Gene annotation
Transcriptome id Sobic.010G222400.3,Sobic.010G222400.1,Sobic.010G222400.4,Sobic.010G222400.2
Synonym BPM1, Sb10g026770, ATBPM1
Functional annotation MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5Z7P2
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF178
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os06g14060.2,LOC_Os06g14060.1 : MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a041954 , Zm00025a041956 , Zm00025a041957 , Zm00025a041960
Brachypodium KQK17054
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G118800 expressed protein -
2 Sobic.010G136400 - -
3 Sobic.007G101900 - -
4 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G197300 kinase, putative, expressed -
6 Sobic.007G100032 - -
7 Sobic.008G121400 expressed protein -
8 Sobic.006G063400 proteasome subunit, putative, expressed -
9 Sobic.002G327400 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.008G076500 - -
11 Sobic.003G060100 expressed protein -
12 Sobic.005G223450 - -
13 Sobic.001G487500 expressed protein -
14 Sobic.005G066600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.008G112900 OsFBX452 - F-box domain containing protein, expressed -
16 Sobic.002G251100 ternary complex factor MIP1, putative, expressed -
17 Sobic.008G092932 - -
18 Sobic.008G104100 - -
19 Sobic.010G110266 - -
20 Sobic.001G086000 COBRA, putative, expressed -


Gene co-expression network
sample Sobic010G222400 Sobic010G222400 Sobic008G118800 Sobic008G118800 Sobic010G222400--Sobic008G118800 Sobic010G136400 Sobic010G136400 Sobic010G222400--Sobic010G136400 Sobic007G101900 Sobic007G101900 Sobic010G222400--Sobic007G101900 Sobic010G149700 Sobic010G149700 Sobic010G222400--Sobic010G149700 Sobic001G197300 Sobic001G197300 Sobic010G222400--Sobic001G197300 Sobic007G100032 Sobic007G100032 Sobic010G222400--Sobic007G100032 Sobic008G121400 Sobic008G121400 Sobic010G222400--Sobic008G121400 Sobic006G063400 Sobic006G063400 Sobic010G222400--Sobic006G063400 Sobic002G327400 Sobic002G327400 Sobic010G222400--Sobic002G327400 Sobic008G118800--Sobic010G222400 Sobic006G002100 Sobic006G002100 Sobic008G118800--Sobic006G002100 Sobic008G118800--Sobic010G149700 Sobic010G028200 Sobic010G028200 Sobic008G118800--Sobic010G028200 Sobic006G067800 Sobic006G067800 Sobic008G118800--Sobic006G067800 Sobic004G274900 Sobic004G274900 Sobic008G118800--Sobic004G274900 Sobic004G071650 Sobic004G071650 Sobic008G118800--Sobic004G071650 Sobic005G229300 Sobic005G229300 Sobic008G118800--Sobic005G229300 Sobic009G242400 Sobic009G242400 Sobic008G118800--Sobic009G242400 Sobic010G136400--Sobic007G101900 Sobic010G136400--Sobic001G197300 Sobic010G136400--Sobic006G063400 Sobic010G136400--Sobic008G121400 Sobic010G136400--Sobic007G100032 Sobic008G104100 Sobic008G104100 Sobic010G136400--Sobic008G104100 Sobic010G110266 Sobic010G110266 Sobic010G136400--Sobic010G110266 Sobic008G092932 Sobic008G092932 Sobic010G136400--Sobic008G092932 Sobic004G135000 Sobic004G135000 Sobic010G136400--Sobic004G135000 Sobic007G101900--Sobic010G136400 Sobic007G101900--Sobic008G121400 Sobic007G101900--Sobic006G063400 Sobic007G101900--Sobic001G197300 Sobic007G101900--Sobic008G092932 Sobic007G101900--Sobic007G100032 Sobic007G101900--Sobic008G104100 Sobic007G101900--Sobic010G110266 Sobic002G156900 Sobic002G156900 Sobic007G101900--Sobic002G156900 Sobic010G149700--Sobic004G071650 Sobic005G179200 Sobic005G179200 Sobic010G149700--Sobic005G179200 Sobic010G238900 Sobic010G238900 Sobic010G149700--Sobic010G238900 Sobic010G149700--Sobic010G110266 Sobic003G116800 Sobic003G116800 Sobic010G149700--Sobic003G116800 Sobic006G153100 Sobic006G153100 Sobic010G149700--Sobic006G153100 Sobic010G149700--Sobic010G136400 Sobic001G050100 Sobic001G050100 Sobic010G149700--Sobic001G050100 Sobic010G149700--Sobic006G063400 Sobic001G197300--Sobic010G136400 Sobic001G197300--Sobic007G100032 Sobic001G197300--Sobic006G063400 Sobic001G197300--Sobic007G101900 Sobic004G094900 Sobic004G094900 Sobic001G197300--Sobic004G094900 Sobic001G197300--Sobic008G104100 Sobic001G065900 Sobic001G065900 Sobic001G197300--Sobic001G065900 Sobic001G197300--Sobic004G135000 Sobic001G381400 Sobic001G381400 Sobic001G197300--Sobic001G381400 Sobic007G100032--Sobic001G197300 Sobic007G100032--Sobic004G094900 Sobic007G100032--Sobic010G136400 Sobic007G100032--Sobic001G381400 Sobic007G100032--Sobic001G065900 Sobic007G100032--Sobic006G063400 Sobic008G079500 Sobic008G079500 Sobic007G100032--Sobic008G079500 Sobic003G060100 Sobic003G060100 Sobic007G100032--Sobic003G060100 Sobic007G100032--Sobic007G101900 Sobic008G121400--Sobic007G101900 Sobic008G121400--Sobic008G092932 Sobic008G121400--Sobic010G136400 Sobic008G121400--Sobic006G063400 Sobic008G121400--Sobic010G110266 Sobic008G121400--Sobic001G197300 Sobic005G188200 Sobic005G188200 Sobic008G121400--Sobic005G188200 Sobic008G121400--Sobic002G156900 Sobic008G122700 Sobic008G122700 Sobic008G121400--Sobic008G122700 Sobic006G063400--Sobic010G136400 Sobic006G063400--Sobic001G197300 Sobic006G063400--Sobic007G101900 Sobic006G063400--Sobic007G100032 Sobic006G063400--Sobic008G121400 Sobic006G063400--Sobic010G110266 Sobic006G063400--Sobic008G104100 Sobic008G112900 Sobic008G112900 Sobic006G063400--Sobic008G112900 Sobic006G063400--Sobic001G065900 Sobic003G112400 Sobic003G112400 Sobic002G327400--Sobic003G112400 Sobic002G327400--Sobic003G060100 Sobic002G327201 Sobic002G327201 Sobic002G327400--Sobic002G327201 Sobic001G487500 Sobic001G487500 Sobic002G327400--Sobic001G487500 Sobic001G086000 Sobic001G086000 Sobic002G327400--Sobic001G086000 Sobic002G238600 Sobic002G238600 Sobic002G327400--Sobic002G238600 Sobic010G135100 Sobic010G135100 Sobic002G327400--Sobic010G135100 Sobic002G234400 Sobic002G234400 Sobic002G327400--Sobic002G234400 Sobic008G077550 Sobic008G077550 Sobic002G327400--Sobic008G077550
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.