Gene annotation
Transcriptome id Sobic.001G285600.1
Synonym
Functional annotation -
UniProt A0A1B6QLM8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G130601 - -
2 Sobic.003G179950 - -
3 Sobic.010G124900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
4 Sobic.001G285500 - -
5 Sobic.006G177700 uncharacterized mscS family protein, putative, expressed -
6 Sobic.004G046800 expressed protein -
7 Sobic.008G120920 - -
8 Sobic.006G117700 - -
9 Sobic.001G167600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.001G519600 - -
11 Sobic.009G061500 - -
12 Sobic.005G174750 - -
13 Sobic.001G225900 - -
14 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
15 Sobic.002G111100 expressed protein -
16 Sobic.008G055200 dirigent, putative, expressed -
17 Sobic.003G358600 similar to Phosphorylase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
18 Sobic.008G148600 B3 DNA binding domain containing protein, expressed -
19 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
20 Sobic.008G136601 - -


Gene co-expression network
sample Sobic001G285600 Sobic001G285600 Sobic010G130601 Sobic010G130601 Sobic001G285600--Sobic010G130601 Sobic003G179950 Sobic003G179950 Sobic001G285600--Sobic003G179950 Sobic010G124900 Sobic010G124900 Sobic001G285600--Sobic010G124900 Sobic001G285500 Sobic001G285500 Sobic001G285600--Sobic001G285500 Sobic006G177700 Sobic006G177700 Sobic001G285600--Sobic006G177700 Sobic004G046800 Sobic004G046800 Sobic001G285600--Sobic004G046800 Sobic008G120920 Sobic008G120920 Sobic001G285600--Sobic008G120920 Sobic006G117700 Sobic006G117700 Sobic001G285600--Sobic006G117700 Sobic001G167600 Sobic001G167600 Sobic001G285600--Sobic001G167600 Sobic010G130601--Sobic010G124900 Sobic010G130601--Sobic006G117700 Sobic001G405100 Sobic001G405100 Sobic010G130601--Sobic001G405100 Sobic002G111100 Sobic002G111100 Sobic010G130601--Sobic002G111100 Sobic010G130601--Sobic001G167600 Sobic010G130601--Sobic006G177700 Sobic003G024100 Sobic003G024100 Sobic010G130601--Sobic003G024100 Sobic008G136601 Sobic008G136601 Sobic010G130601--Sobic008G136601 Sobic006G001100 Sobic006G001100 Sobic010G130601--Sobic006G001100 Sobic002G150932 Sobic002G150932 Sobic003G179950--Sobic002G150932 Sobic001G248700 Sobic001G248700 Sobic003G179950--Sobic001G248700 Sobic001G094700 Sobic001G094700 Sobic003G179950--Sobic001G094700 Sobic010G124900--Sobic002G111100 Sobic001G106800 Sobic001G106800 Sobic010G124900--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G124900--Sobic006G204400 Sobic008G103250 Sobic008G103250 Sobic010G124900--Sobic008G103250 Sobic010G124900--Sobic001G167600 Sobic005G170300 Sobic005G170300 Sobic010G124900--Sobic005G170300 Sobic001G254000 Sobic001G254000 Sobic010G124900--Sobic001G254000 Sobic002G030300 Sobic002G030300 Sobic010G124900--Sobic002G030300 Sobic002G372000 Sobic002G372000 Sobic010G124900--Sobic002G372000 Sobic001G285500--Sobic001G285600 Sobic003G435300 Sobic003G435300 Sobic001G285500--Sobic003G435300 Sobic001G285500--Sobic008G120920 Sobic008G130800 Sobic008G130800 Sobic001G285500--Sobic008G130800 Sobic001G285500--Sobic010G130601 Sobic004G116400 Sobic004G116400 Sobic001G285500--Sobic004G116400 Sobic003G348100 Sobic003G348100 Sobic001G285500--Sobic003G348100 Sobic001G285500--Sobic004G046800 Sobic001G285500--Sobic002G111100 Sobic008G076100 Sobic008G076100 Sobic006G177700--Sobic008G076100 Sobic004G036400 Sobic004G036400 Sobic006G177700--Sobic004G036400 Sobic001G002400 Sobic001G002400 Sobic006G177700--Sobic001G002400 Sobic008G059700 Sobic008G059700 Sobic006G177700--Sobic008G059700 Sobic008G056700 Sobic008G056700 Sobic006G177700--Sobic008G056700 Sobic003G175000 Sobic003G175000 Sobic006G177700--Sobic003G175000 Sobic008G025400 Sobic008G025400 Sobic006G177700--Sobic008G025400 Sobic006G177700--Sobic001G248700 Sobic001G170000 Sobic001G170000 Sobic006G177700--Sobic001G170000 Sobic008G055200 Sobic008G055200 Sobic004G046800--Sobic008G055200 Sobic001G194800 Sobic001G194800 Sobic004G046800--Sobic001G194800 Sobic004G046800--Sobic001G106800 Sobic002G192800 Sobic002G192800 Sobic004G046800--Sobic002G192800 Sobic004G046800--Sobic008G120920 Sobic008G029800 Sobic008G029800 Sobic004G046800--Sobic008G029800 Sobic004G046800--Sobic010G124900 Sobic001G117100 Sobic001G117100 Sobic004G046800--Sobic001G117100 Sobic008G030501 Sobic008G030501 Sobic004G046800--Sobic008G030501 Sobic008G120920--Sobic002G111100 Sobic008G120920--Sobic008G055200 Sobic008G120920--Sobic004G046800 Sobic005G002100 Sobic005G002100 Sobic008G120920--Sobic005G002100 Sobic003G244400 Sobic003G244400 Sobic008G120920--Sobic003G244400 Sobic005G136100 Sobic005G136100 Sobic008G120920--Sobic005G136100 Sobic001G103100 Sobic001G103100 Sobic008G120920--Sobic001G103100 Sobic003G290500 Sobic003G290500 Sobic008G120920--Sobic003G290500 Sobic004G358000 Sobic004G358000 Sobic008G120920--Sobic004G358000 Sobic004G082800 Sobic004G082800 Sobic006G117700--Sobic004G082800 Sobic010G202200 Sobic010G202200 Sobic006G117700--Sobic010G202200 Sobic006G117700--Sobic001G405100 Sobic003G156900 Sobic003G156900 Sobic006G117700--Sobic003G156900 Sobic006G027601 Sobic006G027601 Sobic006G117700--Sobic006G027601 Sobic005G110424 Sobic005G110424 Sobic006G117700--Sobic005G110424 Sobic006G117700--Sobic006G001100 Sobic001G340800 Sobic001G340800 Sobic006G117700--Sobic001G340800 Sobic009G061500 Sobic009G061500 Sobic006G117700--Sobic009G061500 Sobic001G167600--Sobic010G124900 Sobic001G167600--Sobic006G204400 Sobic001G167600--Sobic001G106800 Sobic001G167600--Sobic002G111100 Sobic006G097400 Sobic006G097400 Sobic001G167600--Sobic006G097400 Sobic001G156800 Sobic001G156800 Sobic001G167600--Sobic001G156800 Sobic006G095700 Sobic006G095700 Sobic001G167600--Sobic006G095700 Sobic001G167600--Sobic008G103250 Sobic001G167600--Sobic002G030300
Octagon: transcription factors


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