130800 Sobic004G162500 Sobic004G162500 Sobic006G086800--Sobic004G162500 Sobic006G086800--Sobic008G030600 Sobic006G086800--Sobic003G047900 Sobic009G130800 Sobic009G130800 Sobic006G086800--Sobic009G130800 Sobic003G149000 Sobic003G149000 Sobic006G086800--Sobic003G149000 Sobic001G285500 Sobic001G285500 Sobic006G086800--Sobic001G285500 Sobic006G086800--Sobic009G070700 Sobic007G090537 Sobic007G090537 Sobic006G086800--Sobic007G090537 Sobic009G218900--Sobic008G030600 Sobic009G070600 Sobic009G070600 Sobic009G218900--Sobic009G070600 Sobic009G218900--Sobic009G070700 Sobic001G192100 Sobic001G192100 Sobic009G218900--Sobic001G192100 Sobic004G170200 Sobic004G170200 Sobic009G218900--Sobic004G170200 Sobic003G173700 Sobic003G173700 Sobic009G218900--Sobic003G173700 Sobic001G068600 Sobic001G068600 Sobic009G218900--Sobic001G068600 Sobic001G363700 Sobic001G363700 Sobic009G218900--Sobic001G363700 Sobic004G335500 Sobic004G335500 Sobic009G218900--Sobic004G335500 Sobic009G070700--Sobic009G070600 Sobic003G007800 Sobic003G007800 Sobic009G070700--Sobic003G007800 Sobic006G175700 Sobic006G175700 Sobic009G070700--Sobic006G175700 Sobic001G255300 Sobic001G255300 Sobic009G070700--Sobic001G255300 Sobic005G029400 Sobic005G029400 Sobic009G070700--Sobic005G029400 Sobic005G190800 Sobic005G190800 Sobic009G070700--Sobic005G190800 Sobic008G189500 Sobic008G189500 Sobic009G070700--Sobic008G189500 Sobic004G328900 Sobic004G328900 Sobic009G070700--Sobic004G328900 Sobic002G128600 Sobic002G128600 Sobic009G070700--Sobic002G128600 Sobic002G239400 Sobic002G239400 Sobic001G440000--Sobic002G239400 Sobic010G153400 Sobic010G153400 Sobic001G440000--Sobic010G153400 Sobic009G066200 Sobic009G066200 Sobic001G440000--Sobic009G066200 Sobic004G298600 Sobic004G298600 Sobic001G440000--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic001G440000--Sobic001G131900 Sobic003G435300 Sobic003G435300 Sobic001G440000--Sobic003G435300 Sobic004G213400 Sobic004G213400 Sobic001G440000--Sobic004G213400 Sobic001G091701 Sobic001G091701 Sobic001G440000--Sobic001G091701 Sobic002G392400 Sobic002G392400 Sobic001G440000--Sobic002G392400 Sobic005G006701 Sobic005G006701 Sobic006G145600--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic006G145600--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic006G145600--Sobic004G089400 Sobic007G010350 Sobic007G010350 Sobic006G145600--Sobic007G010350 Sobic001G092700 Sobic001G092700 Sobic006G145600--Sobic001G092700 Sobic007G219300 Sobic007G219300 Sobic006G145600--Sobic007G219300 Sobic001G355300 Sobic001G355300 Sobic006G145600--Sobic001G355300 Sobic005G125400 Sobic005G125400 Sobic006G145600--Sobic005G125400 Sobic003G164300 Sobic003G164300 Sobic006G145600--Sobic003G164300 Sobic009G009300--Sobic009G070700 Sobic009G009300--Sobic003G173700 Sobic009G136500 Sobic009G136500 Sobic009G009300--Sobic009G136500 Sobic009G009300--Sobic003G047900 Sobic009G009300--Sobic008G030600 Sobic010G268900 Sobic010G268900 Sobic009G009300--Sobic010G268900 Sobic009G009300--Sobic006G145600 Sobic009G009300--Sobic009G218900 Sobic009G009300--Sobic006G175700 Sobic003G326700--Sobic006G145600 Sobic001G221200 Sobic001G221200 Sobic003G326700--Sobic001G221200 Sobic001G285600 Sobic001G285600 Sobic003G326700--Sobic001G285600 Sobic002G226800 Sobic002G226800 Sobic003G326700--Sobic002G226800 Sobic004G081900 Sobic004G081900 Sobic003G326700--Sobic004G081900 Sobic002G431700 Sobic002G431700 Sobic003G326700--Sobic002G431700 Sobic003G326700--Sobic008G030600 Sobic003G326700--Sobic006G086800 Sobic003G326700--Sobic008G130800 Sobic008G162300--Sobic010G153400 Sobic002G348400 Sobic002G348400 Sobic008G162300--Sobic002G348400 Sobic008G162300--Sobic001G440000 Sobic009G229400 Sobic009G229400 Sobic008G162300--Sobic009G229400 Sobic008G162300--Sobic009G066200 Sobic004G116400 Sobic004G116400 Sobic008G162300--Sobic004G116400 Sobic001G539400 Sobic001G539400 Sobic008G162300--Sobic001G539400 Sobic004G038400 Sobic004G038400 Sobic008G162300--Sobic004G038400 Sobic005G174750 Sobic005G174750 Sobic008G162300--Sobic005G174750
Octagon: transcription factors


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