Gene annotation
Transcriptome id Sobic.005G066600.1
Synonym Sb05g005650
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5Y6K7
Pfam -
Panther DB PTHR33548 PTHR33548:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31640.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012780 , Zm00025a012777 , Zm00025a012766 , Zm00025a012769 , Zm00025a012779
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G086000 COBRA, putative, expressed -
2 Sobic.005G223450 - -
3 Sobic.002G327400 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.004G121700 expansin precursor, putative, expressed -
5 Sobic.010G151200 GRF zinc finger family protein, expressed -
6 Sobic.003G112400 expressed protein -
7 Sobic.003G405300 regulatory protein, putative, expressed -
8 Sobic.002G327201 - -
9 Sobic.010G135100 expressed protein -
10 Sobic.002G368901 - -
11 Sobic.008G076500 - -
12 Sobic.002G326500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.002G032400 OsFBX237 - F-box domain containing protein, expressed -
14 Sobic.007G094300 tetraspanin family protein, putative, expressed -
15 Sobic.006G277800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.005G166800 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
17 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
18 Sobic.001G487500 expressed protein -
19 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
20 Sobic.003G251600 S-locus-like receptor protein kinase, putative, expressed -


Gene co-expression network
sample Sobic005G066600 Sobic005G066600 Sobic001G086000 Sobic001G086000 Sobic005G066600--Sobic001G086000 Sobic005G223450 Sobic005G223450 Sobic005G066600--Sobic005G223450 Sobic002G327400 Sobic002G327400 Sobic005G066600--Sobic002G327400 Sobic004G121700 Sobic004G121700 Sobic005G066600--Sobic004G121700 Sobic010G151200 Sobic010G151200 Sobic005G066600--Sobic010G151200 Sobic003G112400 Sobic003G112400 Sobic005G066600--Sobic003G112400 Sobic003G405300 Sobic003G405300 Sobic005G066600--Sobic003G405300 Sobic002G327201 Sobic002G327201 Sobic005G066600--Sobic002G327201 Sobic010G135100 Sobic010G135100 Sobic005G066600--Sobic010G135100 Sobic001G086000--Sobic005G223450 Sobic001G086000--Sobic002G327400 Sobic001G086000--Sobic005G066600 Sobic001G086000--Sobic003G112400 Sobic008G029400 Sobic008G029400 Sobic001G086000--Sobic008G029400 Sobic006G277800 Sobic006G277800 Sobic001G086000--Sobic006G277800 Sobic006G104700 Sobic006G104700 Sobic001G086000--Sobic006G104700 Sobic001G086000--Sobic004G121700 Sobic001G086000--Sobic003G405300 Sobic005G223450--Sobic001G086000 Sobic005G223450--Sobic005G066600 Sobic005G223450--Sobic008G029400 Sobic005G223450--Sobic002G327400 Sobic005G223450--Sobic006G277800 Sobic005G223450--Sobic004G121700 Sobic001G197300 Sobic001G197300 Sobic005G223450--Sobic001G197300 Sobic005G223450--Sobic006G104700 Sobic005G223450--Sobic003G112400 Sobic002G327400--Sobic003G112400 Sobic003G060100 Sobic003G060100 Sobic002G327400--Sobic003G060100 Sobic002G327400--Sobic002G327201 Sobic001G487500 Sobic001G487500 Sobic002G327400--Sobic001G487500 Sobic002G327400--Sobic001G086000 Sobic002G238600 Sobic002G238600 Sobic002G327400--Sobic002G238600 Sobic002G327400--Sobic010G135100 Sobic002G234400 Sobic002G234400 Sobic002G327400--Sobic002G234400 Sobic008G077550 Sobic008G077550 Sobic002G327400--Sobic008G077550 Sobic007G094300 Sobic007G094300 Sobic004G121700--Sobic007G094300 Sobic004G121700--Sobic006G277800 Sobic005G110406 Sobic005G110406 Sobic004G121700--Sobic005G110406 Sobic002G099451 Sobic002G099451 Sobic004G121700--Sobic002G099451 Sobic004G121700--Sobic003G405300 Sobic006G072201 Sobic006G072201 Sobic004G121700--Sobic006G072201 Sobic008G068300 Sobic008G068300 Sobic004G121700--Sobic008G068300 Sobic004G121700--Sobic006G104700 Sobic005G166700 Sobic005G166700 Sobic004G121700--Sobic005G166700 Sobic003G015300 Sobic003G015300 Sobic010G151200--Sobic003G015300 Sobic007G165400 Sobic007G165400 Sobic010G151200--Sobic007G165400 Sobic004G126700 Sobic004G126700 Sobic010G151200--Sobic004G126700 Sobic005G043000 Sobic005G043000 Sobic010G151200--Sobic005G043000 Sobic010G110800 Sobic010G110800 Sobic010G151200--Sobic010G110800 Sobic001G108000 Sobic001G108000 Sobic010G151200--Sobic001G108000 Sobic007G170300 Sobic007G170300 Sobic010G151200--Sobic007G170300 Sobic002G185800 Sobic002G185800 Sobic010G151200--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic010G151200--Sobic005G046700 Sobic003G112400--Sobic003G060100 Sobic003G112400--Sobic010G135100 Sobic003G112400--Sobic002G238600 Sobic003G112400--Sobic006G104700 Sobic003G112400--Sobic001G487500 Sobic003G112400--Sobic002G327400 Sobic003G112400--Sobic002G234400 Sobic001G232500 Sobic001G232500 Sobic003G112400--Sobic001G232500 Sobic002G390000 Sobic002G390000 Sobic003G112400--Sobic002G390000 Sobic002G123500 Sobic002G123500 Sobic003G405300--Sobic002G123500 Sobic003G399700 Sobic003G399700 Sobic003G405300--Sobic003G399700 Sobic003G405300--Sobic005G110406 Sobic001G430100 Sobic001G430100 Sobic003G405300--Sobic001G430100 Sobic003G405300--Sobic006G277800 Sobic004G029100 Sobic004G029100 Sobic003G405300--Sobic004G029100 Sobic003G405300--Sobic008G068300 Sobic007G090460 Sobic007G090460 Sobic003G405300--Sobic007G090460 Sobic010G088800 Sobic010G088800 Sobic003G405300--Sobic010G088800 Sobic002G327201--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G327201--Sobic001G397300 Sobic002G250000 Sobic002G250000 Sobic002G327201--Sobic002G250000 Sobic007G006300 Sobic007G006300 Sobic002G327201--Sobic007G006300 Sobic002G327201--Sobic001G487500 Sobic010G029700 Sobic010G029700 Sobic002G327201--Sobic010G029700 Sobic001G190100 Sobic001G190100 Sobic002G327201--Sobic001G190100 Sobic002G327201--Sobic002G327400 Sobic004G086400 Sobic004G086400 Sobic002G327201--Sobic004G086400 Sobic010G135100--Sobic005G110406 Sobic005G180500 Sobic005G180500 Sobic010G135100--Sobic005G180500 Sobic010G135100--Sobic002G234400 Sobic010G135100--Sobic003G112400 Sobic004G229400 Sobic004G229400 Sobic010G135100--Sobic004G229400 Sobic010G135100--Sobic002G238600 Sobic010G135100--Sobic006G277800 Sobic010G135100--Sobic001G487500 Sobic010G135100--Sobic007G090460
Octagon: transcription factors


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