Gene annotation
Transcriptome id Sobic.001G114800.1
Synonym
Functional annotation -
UniProt A0A1Z5S583
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214100 expressed protein -
2 Sobic.003G264400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
4 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.002G354100 transporter family protein, putative, expressed -
6 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
7 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
8 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G427800 Cupin domain containing protein, expressed -
10 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.003G282901 - -
12 Sobic.001G423800 DNA binding protein, putative, expressed -
13 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
14 Sobic.008G187001 - K09422: transcription factor MYB, plant
15 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
16 Sobic.002G139400 AP2 domain containing protein, expressed -
17 Sobic.004G259366 - -
18 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
19 Sobic.010G212800 expressed protein -
20 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase


Gene co-expression network
sample Sobic001G114800 Sobic001G114800 Sobic003G214100 Sobic003G214100 Sobic001G114800--Sobic003G214100 Sobic003G264400 Sobic003G264400 Sobic001G114800--Sobic003G264400 Sobic002G188900 Sobic002G188900 Sobic001G114800--Sobic002G188900 Sobic004G243100 Sobic004G243100 Sobic001G114800--Sobic004G243100 Sobic002G354100 Sobic002G354100 Sobic001G114800--Sobic002G354100 Sobic001G231700 Sobic001G231700 Sobic001G114800--Sobic001G231700 Sobic001G018300 Sobic001G018300 Sobic001G114800--Sobic001G018300 Sobic006G277600 Sobic006G277600 Sobic001G114800--Sobic006G277600 Sobic003G427800 Sobic003G427800 Sobic001G114800--Sobic003G427800 Sobic003G214100--Sobic001G114800 Sobic003G214100--Sobic003G264400 Sobic007G169900 Sobic007G169900 Sobic003G214100--Sobic007G169900 Sobic003G214100--Sobic001G231700 Sobic003G214100--Sobic002G188900 Sobic003G084400 Sobic003G084400 Sobic003G214100--Sobic003G084400 Sobic003G214100--Sobic006G277600 Sobic002G354200 Sobic002G354200 Sobic003G214100--Sobic002G354200 Sobic009G106400 Sobic009G106400 Sobic003G214100--Sobic009G106400 Sobic003G200700 Sobic003G200700 Sobic003G264400--Sobic003G200700 Sobic009G240600 Sobic009G240600 Sobic003G264400--Sobic009G240600 Sobic007G227300 Sobic007G227300 Sobic003G264400--Sobic007G227300 Sobic001G192200 Sobic001G192200 Sobic003G264400--Sobic001G192200 Sobic003G264400--Sobic001G231700 Sobic003G264400--Sobic004G243100 Sobic003G264400--Sobic006G277600 Sobic008G063400 Sobic008G063400 Sobic003G264400--Sobic008G063400 Sobic003G264400--Sobic001G114800 Sobic004G100700 Sobic004G100700 Sobic002G188900--Sobic004G100700 Sobic005G011300 Sobic005G011300 Sobic002G188900--Sobic005G011300 Sobic003G033900 Sobic003G033900 Sobic002G188900--Sobic003G033900 Sobic001G140900 Sobic001G140900 Sobic002G188900--Sobic001G140900 Sobic004G141200 Sobic004G141200 Sobic002G188900--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic002G188900--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic002G188900--Sobic001G108200 Sobic004G304625 Sobic004G304625 Sobic002G188900--Sobic004G304625 Sobic007G057000 Sobic007G057000 Sobic002G188900--Sobic007G057000 Sobic004G243100--Sobic001G018300 Sobic001G231400 Sobic001G231400 Sobic004G243100--Sobic001G231400 Sobic009G224100 Sobic009G224100 Sobic004G243100--Sobic009G224100 Sobic001G423800 Sobic001G423800 Sobic004G243100--Sobic001G423800 Sobic002G139400 Sobic002G139400 Sobic004G243100--Sobic002G139400 Sobic002G192000 Sobic002G192000 Sobic004G243100--Sobic002G192000 Sobic002G251000 Sobic002G251000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic002G263400 Sobic002G263400 Sobic004G243100--Sobic002G263400 Sobic002G354100--Sobic006G277600 Sobic003G117600 Sobic003G117600 Sobic002G354100--Sobic003G117600 Sobic002G354100--Sobic001G231700 Sobic003G382600 Sobic003G382600 Sobic002G354100--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic002G354100--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic002G354100--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic002G354100--Sobic006G099900 Sobic002G353900 Sobic002G353900 Sobic002G354100--Sobic002G353900 Sobic005G091500 Sobic005G091500 Sobic002G354100--Sobic005G091500 Sobic001G231700--Sobic006G277600 Sobic001G402200 Sobic001G402200 Sobic001G231700--Sobic001G402200 Sobic001G367600 Sobic001G367600 Sobic001G231700--Sobic001G367600 Sobic006G103000 Sobic006G103000 Sobic001G231700--Sobic006G103000 Sobic001G231700--Sobic009G240600 Sobic006G234800 Sobic006G234800 Sobic001G231700--Sobic006G234800 Sobic001G481400 Sobic001G481400 Sobic001G231700--Sobic001G481400 Sobic001G500000 Sobic001G500000 Sobic001G231700--Sobic001G500000 Sobic001G231700--Sobic002G188900 Sobic001G018300--Sobic004G243100 Sobic001G018300--Sobic001G231400 Sobic001G018300--Sobic002G192000 Sobic001G318700 Sobic001G318700 Sobic001G018300--Sobic001G318700 Sobic001G018300--Sobic001G423800 Sobic001G018300--Sobic002G263400 Sobic004G229800 Sobic004G229800 Sobic001G018300--Sobic004G229800 Sobic001G018300--Sobic001G367600 Sobic007G155100 Sobic007G155100 Sobic001G018300--Sobic007G155100 Sobic006G277600--Sobic002G354100 Sobic006G277600--Sobic001G231700 Sobic006G277600--Sobic003G117600 Sobic006G277600--Sobic007G227300 Sobic006G277600--Sobic006G099900 Sobic001G503100 Sobic001G503100 Sobic006G277600--Sobic001G503100 Sobic007G184600 Sobic007G184600 Sobic006G277600--Sobic007G184600 Sobic009G111000 Sobic009G111000 Sobic006G277600--Sobic009G111000 Sobic005G206601 Sobic005G206601 Sobic006G277600--Sobic005G206601 Sobic009G205500 Sobic009G205500 Sobic003G427800--Sobic009G205500 Sobic004G229500 Sobic004G229500 Sobic003G427800--Sobic004G229500 Sobic001G195200 Sobic001G195200 Sobic003G427800--Sobic001G195200 Sobic004G229400 Sobic004G229400 Sobic003G427800--Sobic004G229400 Sobic010G064000 Sobic010G064000 Sobic003G427800--Sobic010G064000 Sobic008G158732 Sobic008G158732 Sobic003G427800--Sobic008G158732 Sobic009G183900 Sobic009G183900 Sobic003G427800--Sobic009G183900 Sobic007G058400 Sobic007G058400 Sobic003G427800--Sobic007G058400 Sobic004G219800 Sobic004G219800 Sobic003G427800--Sobic004G219800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.