Gene annotation
Transcriptome id Sobic.009G196100.1
Synonym Sb09g025450
Functional annotation dof zinc finger domain containing protein, putative, expressed
UniProt A0A1Z5R3D7
Pfam PF02701
Panther DB PTHR31089
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G34140 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os01g55340.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037944 , Zm00025a006998 , Zm00025a040930 , Zm00025a028085 , Zm00025a038256 , Zm00025a040004 , Zm00025a016425 , Zm00025a038795 , Zm00025a017812 , Zm00025a027510 , Zm00025a044220
Brachypodium KQK07701 , KQK11789 , KQK09823 , PNT70923 , KQJ86253 , KQJ96615
Barley HORVU3Hr1G061840.2 , HORVU3Hr1G061840.3 , HORVU5Hr1G113220.3 , HORVU1Hr1G076800.1 , HORVU3Hr1G116220.1 , HORVU5Hr1G113190.1 , HORVU5Hr1G113190.2 , HORVU3Hr1G116220.2 , HORVU5Hr1G113220.1 , HORVU5Hr1G113220.2 , HORVU5Hr1G113220.4 , HORVU5Hr1G113220.5 , HORVU5Hr1G113220.6 , HORVU1Hr1G005390.4 , HORVU3Hr1G072970.1 , HORVU1Hr1G005390.1 , HORVU1Hr1G005390.2 , HORVU1Hr1G005390.3 , HORVU3Hr1G116260.1 , HORVU3Hr1G116260.2
Wheat TraesCS3D02G537400 , TraesCS1A02G035200 , TraesCS5A02G078100 , TraesCS5A02G078100 , TraesCS5D02G493000 , TraesCS5D02G093800 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS5B02G492600 , TraesCS5D02G093800 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS3A02G532000 , TraesCS1D02G036700 , TraesCS1D02G036700 , TraesCS3B02G608800 , TraesCS5A02G479400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G060001 - -
2 Sobic.007G120600 KED, putative, expressed -
3 Sobic.002G078600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.007G007650 - -
5 Sobic.004G052700 hypothetical protein -
6 Sobic.008G096401 - -
7 Sobic.003G326100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
8 Sobic.010G267651 - -
9 Sobic.010G146350 - -
10 Sobic.003G023100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
11 Sobic.005G207600 - -
12 Sobic.010G065500 BHLH transcription factor, putative, expressed -
13 Sobic.010G228200 expressed protein -
14 Sobic.006G042800 expressed protein -
15 Sobic.002G188800 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
16 Sobic.008G055650 - -
17 Sobic.006G088500 OsFBX135 - F-box domain containing protein, expressed -
18 Sobic.003G021401 - -
19 Sobic.004G181100 expressed protein -
20 Sobic.002G303950 - -


Gene co-expression network
sample Sobic009G196100 Sobic009G196100 Sobic001G060001 Sobic001G060001 Sobic009G196100--Sobic001G060001 Sobic007G120600 Sobic007G120600 Sobic009G196100--Sobic007G120600 Sobic002G078600 Sobic002G078600 Sobic009G196100--Sobic002G078600 Sobic007G007650 Sobic007G007650 Sobic009G196100--Sobic007G007650 Sobic004G052700 Sobic004G052700 Sobic009G196100--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic009G196100--Sobic008G096401 Sobic003G326100 Sobic003G326100 Sobic009G196100--Sobic003G326100 Sobic010G267651 Sobic010G267651 Sobic009G196100--Sobic010G267651 Sobic010G146350 Sobic010G146350 Sobic009G196100--Sobic010G146350 Sobic001G060001--Sobic007G120600 Sobic001G060001--Sobic004G052700 Sobic001G060001--Sobic008G096401 Sobic001G060001--Sobic010G146350 Sobic005G207600 Sobic005G207600 Sobic001G060001--Sobic005G207600 Sobic010G228200 Sobic010G228200 Sobic001G060001--Sobic010G228200 Sobic004G181100 Sobic004G181100 Sobic001G060001--Sobic004G181100 Sobic001G060001--Sobic010G267651 Sobic006G042800 Sobic006G042800 Sobic001G060001--Sobic006G042800 Sobic007G120600--Sobic004G052700 Sobic007G120600--Sobic008G096401 Sobic007G120600--Sobic001G060001 Sobic007G120600--Sobic010G146350 Sobic007G120600--Sobic005G207600 Sobic007G120600--Sobic010G267651 Sobic007G120600--Sobic004G181100 Sobic007G120600--Sobic010G228200 Sobic002G188800 Sobic002G188800 Sobic007G120600--Sobic002G188800 Sobic002G303950 Sobic002G303950 Sobic002G078600--Sobic002G303950 Sobic002G078600--Sobic003G326100 Sobic002G078600--Sobic009G196100 Sobic002G078600--Sobic001G060001 Sobic003G391700 Sobic003G391700 Sobic002G078600--Sobic003G391700 Sobic008G078966 Sobic008G078966 Sobic002G078600--Sobic008G078966 Sobic008G024000 Sobic008G024000 Sobic002G078600--Sobic008G024000 Sobic002G078600--Sobic010G146350 Sobic002G078600--Sobic005G207600 Sobic007G007650--Sobic004G052700 Sobic007G007650--Sobic008G096401 Sobic007G007650--Sobic007G120600 Sobic007G007650--Sobic001G060001 Sobic007G007650--Sobic004G181100 Sobic007G007650--Sobic006G042800 Sobic007G007650--Sobic010G146350 Sobic007G007650--Sobic010G267651 Sobic007G007650--Sobic002G188800 Sobic004G052700--Sobic008G096401 Sobic004G052700--Sobic007G120600 Sobic004G052700--Sobic001G060001 Sobic004G052700--Sobic004G181100 Sobic004G052700--Sobic006G042800 Sobic004G052700--Sobic010G267651 Sobic004G052700--Sobic002G188800 Sobic004G052700--Sobic010G146350 Sobic002G159400 Sobic002G159400 Sobic004G052700--Sobic002G159400 Sobic008G096401--Sobic004G052700 Sobic008G096401--Sobic007G120600 Sobic008G096401--Sobic001G060001 Sobic008G096401--Sobic004G181100 Sobic008G096401--Sobic006G042800 Sobic008G096401--Sobic010G267651 Sobic008G096401--Sobic002G188800 Sobic008G096401--Sobic010G146350 Sobic008G096401--Sobic002G159400 Sobic003G326100--Sobic002G188800 Sobic003G326100--Sobic001G060001 Sobic003G326100--Sobic004G181100 Sobic003G326100--Sobic008G096401 Sobic003G326100--Sobic004G052700 Sobic003G326100--Sobic007G120600 Sobic002G401301 Sobic002G401301 Sobic003G326100--Sobic002G401301 Sobic003G326100--Sobic006G042800 Sobic003G326100--Sobic002G159400 Sobic010G267651--Sobic002G188800 Sobic010G267651--Sobic007G120600 Sobic010G267651--Sobic008G096401 Sobic010G267651--Sobic004G052700 Sobic010G267651--Sobic004G181100 Sobic010G267651--Sobic001G060001 Sobic010G267651--Sobic006G042800 Sobic006G077900 Sobic006G077900 Sobic010G267651--Sobic006G077900 Sobic010G267651--Sobic002G159400 Sobic010G146350--Sobic005G207600 Sobic010G146350--Sobic010G228200 Sobic010G146350--Sobic007G120600 Sobic010G146350--Sobic001G060001 Sobic001G190600 Sobic001G190600 Sobic010G146350--Sobic001G190600 Sobic005G207550 Sobic005G207550 Sobic010G146350--Sobic005G207550 Sobic010G146350--Sobic004G052700 Sobic010G146350--Sobic008G096401 Sobic006G137900 Sobic006G137900 Sobic010G146350--Sobic006G137900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.