Gene annotation
Transcriptome id Sobic.001G004901.1
Synonym -
Functional annotation -
UniProt C5WRX3
Pfam -
Panther DB PTHR32370 PTHR32370:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009638; phototropism GO:0004871obsolete signal transducer activity


Orthologs (automatic annotation)
TAIR AT2G30520 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os12g02530.2 : BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
MaizeGDB (Corn) Zm00025a013176 , Zm00025a053790
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G427201 - -
2 Sobic.002G262500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@osFTL4 FT-Like4 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
3 Sobic.003G396400 harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.003G292800 expressed protein -
5 Sobic.002G375600 expressed protein -
6 Sobic.010G183900 expressed protein -
7 Sobic.002G189350 - -
8 Sobic.001G065400 - -
9 Sobic.004G341500 O-methyltransferase, putative, expressed -
10 Sobic.002G429200 expressed protein -
11 Sobic.006G242600 RIPER9 - Ripening-related family protein precursor, putative, expressed -
12 Sobic.002G426600 expressed protein -
13 Sobic.007G031000 X8 domain containing protein, expressed -
14 Sobic.002G295550 - -
15 Sobic.007G173901 - -
16 Sobic.010G251800 DUF617 domain containing protein, expressed -
17 Sobic.009G221701 - -
18 Sobic.005G106800 - -
19 Sobic.010G217466 - -
20 Sobic.010G149900 - -


Gene co-expression network
sample Sobic001G004901 Sobic001G004901 Sobic002G427201 Sobic002G427201 Sobic001G004901--Sobic002G427201 Sobic002G262500 Sobic002G262500 Sobic001G004901--Sobic002G262500 Sobic003G396400 Sobic003G396400 Sobic001G004901--Sobic003G396400 Sobic003G292800 Sobic003G292800 Sobic001G004901--Sobic003G292800 Sobic002G375600 Sobic002G375600 Sobic001G004901--Sobic002G375600 Sobic010G183900 Sobic010G183900 Sobic001G004901--Sobic010G183900 Sobic002G189350 Sobic002G189350 Sobic001G004901--Sobic002G189350 Sobic001G065400 Sobic001G065400 Sobic001G004901--Sobic001G065400 Sobic004G341500 Sobic004G341500 Sobic001G004901--Sobic004G341500 Sobic002G427201--Sobic002G262500 Sobic001G396550 Sobic001G396550 Sobic002G427201--Sobic001G396550 Sobic006G242600 Sobic006G242600 Sobic002G427201--Sobic006G242600 Sobic002G427201--Sobic001G004901 Sobic002G427201--Sobic003G396400 Sobic010G217466 Sobic010G217466 Sobic002G427201--Sobic010G217466 Sobic002G427201--Sobic002G375600 Sobic002G429200 Sobic002G429200 Sobic002G427201--Sobic002G429200 Sobic009G221701 Sobic009G221701 Sobic002G427201--Sobic009G221701 Sobic002G262500--Sobic002G427201 Sobic007G173901 Sobic007G173901 Sobic002G262500--Sobic007G173901 Sobic008G086100 Sobic008G086100 Sobic002G262500--Sobic008G086100 Sobic002G262500--Sobic006G242600 Sobic002G262500--Sobic010G217466 Sobic005G027032 Sobic005G027032 Sobic002G262500--Sobic005G027032 Sobic002G262500--Sobic009G221701 Sobic001G062400 Sobic001G062400 Sobic002G262500--Sobic001G062400 Sobic002G262500--Sobic002G429200 Sobic010G149900 Sobic010G149900 Sobic003G396400--Sobic010G149900 Sobic003G396400--Sobic006G242600 Sobic002G410050 Sobic002G410050 Sobic003G396400--Sobic002G410050 Sobic006G214101 Sobic006G214101 Sobic003G396400--Sobic006G214101 Sobic005G106800 Sobic005G106800 Sobic003G396400--Sobic005G106800 Sobic009G165050 Sobic009G165050 Sobic003G396400--Sobic009G165050 Sobic003G396400--Sobic009G221701 Sobic003G396400--Sobic010G217466 Sobic007G056400 Sobic007G056400 Sobic003G396400--Sobic007G056400 Sobic003G292800--Sobic002G429200 Sobic003G292800--Sobic002G375600 Sobic003G292800--Sobic005G106800 Sobic001G060666 Sobic001G060666 Sobic003G292800--Sobic001G060666 Sobic003G299400 Sobic003G299400 Sobic003G292800--Sobic003G299400 Sobic003G292800--Sobic002G189350 Sobic005G230600 Sobic005G230600 Sobic003G292800--Sobic005G230600 Sobic010G074960 Sobic010G074960 Sobic003G292800--Sobic010G074960 Sobic009G004000 Sobic009G004000 Sobic003G292800--Sobic009G004000 Sobic002G375600--Sobic002G429200 Sobic007G031000 Sobic007G031000 Sobic002G375600--Sobic007G031000 Sobic002G375600--Sobic005G230600 Sobic002G375600--Sobic003G292800 Sobic009G005750 Sobic009G005750 Sobic002G375600--Sobic009G005750 Sobic002G375600--Sobic002G189350 Sobic002G295550 Sobic002G295550 Sobic002G375600--Sobic002G295550 Sobic004G071401 Sobic004G071401 Sobic002G375600--Sobic004G071401 Sobic002G003900 Sobic002G003900 Sobic002G375600--Sobic002G003900 Sobic010G183900--Sobic001G004901 Sobic010G183900--Sobic002G375600 Sobic001G227601 Sobic001G227601 Sobic010G183900--Sobic001G227601 Sobic002G208301 Sobic002G208301 Sobic010G183900--Sobic002G208301 Sobic001G204400 Sobic001G204400 Sobic010G183900--Sobic001G204400 Sobic010G183900--Sobic002G427201 Sobic008G024700 Sobic008G024700 Sobic010G183900--Sobic008G024700 Sobic010G183900--Sobic004G341500 Sobic004G258450 Sobic004G258450 Sobic010G183900--Sobic004G258450 Sobic002G189350--Sobic005G230600 Sobic002G189350--Sobic002G429200 Sobic002G189350--Sobic002G375600 Sobic002G189350--Sobic003G292800 Sobic002G189350--Sobic004G071401 Sobic002G189350--Sobic005G106800 Sobic002G189350--Sobic009G221701 Sobic002G189350--Sobic003G299400 Sobic002G189350--Sobic006G242600 Sobic002G426600 Sobic002G426600 Sobic001G065400--Sobic002G426600 Sobic002G315450 Sobic002G315450 Sobic001G065400--Sobic002G315450 Sobic001G065400--Sobic001G004901 Sobic010G184201 Sobic010G184201 Sobic001G065400--Sobic010G184201 Sobic001G065400--Sobic002G262500 Sobic001G065400--Sobic002G427201 Sobic001G065400--Sobic002G189350 Sobic004G045100 Sobic004G045100 Sobic001G065400--Sobic004G045100 Sobic001G104050 Sobic001G104050 Sobic001G065400--Sobic001G104050 Sobic004G084800 Sobic004G084800 Sobic004G341500--Sobic004G084800 Sobic004G139201 Sobic004G139201 Sobic004G341500--Sobic004G139201 Sobic004G341500--Sobic001G004901 Sobic003G390600 Sobic003G390600 Sobic004G341500--Sobic003G390600 Sobic004G341500--Sobic010G183900 Sobic004G341500--Sobic004G045100 Sobic004G073700 Sobic004G073700 Sobic004G341500--Sobic004G073700 Sobic007G218550 Sobic007G218550 Sobic004G341500--Sobic007G218550 Sobic004G341500--Sobic002G427201
Octagon: transcription factors


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