Gene annotation
Transcriptome id Sobic.004G156000.1
Synonym HSD1, Sb04g020710, ATHSD1
Functional annotation dehydrogenase/reductase, putative, expressed
UniProt A0A109NDR3 , C5XSM5
Pfam PF08659
Panther DB PTHR24322:SF381 PTHR24322
NCBI CDD KOG1205; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50600 : hydroxysteroid dehydrogenase 1
RAP-DB (Rice) LOC_Os02g30714.1 : dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ99593
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G187001 - K09422: transcription factor MYB, plant
2 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
3 Sobic.008G158732 - -
4 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
5 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
6 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
7 Sobic.001G195200 cytochrome P450, putative, expressed -
8 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
9 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
10 Sobic.004G294400 expansin precursor, putative, expressed -
11 Sobic.004G308900 AP2 domain containing protein, expressed -
12 Sobic.009G122400 expressed protein -
13 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.003G427800 Cupin domain containing protein, expressed -
16 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
17 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
18 Sobic.004G191400 - -
19 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
20 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic004G156000 Sobic004G156000 Sobic008G187001 Sobic008G187001 Sobic004G156000--Sobic008G187001 Sobic002G388900 Sobic002G388900 Sobic004G156000--Sobic002G388900 Sobic008G158732 Sobic008G158732 Sobic004G156000--Sobic008G158732 Sobic007G036900 Sobic007G036900 Sobic004G156000--Sobic007G036900 Sobic001G256700 Sobic001G256700 Sobic004G156000--Sobic001G256700 Sobic009G183900 Sobic009G183900 Sobic004G156000--Sobic009G183900 Sobic001G195200 Sobic001G195200 Sobic004G156000--Sobic001G195200 Sobic004G108200 Sobic004G108200 Sobic004G156000--Sobic004G108200 Sobic007G017500 Sobic007G017500 Sobic004G156000--Sobic007G017500 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic004G219800 Sobic004G219800 Sobic008G187001--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic008G187001--Sobic009G032000 Sobic001G330100 Sobic001G330100 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic004G352000 Sobic004G352000 Sobic008G187001--Sobic004G352000 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic009G205500 Sobic009G205500 Sobic008G158732--Sobic009G205500 Sobic003G427800 Sobic003G427800 Sobic008G158732--Sobic003G427800 Sobic008G158732--Sobic004G156000 Sobic004G229400 Sobic004G229400 Sobic008G158732--Sobic004G229400 Sobic008G158666 Sobic008G158666 Sobic008G158732--Sobic008G158666 Sobic008G158732--Sobic001G195200 Sobic008G158732--Sobic007G017500 Sobic010G064000 Sobic010G064000 Sobic008G158732--Sobic010G064000 Sobic004G292900 Sobic004G292900 Sobic008G158732--Sobic004G292900 Sobic004G004500 Sobic004G004500 Sobic007G036900--Sobic004G004500 Sobic007G036900--Sobic008G187001 Sobic004G229800 Sobic004G229800 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic004G141200 Sobic004G141200 Sobic007G036900--Sobic004G141200 Sobic002G339000 Sobic002G339000 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic001G108200 Sobic001G108200 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic001G256700--Sobic008G187001 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic004G294400 Sobic004G294400 Sobic001G256700--Sobic004G294400 Sobic001G256700--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G256700--Sobic002G395300 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G256700--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic009G183900--Sobic002G234400 Sobic005G013500 Sobic005G013500 Sobic009G183900--Sobic005G013500 Sobic009G183900--Sobic004G229400 Sobic009G183900--Sobic009G144700 Sobic009G183900--Sobic004G108200 Sobic009G183900--Sobic009G205500 Sobic004G097100 Sobic004G097100 Sobic009G183900--Sobic004G097100 Sobic004G229500 Sobic004G229500 Sobic009G183900--Sobic004G229500 Sobic009G183900--Sobic002G388900 Sobic001G195200--Sobic004G294400 Sobic001G195200--Sobic001G256700 Sobic001G195200--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G195200--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic001G195200--Sobic007G122800 Sobic001G195200--Sobic004G004500 Sobic001G195200--Sobic004G108200 Sobic001G195200--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic001G195200--Sobic004G191300 Sobic003G148300 Sobic003G148300 Sobic004G108200--Sobic003G148300 Sobic004G108200--Sobic009G144700 Sobic004G108200--Sobic004G294400 Sobic004G108200--Sobic001G256700 Sobic004G108200--Sobic001G330100 Sobic004G108200--Sobic004G004500 Sobic004G108200--Sobic002G395300 Sobic004G108200--Sobic001G195200 Sobic004G108200--Sobic002G234400 Sobic006G075400 Sobic006G075400 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic007G017500--Sobic003G228900 Sobic003G268600 Sobic003G268600 Sobic007G017500--Sobic003G268600 Sobic004G141100 Sobic004G141100 Sobic007G017500--Sobic004G141100 Sobic001G330400 Sobic001G330400 Sobic007G017500--Sobic001G330400 Sobic007G017500--Sobic004G219800 Sobic004G041900 Sobic004G041900 Sobic007G017500--Sobic004G041900 Sobic003G043600 Sobic003G043600 Sobic007G017500--Sobic003G043600
Octagon: transcription factors


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