Gene annotation
Transcriptome id Sobic.008G118800.1
Synonym Sb08g017250
Functional annotation expressed protein
UniProt C5YPE7
Pfam -
Panther DB PTHR34681 PTHR34681:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15790 : -
RAP-DB (Rice) LOC_Os12g35620.1 : expressed protein
MaizeGDB (Corn) Zm00025a025536
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G118800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G222400 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
2 Sobic.006G002100 phosphoglycerate mutase, putative, expressed -
3 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
5 Sobic.006G067800 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
6 Sobic.004G274900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
7 Sobic.004G071650 - -
8 Sobic.005G229300 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
9 Sobic.009G242400 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
10 Sobic.006G063400 proteasome subunit, putative, expressed -
11 Sobic.001G487300 expressed protein -
12 Sobic.009G101700 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
13 Sobic.009G054000 expressed protein -
14 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
15 Sobic.001G487500 expressed protein -
16 Sobic.001G014500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
17 Sobic.007G016100 - -
18 Sobic.010G212800 expressed protein -
19 Sobic.009G242300 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
20 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e


Gene co-expression network
sample Sobic008G118800 Sobic008G118800 Sobic010G222400 Sobic010G222400 Sobic008G118800--Sobic010G222400 Sobic006G002100 Sobic006G002100 Sobic008G118800--Sobic006G002100 Sobic010G149700 Sobic010G149700 Sobic008G118800--Sobic010G149700 Sobic010G028200 Sobic010G028200 Sobic008G118800--Sobic010G028200 Sobic006G067800 Sobic006G067800 Sobic008G118800--Sobic006G067800 Sobic004G274900 Sobic004G274900 Sobic008G118800--Sobic004G274900 Sobic004G071650 Sobic004G071650 Sobic008G118800--Sobic004G071650 Sobic005G229300 Sobic005G229300 Sobic008G118800--Sobic005G229300 Sobic009G242400 Sobic009G242400 Sobic008G118800--Sobic009G242400 Sobic010G222400--Sobic008G118800 Sobic010G136400 Sobic010G136400 Sobic010G222400--Sobic010G136400 Sobic007G101900 Sobic007G101900 Sobic010G222400--Sobic007G101900 Sobic010G222400--Sobic010G149700 Sobic001G197300 Sobic001G197300 Sobic010G222400--Sobic001G197300 Sobic007G100032 Sobic007G100032 Sobic010G222400--Sobic007G100032 Sobic008G121400 Sobic008G121400 Sobic010G222400--Sobic008G121400 Sobic006G063400 Sobic006G063400 Sobic010G222400--Sobic006G063400 Sobic002G327400 Sobic002G327400 Sobic010G222400--Sobic002G327400 Sobic002G183100 Sobic002G183100 Sobic006G002100--Sobic002G183100 Sobic007G016100 Sobic007G016100 Sobic006G002100--Sobic007G016100 Sobic006G036500 Sobic006G036500 Sobic006G002100--Sobic006G036500 Sobic006G107200 Sobic006G107200 Sobic006G002100--Sobic006G107200 Sobic006G038800 Sobic006G038800 Sobic006G002100--Sobic006G038800 Sobic004G037000 Sobic004G037000 Sobic006G002100--Sobic004G037000 Sobic001G248500 Sobic001G248500 Sobic006G002100--Sobic001G248500 Sobic002G156900 Sobic002G156900 Sobic006G002100--Sobic002G156900 Sobic001G348700 Sobic001G348700 Sobic006G002100--Sobic001G348700 Sobic010G149700--Sobic004G071650 Sobic005G179200 Sobic005G179200 Sobic010G149700--Sobic005G179200 Sobic010G238900 Sobic010G238900 Sobic010G149700--Sobic010G238900 Sobic010G110266 Sobic010G110266 Sobic010G149700--Sobic010G110266 Sobic003G116800 Sobic003G116800 Sobic010G149700--Sobic003G116800 Sobic006G153100 Sobic006G153100 Sobic010G149700--Sobic006G153100 Sobic010G149700--Sobic010G136400 Sobic001G050100 Sobic001G050100 Sobic010G149700--Sobic001G050100 Sobic010G149700--Sobic006G063400 Sobic003G209000 Sobic003G209000 Sobic010G028200--Sobic003G209000 Sobic010G065900 Sobic010G065900 Sobic010G028200--Sobic010G065900 Sobic002G418400 Sobic002G418400 Sobic010G028200--Sobic002G418400 Sobic001G404800 Sobic001G404800 Sobic010G028200--Sobic001G404800 Sobic003G436700 Sobic003G436700 Sobic010G028200--Sobic003G436700 Sobic004G055700 Sobic004G055700 Sobic010G028200--Sobic004G055700 Sobic003G160700 Sobic003G160700 Sobic010G028200--Sobic003G160700 Sobic004G008400 Sobic004G008400 Sobic010G028200--Sobic004G008400 Sobic002G136700 Sobic002G136700 Sobic010G028200--Sobic002G136700 Sobic002G200600 Sobic002G200600 Sobic006G067800--Sobic002G200600 Sobic002G081600 Sobic002G081600 Sobic006G067800--Sobic002G081600 Sobic001G402050 Sobic001G402050 Sobic006G067800--Sobic001G402050 Sobic006G116700 Sobic006G116700 Sobic006G067800--Sobic006G116700 Sobic009G050300 Sobic009G050300 Sobic006G067800--Sobic009G050300 Sobic009G215200 Sobic009G215200 Sobic006G067800--Sobic009G215200 Sobic007G197800 Sobic007G197800 Sobic006G067800--Sobic007G197800 Sobic006G067800--Sobic003G436700 Sobic001G130301 Sobic001G130301 Sobic006G067800--Sobic001G130301 Sobic001G368800 Sobic001G368800 Sobic004G274900--Sobic001G368800 Sobic008G025600 Sobic008G025600 Sobic004G274900--Sobic008G025600 Sobic005G080900 Sobic005G080900 Sobic004G274900--Sobic005G080900 Sobic004G217450 Sobic004G217450 Sobic004G274900--Sobic004G217450 Sobic010G023800 Sobic010G023800 Sobic004G274900--Sobic010G023800 Sobic008G112600 Sobic008G112600 Sobic004G274900--Sobic008G112600 Sobic005G084600 Sobic005G084600 Sobic004G274900--Sobic005G084600 Sobic006G159600 Sobic006G159600 Sobic004G274900--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic004G274900--Sobic002G385400 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic003G286600 Sobic003G286600 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic005G206601 Sobic005G206601 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic002G379500 Sobic002G379500 Sobic005G229300--Sobic002G379500 Sobic001G533500 Sobic001G533500 Sobic005G229300--Sobic001G533500 Sobic007G018300 Sobic007G018300 Sobic005G229300--Sobic007G018300 Sobic001G483100 Sobic001G483100 Sobic005G229300--Sobic001G483100 Sobic003G109600 Sobic003G109600 Sobic005G229300--Sobic003G109600 Sobic003G249700 Sobic003G249700 Sobic005G229300--Sobic003G249700 Sobic009G223300 Sobic009G223300 Sobic005G229300--Sobic009G223300 Sobic007G019000 Sobic007G019000 Sobic005G229300--Sobic007G019000 Sobic007G019400 Sobic007G019400 Sobic005G229300--Sobic007G019400 Sobic006G213000 Sobic006G213000 Sobic009G242400--Sobic006G213000 Sobic001G226500 Sobic001G226500 Sobic009G242400--Sobic001G226500 Sobic006G137100 Sobic006G137100 Sobic009G242400--Sobic006G137100 Sobic003G387900 Sobic003G387900 Sobic009G242400--Sobic003G387900 Sobic009G242400--Sobic002G081600 Sobic003G346600 Sobic003G346600 Sobic009G242400--Sobic003G346600 Sobic004G280700 Sobic004G280700 Sobic009G242400--Sobic004G280700 Sobic009G242400--Sobic006G067800 Sobic009G242400--Sobic009G050300
Octagon: transcription factors


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