Gene annotation
Transcriptome id Sobic.010G048000.1
Synonym Sb10g004200
Functional annotation expressed protein
UniProt A0A194YIC9
Pfam PF04601
Panther DB PTHR31205:SF3 PTHR31205
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27100 : Actin cross-linking protein
RAP-DB (Rice) LOC_Os06g06670.1 : expressed protein
MaizeGDB (Corn) Zm00025a049945
Brachypodium PNT76498
Barley -
Wheat TraesCS7D02G071000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G472400 pumilio domain-containing protein PPD1, putative, expressed -
2 Sobic.001G102600 regulatory protein, putative, expressed -
3 Sobic.010G189366 - K01674: carbonic anhydrase
4 Sobic.004G349150 - -
5 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
6 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -
7 Sobic.004G001700 POEI25 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
8 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
9 Sobic.005G090000 expressed protein -
10 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
11 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.005G226500 thaumatin family domain containing protein, expressed -
13 Sobic.003G004900 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
14 Sobic.003G271700 - -
15 Sobic.005G226600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.006G006900 expressed protein -
17 Sobic.006G006800 expressed protein -
18 Sobic.006G098300 alpha/beta hydrolase fold, putative, expressed -
19 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G048000 Sobic010G048000 Sobic001G472400 Sobic001G472400 Sobic010G048000--Sobic001G472400 Sobic001G102600 Sobic001G102600 Sobic010G048000--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic010G048000--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic010G048000--Sobic004G349150 Sobic009G046000 Sobic009G046000 Sobic010G048000--Sobic009G046000 Sobic006G267400 Sobic006G267400 Sobic010G048000--Sobic006G267400 Sobic004G001700 Sobic004G001700 Sobic010G048000--Sobic004G001700 Sobic010G187400 Sobic010G187400 Sobic010G048000--Sobic010G187400 Sobic005G090000 Sobic005G090000 Sobic010G048000--Sobic005G090000 Sobic001G472400--Sobic010G189366 Sobic001G472400--Sobic001G102600 Sobic001G472400--Sobic004G349150 Sobic001G472400--Sobic004G001700 Sobic001G472400--Sobic006G267400 Sobic001G472400--Sobic010G187400 Sobic010G259400 Sobic010G259400 Sobic001G472400--Sobic010G259400 Sobic004G202800 Sobic004G202800 Sobic001G472400--Sobic004G202800 Sobic008G032400 Sobic008G032400 Sobic001G472400--Sobic008G032400 Sobic001G102600--Sobic010G189366 Sobic001G102600--Sobic004G349150 Sobic001G102600--Sobic006G267400 Sobic001G102600--Sobic004G001700 Sobic001G102600--Sobic010G187400 Sobic003G004900 Sobic003G004900 Sobic001G102600--Sobic003G004900 Sobic006G098300 Sobic006G098300 Sobic001G102600--Sobic006G098300 Sobic001G102600--Sobic008G032400 Sobic001G102600--Sobic001G472400 Sobic010G189366--Sobic004G349150 Sobic010G189366--Sobic001G102600 Sobic010G189366--Sobic004G001700 Sobic010G189366--Sobic010G187400 Sobic010G189366--Sobic008G032400 Sobic006G006900 Sobic006G006900 Sobic010G189366--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G189366--Sobic002G270400 Sobic001G133200 Sobic001G133200 Sobic010G189366--Sobic001G133200 Sobic004G349150--Sobic010G189366 Sobic004G349150--Sobic010G187400 Sobic004G349150--Sobic004G001700 Sobic004G349150--Sobic008G032400 Sobic004G349150--Sobic006G006900 Sobic004G349150--Sobic002G270400 Sobic003G263800 Sobic003G263800 Sobic004G349150--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic004G349150--Sobic002G427550 Sobic004G349150--Sobic001G133200 Sobic002G410600 Sobic002G410600 Sobic009G046000--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic009G046000--Sobic003G038700 Sobic007G000600 Sobic007G000600 Sobic009G046000--Sobic007G000600 Sobic007G206000 Sobic007G206000 Sobic009G046000--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic009G046000--Sobic010G236000 Sobic009G046000--Sobic008G032400 Sobic005G200700 Sobic005G200700 Sobic009G046000--Sobic005G200700 Sobic007G037400 Sobic007G037400 Sobic009G046000--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic009G046000--Sobic007G107500 Sobic006G267400--Sobic006G098300 Sobic007G180700 Sobic007G180700 Sobic006G267400--Sobic007G180700 Sobic006G267400--Sobic002G270400 Sobic006G267400--Sobic004G349150 Sobic002G399600 Sobic002G399600 Sobic006G267400--Sobic002G399600 Sobic006G267400--Sobic010G187400 Sobic006G267400--Sobic004G001700 Sobic006G267400--Sobic006G006900 Sobic006G267400--Sobic008G032400 Sobic004G001700--Sobic010G187400 Sobic004G001700--Sobic006G006900 Sobic004G001700--Sobic002G270400 Sobic004G001700--Sobic008G032400 Sobic007G098600 Sobic007G098600 Sobic004G001700--Sobic007G098600 Sobic004G001700--Sobic002G427550 Sobic004G001700--Sobic001G133200 Sobic010G187400--Sobic006G006900 Sobic010G187400--Sobic007G037400 Sobic010G187400--Sobic007G107500 Sobic010G187400--Sobic007G098600 Sobic010G187400--Sobic002G270400 Sobic010G187400--Sobic008G032400 Sobic010G187400--Sobic001G133200 Sobic001G511600 Sobic001G511600 Sobic005G090000--Sobic001G511600 Sobic005G090000--Sobic010G048000 Sobic005G090000--Sobic001G472400 Sobic001G472301 Sobic001G472301 Sobic005G090000--Sobic001G472301 Sobic005G090000--Sobic001G102600 Sobic003G011700 Sobic003G011700 Sobic005G090000--Sobic003G011700 Sobic005G090000--Sobic010G189366 Sobic002G179200 Sobic002G179200 Sobic005G090000--Sobic002G179200 Sobic005G090000--Sobic004G202800
Octagon: transcription factors


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