Gene annotation
Transcriptome id Sobic.003G427800.1
Synonym GLP5, Sb03g045990
Functional annotation Cupin domain containing protein, expressed
UniProt C5XHX3
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09560 : germin-like protein 5
RAP-DB (Rice) LOC_Os03g44880.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039119 , Zm00025a043626 , Zm00025a045177 , Zm00025a025978
Brachypodium KQK11561 , KQK11562
Barley HORVU3Hr1G107930.2 , HORVU3Hr1G107930.1 , HORVU3Hr1G107870.1 , HORVU3Hr1G107830.1 , HORVU3Hr1G107930.3 , HORVU6Hr1G089510.1 , HORVU6Hr1G089510.2 , HORVU3Hr1G107860.1 , HORVU6Hr1G089570.3 , HORVU6Hr1G089570.2 , HORVU6Hr1G089570.1
Wheat TraesCS3B02G543800 , TraesCS6D02G367000 , TraesCS3D02G489800 , TraesCSU02G057500 , TraesCS3D02G489700 , TraesCS3D02G490100 , TraesCS6A02G382900 , TraesCS6B02G422100 , TraesCS7D02G477200 , TraesCS3B02G544000 , TraesCS3D02G490200 , TraesCS3A02G040900 , TraesCS6D02G367800 , TraesCS6B02G422000 , TraesCS3B02G544200 , TraesCS6A02G382200 , TraesCS3D02G490500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
3 Sobic.001G195200 cytochrome P450, putative, expressed -
4 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
5 Sobic.010G064000 expressed protein -
6 Sobic.008G158732 - -
7 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
9 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
11 Sobic.008G187001 - K09422: transcription factor MYB, plant
12 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
13 Sobic.010G063033 - -
14 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
16 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
17 Sobic.004G097100 F-box family protein, putative, expressed -
18 Sobic.005G013500 WRKY52, expressed -
19 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
20 Sobic.004G294400 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G427800 Sobic003G427800 Sobic009G205500 Sobic009G205500 Sobic003G427800--Sobic009G205500 Sobic004G229500 Sobic004G229500 Sobic003G427800--Sobic004G229500 Sobic001G195200 Sobic001G195200 Sobic003G427800--Sobic001G195200 Sobic004G229400 Sobic004G229400 Sobic003G427800--Sobic004G229400 Sobic010G064000 Sobic010G064000 Sobic003G427800--Sobic010G064000 Sobic008G158732 Sobic008G158732 Sobic003G427800--Sobic008G158732 Sobic009G183900 Sobic009G183900 Sobic003G427800--Sobic009G183900 Sobic007G058400 Sobic007G058400 Sobic003G427800--Sobic007G058400 Sobic004G219800 Sobic004G219800 Sobic003G427800--Sobic004G219800 Sobic009G205500--Sobic003G427800 Sobic009G205500--Sobic008G158732 Sobic009G205500--Sobic009G183900 Sobic002G184300 Sobic002G184300 Sobic009G205500--Sobic002G184300 Sobic009G205500--Sobic004G229400 Sobic005G013500 Sobic005G013500 Sobic009G205500--Sobic005G013500 Sobic009G205500--Sobic004G229500 Sobic002G351300 Sobic002G351300 Sobic009G205500--Sobic002G351300 Sobic009G032000 Sobic009G032000 Sobic009G205500--Sobic009G032000 Sobic004G246600 Sobic004G246600 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G097100 Sobic004G097100 Sobic004G229500--Sobic004G097100 Sobic004G229500--Sobic003G427800 Sobic004G229500--Sobic009G032000 Sobic004G308900 Sobic004G308900 Sobic004G229500--Sobic004G308900 Sobic004G229500--Sobic009G183900 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic004G294400 Sobic004G294400 Sobic001G195200--Sobic004G294400 Sobic001G256700 Sobic001G256700 Sobic001G195200--Sobic001G256700 Sobic001G195200--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G195200--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic001G195200--Sobic007G122800 Sobic004G004500 Sobic004G004500 Sobic001G195200--Sobic004G004500 Sobic004G108200 Sobic004G108200 Sobic001G195200--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic001G195200--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic001G195200--Sobic004G191300 Sobic004G229400--Sobic009G183900 Sobic002G234400 Sobic002G234400 Sobic004G229400--Sobic002G234400 Sobic004G229400--Sobic009G205500 Sobic004G229400--Sobic007G058400 Sobic004G229400--Sobic003G427800 Sobic004G229400--Sobic004G229500 Sobic004G229400--Sobic010G064000 Sobic004G229400--Sobic008G158732 Sobic004G229400--Sobic005G013500 Sobic010G064000--Sobic003G427800 Sobic010G064000--Sobic004G229400 Sobic004G171700 Sobic004G171700 Sobic010G064000--Sobic004G171700 Sobic001G471200 Sobic001G471200 Sobic010G064000--Sobic001G471200 Sobic003G228900 Sobic003G228900 Sobic010G064000--Sobic003G228900 Sobic010G064000--Sobic002G234400 Sobic007G017500 Sobic007G017500 Sobic010G064000--Sobic007G017500 Sobic010G064000--Sobic004G097100 Sobic010G064000--Sobic007G058400 Sobic008G158732--Sobic009G205500 Sobic008G158732--Sobic003G427800 Sobic004G156000 Sobic004G156000 Sobic008G158732--Sobic004G156000 Sobic008G158732--Sobic004G229400 Sobic008G158666 Sobic008G158666 Sobic008G158732--Sobic008G158666 Sobic008G158732--Sobic001G195200 Sobic008G158732--Sobic007G017500 Sobic008G158732--Sobic010G064000 Sobic004G292900 Sobic004G292900 Sobic008G158732--Sobic004G292900 Sobic009G183900--Sobic002G234400 Sobic009G183900--Sobic005G013500 Sobic009G183900--Sobic004G229400 Sobic009G144700 Sobic009G144700 Sobic009G183900--Sobic009G144700 Sobic009G183900--Sobic004G108200 Sobic009G183900--Sobic009G205500 Sobic009G183900--Sobic004G097100 Sobic009G183900--Sobic004G229500 Sobic002G388900 Sobic002G388900 Sobic009G183900--Sobic002G388900 Sobic007G058400--Sobic004G229400 Sobic007G058400--Sobic003G427800 Sobic007G058400--Sobic007G017500 Sobic001G031700 Sobic001G031700 Sobic007G058400--Sobic001G031700 Sobic007G058400--Sobic004G229500 Sobic007G058400--Sobic005G013500 Sobic006G075400 Sobic006G075400 Sobic007G058400--Sobic006G075400 Sobic007G058400--Sobic009G205500 Sobic007G058400--Sobic002G351300 Sobic004G219800--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic004G219800--Sobic001G330100 Sobic004G352000 Sobic004G352000 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic004G219800--Sobic007G017500 Sobic004G219800--Sobic006G075400
Octagon: transcription factors


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