Gene annotation
Transcriptome id Sobic.007G016100.1
Synonym
Functional annotation -
UniProt A0A1B6PEZ2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G002100 phosphoglycerate mutase, putative, expressed -
2 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
4 Sobic.001G487300 expressed protein -
5 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
6 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
7 Sobic.002G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G071650 - -
9 Sobic.001G348700 - -
10 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.005G016700 DUF567 domain containing protein, putative, expressed -
12 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
13 Sobic.006G107200 molybdopterin biosynthesis protein CNX3, putative, expressed K03639: moaA, GTP 3',8-cyclase
14 Sobic.006G207000 expressed protein -
15 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.005G206601 - -
17 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
18 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
19 Sobic.009G125850 - -
20 Sobic.006G148900 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase


Gene co-expression network
sample Sobic007G016100 Sobic007G016100 Sobic006G002100 Sobic006G002100 Sobic007G016100--Sobic006G002100 Sobic010G084700 Sobic010G084700 Sobic007G016100--Sobic010G084700 Sobic004G221500 Sobic004G221500 Sobic007G016100--Sobic004G221500 Sobic001G487300 Sobic001G487300 Sobic007G016100--Sobic001G487300 Sobic001G513300 Sobic001G513300 Sobic007G016100--Sobic001G513300 Sobic004G037000 Sobic004G037000 Sobic007G016100--Sobic004G037000 Sobic002G183100 Sobic002G183100 Sobic007G016100--Sobic002G183100 Sobic004G071650 Sobic004G071650 Sobic007G016100--Sobic004G071650 Sobic001G348700 Sobic001G348700 Sobic007G016100--Sobic001G348700 Sobic006G002100--Sobic002G183100 Sobic006G002100--Sobic007G016100 Sobic006G036500 Sobic006G036500 Sobic006G002100--Sobic006G036500 Sobic006G107200 Sobic006G107200 Sobic006G002100--Sobic006G107200 Sobic006G038800 Sobic006G038800 Sobic006G002100--Sobic006G038800 Sobic006G002100--Sobic004G037000 Sobic001G248500 Sobic001G248500 Sobic006G002100--Sobic001G248500 Sobic002G156900 Sobic002G156900 Sobic006G002100--Sobic002G156900 Sobic006G002100--Sobic001G348700 Sobic010G084700--Sobic004G221500 Sobic010G084100 Sobic010G084100 Sobic010G084700--Sobic010G084100 Sobic010G117900 Sobic010G117900 Sobic010G084700--Sobic010G117900 Sobic002G184200 Sobic002G184200 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic010G084700--Sobic001G348700 Sobic001G423800 Sobic001G423800 Sobic010G084700--Sobic001G423800 Sobic001G192200 Sobic001G192200 Sobic010G084700--Sobic001G192200 Sobic004G221500--Sobic010G084700 Sobic006G084600 Sobic006G084600 Sobic004G221500--Sobic006G084600 Sobic004G221500--Sobic001G348700 Sobic004G221500--Sobic002G184200 Sobic004G221500--Sobic001G423800 Sobic004G221500--Sobic010G084100 Sobic003G252800 Sobic003G252800 Sobic004G221500--Sobic003G252800 Sobic004G221500--Sobic003G286600 Sobic004G221500--Sobic010G117900 Sobic001G403000 Sobic001G403000 Sobic001G487300--Sobic001G403000 Sobic001G487300--Sobic004G221500 Sobic001G487300--Sobic006G084600 Sobic009G240600 Sobic009G240600 Sobic001G487300--Sobic009G240600 Sobic001G487300--Sobic010G084700 Sobic001G487300--Sobic001G348700 Sobic005G206601 Sobic005G206601 Sobic001G487300--Sobic005G206601 Sobic001G487300--Sobic004G071650 Sobic001G476500 Sobic001G476500 Sobic001G487300--Sobic001G476500 Sobic003G273000 Sobic003G273000 Sobic001G513300--Sobic003G273000 Sobic004G228700 Sobic004G228700 Sobic001G513300--Sobic004G228700 Sobic001G513300--Sobic007G016100 Sobic001G308700 Sobic001G308700 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic002G136700 Sobic002G136700 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic002G362000 Sobic002G362000 Sobic001G513300--Sobic002G362000 Sobic007G155200 Sobic007G155200 Sobic004G037000--Sobic007G155200 Sobic002G361100 Sobic002G361100 Sobic004G037000--Sobic002G361100 Sobic010G084600 Sobic010G084600 Sobic004G037000--Sobic010G084600 Sobic004G037000--Sobic002G184200 Sobic004G037000--Sobic010G084700 Sobic009G224100 Sobic009G224100 Sobic004G037000--Sobic009G224100 Sobic004G037000--Sobic004G221500 Sobic006G207000 Sobic006G207000 Sobic004G037000--Sobic006G207000 Sobic010G196600 Sobic010G196600 Sobic004G037000--Sobic010G196600 Sobic008G140300 Sobic008G140300 Sobic002G183100--Sobic008G140300 Sobic002G183100--Sobic001G348700 Sobic002G183100--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G183100--Sobic007G067400 Sobic002G183100--Sobic010G084700 Sobic002G183100--Sobic001G487300 Sobic002G183100--Sobic004G037000 Sobic002G183100--Sobic002G184200 Sobic002G182500 Sobic002G182500 Sobic002G183100--Sobic002G182500 Sobic004G071650--Sobic010G084100 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G071650--Sobic004G221500 Sobic004G071650--Sobic005G206601 Sobic004G071650--Sobic001G487300 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic001G348700--Sobic010G117900 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic006G099900 Sobic006G099900 Sobic001G348700--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic001G348700--Sobic001G317200
Octagon: transcription factors


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