Gene annotation
Transcriptome id Sobic.008G158732.1
Synonym -
Functional annotation -
UniProt A0A1Z5R724
Pfam PF00234
Panther DB PTHR31731
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62510 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g01320.1 : LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a000125
Brachypodium -
Barley HORVU4Hr1G087780.8 , HORVU4Hr1G087780.4 , HORVU4Hr1G087780.5 , HORVU4Hr1G087780.6 , HORVU4Hr1G087780.1 , HORVU4Hr1G087780.7 , HORVU4Hr1G087780.3 , HORVU4Hr1G087770.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.003G427800 Cupin domain containing protein, expressed -
3 Sobic.004G156000 dehydrogenase/reductase, putative, expressed -
4 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
5 Sobic.008G158666 - -
6 Sobic.001G195200 cytochrome P450, putative, expressed -
7 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
8 Sobic.010G064000 expressed protein -
9 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
11 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
12 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
13 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.002G351300 expressed protein -
15 Sobic.006G235100 expressed protein -
16 Sobic.007G122800 expressed protein -
17 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
18 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
19 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
20 Sobic.004G308900 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic008G158732 Sobic008G158732 Sobic009G205500 Sobic009G205500 Sobic008G158732--Sobic009G205500 Sobic003G427800 Sobic003G427800 Sobic008G158732--Sobic003G427800 Sobic004G156000 Sobic004G156000 Sobic008G158732--Sobic004G156000 Sobic004G229400 Sobic004G229400 Sobic008G158732--Sobic004G229400 Sobic008G158666 Sobic008G158666 Sobic008G158732--Sobic008G158666 Sobic001G195200 Sobic001G195200 Sobic008G158732--Sobic001G195200 Sobic007G017500 Sobic007G017500 Sobic008G158732--Sobic007G017500 Sobic010G064000 Sobic010G064000 Sobic008G158732--Sobic010G064000 Sobic004G292900 Sobic004G292900 Sobic008G158732--Sobic004G292900 Sobic009G205500--Sobic003G427800 Sobic009G205500--Sobic008G158732 Sobic009G183900 Sobic009G183900 Sobic009G205500--Sobic009G183900 Sobic002G184300 Sobic002G184300 Sobic009G205500--Sobic002G184300 Sobic009G205500--Sobic004G229400 Sobic005G013500 Sobic005G013500 Sobic009G205500--Sobic005G013500 Sobic004G229500 Sobic004G229500 Sobic009G205500--Sobic004G229500 Sobic002G351300 Sobic002G351300 Sobic009G205500--Sobic002G351300 Sobic009G032000 Sobic009G032000 Sobic009G205500--Sobic009G032000 Sobic003G427800--Sobic009G205500 Sobic003G427800--Sobic004G229500 Sobic003G427800--Sobic001G195200 Sobic003G427800--Sobic004G229400 Sobic003G427800--Sobic010G064000 Sobic003G427800--Sobic008G158732 Sobic003G427800--Sobic009G183900 Sobic007G058400 Sobic007G058400 Sobic003G427800--Sobic007G058400 Sobic004G219800 Sobic004G219800 Sobic003G427800--Sobic004G219800 Sobic008G187001 Sobic008G187001 Sobic004G156000--Sobic008G187001 Sobic002G388900 Sobic002G388900 Sobic004G156000--Sobic002G388900 Sobic004G156000--Sobic008G158732 Sobic007G036900 Sobic007G036900 Sobic004G156000--Sobic007G036900 Sobic001G256700 Sobic001G256700 Sobic004G156000--Sobic001G256700 Sobic004G156000--Sobic009G183900 Sobic004G156000--Sobic001G195200 Sobic004G108200 Sobic004G108200 Sobic004G156000--Sobic004G108200 Sobic004G156000--Sobic007G017500 Sobic004G229400--Sobic009G183900 Sobic002G234400 Sobic002G234400 Sobic004G229400--Sobic002G234400 Sobic004G229400--Sobic009G205500 Sobic004G229400--Sobic007G058400 Sobic004G229400--Sobic003G427800 Sobic004G229400--Sobic004G229500 Sobic004G229400--Sobic010G064000 Sobic004G229400--Sobic008G158732 Sobic004G229400--Sobic005G013500 Sobic003G442100 Sobic003G442100 Sobic008G158666--Sobic003G442100 Sobic008G158666--Sobic008G158732 Sobic005G086600 Sobic005G086600 Sobic008G158666--Sobic005G086600 Sobic007G039600 Sobic007G039600 Sobic008G158666--Sobic007G039600 Sobic003G073460 Sobic003G073460 Sobic008G158666--Sobic003G073460 Sobic002G338450 Sobic002G338450 Sobic008G158666--Sobic002G338450 Sobic006G235100 Sobic006G235100 Sobic008G158666--Sobic006G235100 Sobic006G132900 Sobic006G132900 Sobic008G158666--Sobic006G132900 Sobic003G265000 Sobic003G265000 Sobic008G158666--Sobic003G265000 Sobic004G294400 Sobic004G294400 Sobic001G195200--Sobic004G294400 Sobic001G195200--Sobic001G256700 Sobic004G308900 Sobic004G308900 Sobic001G195200--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G195200--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic001G195200--Sobic007G122800 Sobic004G004500 Sobic004G004500 Sobic001G195200--Sobic004G004500 Sobic001G195200--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic001G195200--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic001G195200--Sobic004G191300 Sobic006G075400 Sobic006G075400 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic007G017500--Sobic003G228900 Sobic003G268600 Sobic003G268600 Sobic007G017500--Sobic003G268600 Sobic004G141100 Sobic004G141100 Sobic007G017500--Sobic004G141100 Sobic001G330400 Sobic001G330400 Sobic007G017500--Sobic001G330400 Sobic007G017500--Sobic004G219800 Sobic004G041900 Sobic004G041900 Sobic007G017500--Sobic004G041900 Sobic003G043600 Sobic003G043600 Sobic007G017500--Sobic003G043600 Sobic010G064000--Sobic003G427800 Sobic010G064000--Sobic004G229400 Sobic004G171700 Sobic004G171700 Sobic010G064000--Sobic004G171700 Sobic001G471200 Sobic001G471200 Sobic010G064000--Sobic001G471200 Sobic010G064000--Sobic003G228900 Sobic010G064000--Sobic002G234400 Sobic010G064000--Sobic007G017500 Sobic004G097100 Sobic004G097100 Sobic010G064000--Sobic004G097100 Sobic010G064000--Sobic007G058400 Sobic006G172550 Sobic006G172550 Sobic004G292900--Sobic006G172550 Sobic001G302600 Sobic001G302600 Sobic004G292900--Sobic001G302600 Sobic001G304100 Sobic001G304100 Sobic004G292900--Sobic001G304100 Sobic001G238400 Sobic001G238400 Sobic004G292900--Sobic001G238400 Sobic006G234800 Sobic006G234800 Sobic004G292900--Sobic006G234800 Sobic006G198700 Sobic006G198700 Sobic004G292900--Sobic006G198700 Sobic001G416200 Sobic001G416200 Sobic004G292900--Sobic001G416200 Sobic009G188000 Sobic009G188000 Sobic004G292900--Sobic009G188000 Sobic002G354200 Sobic002G354200 Sobic004G292900--Sobic002G354200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.