Gene annotation
Transcriptome id Sobic.009G119800.2
Synonym Sb09g018790
Functional annotation GASR5 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed
UniProt A0A1Z5R296
Pfam PF02704
Panther DB PTHR23201 PTHR23201:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74670 : Gibberellin-regulated family protein
RAP-DB (Rice) LOC_Os05g31280.1 : GASR5 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a043506 , Zm00025a053745
Brachypodium PNT64563 , KQJ90233 , PNT76076
Barley HORVU1Hr1G057570.3 , HORVU1Hr1G057570.2 , HORVU5Hr1G065670.1 , HORVU5Hr1G065670.2 , HORVU7Hr1G042390.3 , HORVU7Hr1G042390.2 , HORVU7Hr1G042390.7 , HORVU7Hr1G042390.6 , HORVU7Hr1G042390.5 , HORVU7Hr1G042390.4
Wheat TraesCS7A02G208100 , TraesCS7D02G210500 , TraesCS7B02G115300
Populus PNT29690


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381000 - -
2 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
3 Sobic.001G534200 - -
4 Sobic.008G018100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
5 Sobic.006G083900 PHD-finger domain containing protein, expressed -
6 Sobic.005G126701 - -
7 Sobic.001G254800 cytochrome P450, putative, expressed -
8 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
9 Sobic.006G234433 - -
10 Sobic.001G298032 - -
11 Sobic.004G134801 - -
12 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
13 Sobic.007G025600 amino acid transporter, putative, expressed -
14 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
15 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
17 Sobic.001G122600 expressed protein -
18 Sobic.001G122600 expressed protein -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic009G119800 Sobic009G119800 Sobic001G381000 Sobic001G381000 Sobic009G119800--Sobic001G381000 Sobic002G240000 Sobic002G240000 Sobic009G119800--Sobic002G240000 Sobic001G534200 Sobic001G534200 Sobic009G119800--Sobic001G534200 Sobic008G018100 Sobic008G018100 Sobic009G119800--Sobic008G018100 Sobic006G083900 Sobic006G083900 Sobic009G119800--Sobic006G083900 Sobic005G126701 Sobic005G126701 Sobic009G119800--Sobic005G126701 Sobic001G254800 Sobic001G254800 Sobic009G119800--Sobic001G254800 Sobic005G021000 Sobic005G021000 Sobic009G119800--Sobic005G021000 Sobic006G234433 Sobic006G234433 Sobic009G119800--Sobic006G234433 Sobic001G381000--Sobic001G534200 Sobic003G372600 Sobic003G372600 Sobic001G381000--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G381000--Sobic001G208500 Sobic001G166900 Sobic001G166900 Sobic001G381000--Sobic001G166900 Sobic006G167700 Sobic006G167700 Sobic001G381000--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic001G381000--Sobic002G184700 Sobic001G344300 Sobic001G344300 Sobic001G381000--Sobic001G344300 Sobic009G103800 Sobic009G103800 Sobic001G381000--Sobic009G103800 Sobic002G393100 Sobic002G393100 Sobic001G381000--Sobic002G393100 Sobic002G240000--Sobic005G021000 Sobic002G240000--Sobic001G254800 Sobic002G240000--Sobic001G534200 Sobic008G149300 Sobic008G149300 Sobic002G240000--Sobic008G149300 Sobic009G246250 Sobic009G246250 Sobic002G240000--Sobic009G246250 Sobic002G240000--Sobic006G083900 Sobic010G053400 Sobic010G053400 Sobic002G240000--Sobic010G053400 Sobic007G025600 Sobic007G025600 Sobic002G240000--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic002G240000--Sobic004G349550 Sobic001G534200--Sobic006G167700 Sobic001G534200--Sobic002G184700 Sobic001G534200--Sobic009G103800 Sobic001G534200--Sobic001G166900 Sobic001G534200--Sobic001G344300 Sobic001G534200--Sobic003G372600 Sobic001G534200--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic001G534200--Sobic002G211300 Sobic010G198900 Sobic010G198900 Sobic001G534200--Sobic010G198900 Sobic008G018100--Sobic006G083900 Sobic008G018100--Sobic006G234433 Sobic008G018100--Sobic008G149300 Sobic008G018100--Sobic007G025600 Sobic008G018100--Sobic004G349550 Sobic008G018100--Sobic005G126701 Sobic001G122600 Sobic001G122600 Sobic008G018100--Sobic001G122600 Sobic006G083900--Sobic006G234433 Sobic006G083900--Sobic008G149300 Sobic006G083900--Sobic004G349550 Sobic006G083900--Sobic010G053400 Sobic006G083900--Sobic001G122600 Sobic005G126701--Sobic001G254800 Sobic005G126701--Sobic006G083900 Sobic005G126701--Sobic007G025600 Sobic005G126701--Sobic001G534200 Sobic005G126701--Sobic006G234433 Sobic005G126701--Sobic009G103800 Sobic005G126701--Sobic001G166900 Sobic005G126701--Sobic004G349550 Sobic005G126701--Sobic006G167700 Sobic001G254800--Sobic007G025600 Sobic001G254800--Sobic009G103800 Sobic001G254800--Sobic006G167700 Sobic001G254800--Sobic002G184700 Sobic001G254800--Sobic001G344300 Sobic001G254800--Sobic004G349550 Sobic001G254800--Sobic001G534200 Sobic001G254800--Sobic010G198900 Sobic001G254800--Sobic001G166900 Sobic005G021000--Sobic001G254800 Sobic006G217800 Sobic006G217800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic005G021000--Sobic007G025600 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic005G021000--Sobic009G103800 Sobic005G021000--Sobic006G167700 Sobic005G021000--Sobic001G166900 Sobic006G234433--Sobic001G122600
Octagon: transcription factors


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