Gene annotation
Transcriptome id Sobic.006G086800.1,Sobic.006G086800.2
Synonym Sb06g017270
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y8S1 , C5Y8R9
Pfam PF11705 PF02576 PF02576
Panther DB PTHR34544 PTHR34544:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006359; regulation of transcription by RNA polymerase III


Orthologs (automatic annotation)
TAIR AT1G77122 : Uncharacterised protein family UPF0090
RAP-DB (Rice) LOC_Os04g35760.1 : expressed protein
MaizeGDB (Corn) Zm00025a011305
Brachypodium KQJ82732
Barley HORVU2Hr1G076530.9 , HORVU2Hr1G076530.8 , HORVU2Hr1G076530.1 , HORVU2Hr1G076530.11 , HORVU2Hr1G076530.3 , HORVU2Hr1G076530.2 , HORVU2Hr1G076530.5 , HORVU2Hr1G076530.10 , HORVU2Hr1G076530.7 , HORVU2Hr1G076530.12 , HORVU2Hr1G076530.4 , HORVU2Hr1G076530.6
Wheat TraesCS2B02G323800 , TraesCS2B02G323800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G130800 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
2 Sobic.004G162500 SAM domain family protein, expressed -
3 Sobic.008G030600 similar to Non-specific lipid-transfer protein(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Protease inhibitor/seed storage/LTP("PubMedID : 26759170,PubMedID : 24597475")@LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.003G047900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@boron transporter protein, putative, expressed -
5 Sobic.009G130800 tat pathway signal sequence family protein, expressed -
6 Sobic.003G149000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.001G285500 - -
8 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
9 Sobic.007G090537 - K10956: protein transport protein SEC61 subunit alpha
10 Sobic.003G326700 glycosyl hydrolases family 17, putative, expressed -
11 Sobic.002G135000 expressed protein -
12 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
13 Sobic.003G044300 D-tyrosyl-tRNA, putative, expressed K07560: dtd, D-aminoacyl-tRNA deacylase
14 Sobic.001G178100 inositol-1-monophosphatase, putative, expressed K10047: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase
15 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
16 Sobic.001G285600 - -
17 Sobic.001G415700 expressed protein -
18 Sobic.010G130601 - -
19 Sobic.002G207900 WAX2, putative, expressed -
20 Sobic.003G349100 plant-specific domain TIGR01589 family protein, expressed -


Gene co-expression network
sample Sobic006G086800 Sobic006G086800 Sobic008G130800 Sobic008G130800 Sobic006G086800--Sobic008G130800 Sobic004G162500 Sobic004G162500 Sobic006G086800--Sobic004G162500 Sobic008G030600 Sobic008G030600 Sobic006G086800--Sobic008G030600 Sobic003G047900 Sobic003G047900 Sobic006G086800--Sobic003G047900 Sobic009G130800 Sobic009G130800 Sobic006G086800--Sobic009G130800 Sobic003G149000 Sobic003G149000 Sobic006G086800--Sobic003G149000 Sobic001G285500 Sobic001G285500 Sobic006G086800--Sobic001G285500 Sobic009G070700 Sobic009G070700 Sobic006G086800--Sobic009G070700 Sobic007G090537 Sobic007G090537 Sobic006G086800--Sobic007G090537 Sobic010G130601 Sobic010G130601 Sobic008G130800--Sobic010G130601 Sobic008G130800--Sobic006G086800 Sobic001G285600 Sobic001G285600 Sobic008G130800--Sobic001G285600 Sobic008G130800--Sobic001G285500 Sobic001G225900 Sobic001G225900 Sobic008G130800--Sobic001G225900 Sobic010G124900 Sobic010G124900 Sobic008G130800--Sobic010G124900 Sobic002G135000 Sobic002G135000 Sobic008G130800--Sobic002G135000 Sobic008G130800--Sobic004G162500 Sobic010G277700 Sobic010G277700 Sobic008G130800--Sobic010G277700 Sobic004G162500--Sobic006G086800 Sobic001G032200 Sobic001G032200 Sobic004G162500--Sobic001G032200 Sobic002G189600 Sobic002G189600 Sobic004G162500--Sobic002G189600 Sobic003G044300 Sobic003G044300 Sobic004G162500--Sobic003G044300 Sobic009G160500 Sobic009G160500 Sobic004G162500--Sobic009G160500 Sobic002G138300 Sobic002G138300 Sobic004G162500--Sobic002G138300 Sobic008G011300 Sobic008G011300 Sobic004G162500--Sobic008G011300 Sobic004G162500--Sobic008G130800 Sobic003G392600 Sobic003G392600 Sobic004G162500--Sobic003G392600 Sobic008G030600--Sobic003G047900 Sobic008G030600--Sobic006G086800 Sobic009G218900 Sobic009G218900 Sobic008G030600--Sobic009G218900 Sobic008G030600--Sobic009G070700 Sobic001G440000 Sobic001G440000 Sobic008G030600--Sobic001G440000 Sobic006G145600 Sobic006G145600 Sobic008G030600--Sobic006G145600 Sobic009G009300 Sobic009G009300 Sobic008G030600--Sobic009G009300 Sobic003G326700 Sobic003G326700 Sobic008G030600--Sobic003G326700 Sobic008G162300 Sobic008G162300 Sobic008G030600--Sobic008G162300 Sobic003G047900--Sobic008G030600 Sobic003G047900--Sobic001G440000 Sobic003G047900--Sobic006G086800 Sobic001G518200 Sobic001G518200 Sobic003G047900--Sobic001G518200 Sobic003G047900--Sobic009G009300 Sobic008G075200 Sobic008G075200 Sobic003G047900--Sobic008G075200 Sobic010G147500 Sobic010G147500 Sobic003G047900--Sobic010G147500 Sobic009G231100 Sobic009G231100 Sobic003G047900--Sobic009G231100 Sobic003G047900--Sobic009G070700 Sobic009G130800--Sobic007G090537 Sobic003G261200 Sobic003G261200 Sobic009G130800--Sobic003G261200 Sobic010G095200 Sobic010G095200 Sobic009G130800--Sobic010G095200 Sobic007G013400 Sobic007G013400 Sobic009G130800--Sobic007G013400 Sobic003G295800 Sobic003G295800 Sobic009G130800--Sobic003G295800 Sobic004G164100 Sobic004G164100 Sobic009G130800--Sobic004G164100 Sobic009G001500 Sobic009G001500 Sobic009G130800--Sobic009G001500 Sobic001G475600 Sobic001G475600 Sobic009G130800--Sobic001G475600 Sobic007G211100 Sobic007G211100 Sobic009G130800--Sobic007G211100 Sobic006G102800 Sobic006G102800 Sobic003G149000--Sobic006G102800 Sobic003G149000--Sobic006G086800 Sobic007G190200 Sobic007G190200 Sobic003G149000--Sobic007G190200 Sobic008G000100 Sobic008G000100 Sobic003G149000--Sobic008G000100 Sobic003G149000--Sobic009G070700 Sobic004G203900 Sobic004G203900 Sobic003G149000--Sobic004G203900 Sobic004G129100 Sobic004G129100 Sobic003G149000--Sobic004G129100 Sobic006G160700 Sobic006G160700 Sobic003G149000--Sobic006G160700 Sobic006G237200 Sobic006G237200 Sobic003G149000--Sobic006G237200 Sobic001G285500--Sobic001G285600 Sobic003G435300 Sobic003G435300 Sobic001G285500--Sobic003G435300 Sobic008G120920 Sobic008G120920 Sobic001G285500--Sobic008G120920 Sobic001G285500--Sobic008G130800 Sobic001G285500--Sobic010G130601 Sobic004G116400 Sobic004G116400 Sobic001G285500--Sobic004G116400 Sobic003G348100 Sobic003G348100 Sobic001G285500--Sobic003G348100 Sobic004G046800 Sobic004G046800 Sobic001G285500--Sobic004G046800 Sobic002G111100 Sobic002G111100 Sobic001G285500--Sobic002G111100 Sobic009G070600 Sobic009G070600 Sobic009G070700--Sobic009G070600 Sobic003G007800 Sobic003G007800 Sobic009G070700--Sobic003G007800 Sobic006G175700 Sobic006G175700 Sobic009G070700--Sobic006G175700 Sobic001G255300 Sobic001G255300 Sobic009G070700--Sobic001G255300 Sobic005G029400 Sobic005G029400 Sobic009G070700--Sobic005G029400 Sobic005G190800 Sobic005G190800 Sobic009G070700--Sobic005G190800 Sobic008G189500 Sobic008G189500 Sobic009G070700--Sobic008G189500 Sobic004G328900 Sobic004G328900 Sobic009G070700--Sobic004G328900 Sobic002G128600 Sobic002G128600 Sobic009G070700--Sobic002G128600 Sobic007G090537--Sobic009G130800 Sobic007G090537--Sobic010G095200 Sobic007G090537--Sobic003G261200 Sobic003G292300 Sobic003G292300 Sobic007G090537--Sobic003G292300 Sobic007G171800 Sobic007G171800 Sobic007G090537--Sobic007G171800 Sobic003G225100 Sobic003G225100 Sobic007G090537--Sobic003G225100 Sobic005G110481 Sobic005G110481 Sobic007G090537--Sobic005G110481 Sobic007G090537--Sobic004G164100 Sobic001G058400 Sobic001G058400 Sobic007G090537--Sobic001G058400
Octagon: transcription factors


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