Gene annotation
Transcriptome id Sobic.003G326700.3,Sobic.003G326700.1,Sobic.003G326700.2
Synonym PR2, PR-2, BG2, Sb03g037270, BGL2
Functional annotation glycosyl hydrolases family 17, putative, expressed
UniProt A0A1B6Q6L9 , C5XMH3 , A0A1W0W036
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G57270 : beta-1,3-glucanase 1
RAP-DB (Rice) LOC_Os01g58730.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a026062 , Zm00025a026061 , Zm00025a039842 , Zm00025a044100 , Zm00025a036936 , Zm00025a037858
Brachypodium KQK19723 , KQK05606 , KQK11484 , KQK10191
Barley HORVU3Hr1G078520.1 , HORVU3Hr1G078520.3 , HORVU3Hr1G078520.2 , HORVU7Hr1G120450.5 , HORVU1Hr1G067460.6 , HORVU1Hr1G067460.4 , HORVU1Hr1G067460.5 , HORVU1Hr1G067460.2 , HORVU1Hr1G067460.1 , HORVU1Hr1G067460.3 , HORVU7Hr1G120450.3 , HORVU7Hr1G120450.2 , HORVU7Hr1G120450.1 , HORVU7Hr1G120450.4
Wheat TraesCS3D02G478800 , TraesCS3B02G529700 , TraesCS7D02G329400 , TraesCS3A02G330500 , TraesCS3B02G360500 , TraesCS3B02G360500 , TraesCS7D02G552500 , TraesCS3A02G483000 , TraesCS3B02G529300 , TraesCS3B02G529100 , TraesCS1A02G312700 , TraesCS1A02G312700 , TraesCS3D02G323900 , TraesCS3D02G477700 , TraesCS1D02G312800 , TraesCS1D02G312800 , TraesCS3D02G478300 , TraesCS7B02G233500 , TraesCS3D02G478000 , TraesCS1B02G324300 , TraesCS1B02G324300 , TraesCS7A02G349200 , TraesCS3D02G478900 , TraesCS3A02G483700 , TraesCS3B02G530500 , TraesCS3B02G530600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
2 Sobic.001G221200 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
3 Sobic.001G285600 - -
4 Sobic.002G226800 protein phosphotase protein, putative, expressed -
5 Sobic.004G081900 OsSub12 - Putative Subtilisin homologue, expressed -
6 Sobic.002G431700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
7 Sobic.008G030600 similar to Non-specific lipid-transfer protein(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Protease inhibitor/seed storage/LTP("PubMedID : 26759170,PubMedID : 24597475")@LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.008G130800 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
10 Sobic.008G124600 expressed protein -
11 Sobic.002G138300 expressed protein -
12 Sobic.003G102100 expressed protein -
13 Sobic.004G162500 SAM domain family protein, expressed -
14 Sobic.010G123100 transporter-related, putative, expressed -
15 Sobic.003G047900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@boron transporter protein, putative, expressed -
16 Sobic.008G163900 OsFBX358 - F-box domain containing protein, expressed -
17 Sobic.004G270300 - -
18 Sobic.001G285500 - -
19 Sobic.010G130601 - -
20 Sobic.002G135000 expressed protein -


Gene co-expression network
sample Sobic003G326700 Sobic003G326700 Sobic006G145600 Sobic006G145600 Sobic003G326700--Sobic006G145600 Sobic001G221200 Sobic001G221200 Sobic003G326700--Sobic001G221200 Sobic001G285600 Sobic001G285600 Sobic003G326700--Sobic001G285600 Sobic002G226800 Sobic002G226800 Sobic003G326700--Sobic002G226800 Sobic004G081900 Sobic004G081900 Sobic003G326700--Sobic004G081900 Sobic002G431700 Sobic002G431700 Sobic003G326700--Sobic002G431700 Sobic008G030600 Sobic008G030600 Sobic003G326700--Sobic008G030600 Sobic006G086800 Sobic006G086800 Sobic003G326700--Sobic006G086800 Sobic008G130800 Sobic008G130800 Sobic003G326700--Sobic008G130800 Sobic005G006701 Sobic005G006701 Sobic006G145600--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic006G145600--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic006G145600--Sobic004G089400 Sobic007G010350 Sobic007G010350 Sobic006G145600--Sobic007G010350 Sobic001G092700 Sobic001G092700 Sobic006G145600--Sobic001G092700 Sobic007G219300 Sobic007G219300 Sobic006G145600--Sobic007G219300 Sobic001G355300 Sobic001G355300 Sobic006G145600--Sobic001G355300 Sobic005G125400 Sobic005G125400 Sobic006G145600--Sobic005G125400 Sobic003G164300 Sobic003G164300 Sobic006G145600--Sobic003G164300 Sobic003G045700 Sobic003G045700 Sobic001G221200--Sobic003G045700 Sobic010G231600 Sobic010G231600 Sobic001G221200--Sobic010G231600 Sobic001G023500 Sobic001G023500 Sobic001G221200--Sobic001G023500 Sobic009G153400 Sobic009G153400 Sobic001G221200--Sobic009G153400 Sobic001G221200--Sobic003G326700 Sobic001G250200 Sobic001G250200 Sobic001G221200--Sobic001G250200 Sobic009G031400 Sobic009G031400 Sobic001G221200--Sobic009G031400 Sobic004G028900 Sobic004G028900 Sobic001G221200--Sobic004G028900 Sobic002G382500 Sobic002G382500 Sobic001G221200--Sobic002G382500 Sobic010G130601 Sobic010G130601 Sobic001G285600--Sobic010G130601 Sobic003G179950 Sobic003G179950 Sobic001G285600--Sobic003G179950 Sobic010G124900 Sobic010G124900 Sobic001G285600--Sobic010G124900 Sobic001G285500 Sobic001G285500 Sobic001G285600--Sobic001G285500 Sobic006G177700 Sobic006G177700 Sobic001G285600--Sobic006G177700 Sobic004G046800 Sobic004G046800 Sobic001G285600--Sobic004G046800 Sobic008G120920 Sobic008G120920 Sobic001G285600--Sobic008G120920 Sobic006G117700 Sobic006G117700 Sobic001G285600--Sobic006G117700 Sobic001G167600 Sobic001G167600 Sobic001G285600--Sobic001G167600 Sobic004G145701 Sobic004G145701 Sobic002G226800--Sobic004G145701 Sobic006G265800 Sobic006G265800 Sobic002G226800--Sobic006G265800 Sobic008G124600 Sobic008G124600 Sobic002G226800--Sobic008G124600 Sobic005G050400 Sobic005G050400 Sobic002G226800--Sobic005G050400 Sobic008G071800 Sobic008G071800 Sobic002G226800--Sobic008G071800 Sobic001G112600 Sobic001G112600 Sobic002G226800--Sobic001G112600 Sobic003G018000 Sobic003G018000 Sobic002G226800--Sobic003G018000 Sobic003G102100 Sobic003G102100 Sobic002G226800--Sobic003G102100 Sobic004G007400 Sobic004G007400 Sobic002G226800--Sobic004G007400 Sobic002G123400 Sobic002G123400 Sobic004G081900--Sobic002G123400 Sobic008G071700 Sobic008G071700 Sobic004G081900--Sobic008G071700 Sobic005G006900 Sobic005G006900 Sobic004G081900--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic004G081900--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic004G081900--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic004G081900--Sobic005G212300 Sobic003G354850 Sobic003G354850 Sobic004G081900--Sobic003G354850 Sobic004G254700 Sobic004G254700 Sobic004G081900--Sobic004G254700 Sobic002G019300 Sobic002G019300 Sobic004G081900--Sobic002G019300 Sobic002G431700--Sobic006G145600 Sobic001G050300 Sobic001G050300 Sobic002G431700--Sobic001G050300 Sobic010G200900 Sobic010G200900 Sobic002G431700--Sobic010G200900 Sobic002G431700--Sobic003G326700 Sobic002G431700--Sobic004G089400 Sobic001G266200 Sobic001G266200 Sobic002G431700--Sobic001G266200 Sobic002G431700--Sobic005G006701 Sobic002G431700--Sobic005G125400 Sobic001G510200 Sobic001G510200 Sobic002G431700--Sobic001G510200 Sobic003G047900 Sobic003G047900 Sobic008G030600--Sobic003G047900 Sobic008G030600--Sobic006G086800 Sobic009G218900 Sobic009G218900 Sobic008G030600--Sobic009G218900 Sobic009G070700 Sobic009G070700 Sobic008G030600--Sobic009G070700 Sobic001G440000 Sobic001G440000 Sobic008G030600--Sobic001G440000 Sobic008G030600--Sobic006G145600 Sobic009G009300 Sobic009G009300 Sobic008G030600--Sobic009G009300 Sobic008G030600--Sobic003G326700 Sobic008G162300 Sobic008G162300 Sobic008G030600--Sobic008G162300 Sobic006G086800--Sobic008G130800 Sobic004G162500 Sobic004G162500 Sobic006G086800--Sobic004G162500 Sobic006G086800--Sobic008G030600 Sobic006G086800--Sobic003G047900 Sobic009G130800 Sobic009G130800 Sobic006G086800--Sobic009G130800 Sobic003G149000 Sobic003G149000 Sobic006G086800--Sobic003G149000 Sobic006G086800--Sobic001G285500 Sobic006G086800--Sobic009G070700 Sobic007G090537 Sobic007G090537 Sobic006G086800--Sobic007G090537 Sobic008G130800--Sobic010G130601 Sobic008G130800--Sobic006G086800 Sobic008G130800--Sobic001G285600 Sobic008G130800--Sobic001G285500 Sobic001G225900 Sobic001G225900 Sobic008G130800--Sobic001G225900 Sobic008G130800--Sobic010G124900 Sobic002G135000 Sobic002G135000 Sobic008G130800--Sobic002G135000 Sobic008G130800--Sobic004G162500 Sobic010G277700 Sobic010G277700 Sobic008G130800--Sobic010G277700
Octagon: transcription factors


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