Gene annotation
Transcriptome id Sobic.001G162900.1
Synonym Sb01g014250, ATARI2, ARI2
Functional annotation zinc finger protein-related, putative, expressed
UniProt C5WS67
Pfam PF01485
Panther DB PTHR11685 PTHR11685:SF157
NCBI CDD KOG1815; Predicted E3 ubiquitin ligase
KEGG Orthology K11968; ariadne-1
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT4G34370 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os03g42760.1 : zinc finger protein-related, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G011910.1 , HORVU4Hr1G011910.8 , HORVU4Hr1G011910.9 , HORVU4Hr1G011910.6 , HORVU4Hr1G011910.7 , HORVU4Hr1G011910.4 , HORVU4Hr1G011910.5 , HORVU4Hr1G011910.2 , HORVU4Hr1G011910.3
Wheat TraesCS4D02G070400 , TraesCS4D02G070400 , TraesCS4B02G071800 , TraesCS4B02G071800 , TraesCS4B02G071700 , TraesCS4D02G070600 , TraesCS4A02G243200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G189800 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.003G070300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
3 Sobic.003G243400 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
4 Sobic.002G223100 annexin, putative, expressed -
5 Sobic.002G008000 DnaK family protein, putative, expressed -
6 Sobic.009G053001 - -
7 Sobic.010G212600 WAX2, putative, expressed -
8 Sobic.009G239000 OsMADS78 - MADS-box family gene with M-alpha type-box, expressed -
9 Sobic.004G303150 - -
10 Sobic.004G240250 - -
11 Sobic.008G116900 OsFBL38 - F-box domain and LRR containing protein, expressed -
12 Sobic.009G017300 - -
13 Sobic.009G067200 expressed protein -
14 Sobic.010G201100 expressed protein -
15 Sobic.007G069450 - -
16 Sobic.002G069232 - -
17 Sobic.002G401301 - -
18 Sobic.004G290400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.002G044900 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.001G359601 - -


Gene co-expression network
sample Sobic001G162900 Sobic001G162900 Sobic002G189800 Sobic002G189800 Sobic001G162900--Sobic002G189800 Sobic003G070300 Sobic003G070300 Sobic001G162900--Sobic003G070300 Sobic003G243400 Sobic003G243400 Sobic001G162900--Sobic003G243400 Sobic002G223100 Sobic002G223100 Sobic001G162900--Sobic002G223100 Sobic002G008000 Sobic002G008000 Sobic001G162900--Sobic002G008000 Sobic009G053001 Sobic009G053001 Sobic001G162900--Sobic009G053001 Sobic010G212600 Sobic010G212600 Sobic001G162900--Sobic010G212600 Sobic009G239000 Sobic009G239000 Sobic001G162900--Sobic009G239000 Sobic004G303150 Sobic004G303150 Sobic001G162900--Sobic004G303150 Sobic002G189800--Sobic003G070300 Sobic002G189800--Sobic003G243400 Sobic002G189800--Sobic001G162900 Sobic002G189800--Sobic010G212600 Sobic009G067200 Sobic009G067200 Sobic002G189800--Sobic009G067200 Sobic002G189800--Sobic002G008000 Sobic002G189800--Sobic002G223100 Sobic002G189800--Sobic009G053001 Sobic002G189800--Sobic004G303150 Sobic003G070300--Sobic002G189800 Sobic003G070300--Sobic001G162900 Sobic003G070300--Sobic003G243400 Sobic006G229200 Sobic006G229200 Sobic003G070300--Sobic006G229200 Sobic003G193300 Sobic003G193300 Sobic003G070300--Sobic003G193300 Sobic003G070300--Sobic010G212600 Sobic003G070300--Sobic009G067200 Sobic008G005400 Sobic008G005400 Sobic003G070300--Sobic008G005400 Sobic006G188100 Sobic006G188100 Sobic003G070300--Sobic006G188100 Sobic003G243400--Sobic010G212600 Sobic002G044900 Sobic002G044900 Sobic003G243400--Sobic002G044900 Sobic003G243400--Sobic009G067200 Sobic002G267050 Sobic002G267050 Sobic003G243400--Sobic002G267050 Sobic002G401301 Sobic002G401301 Sobic003G243400--Sobic002G401301 Sobic003G243400--Sobic002G223100 Sobic001G152500 Sobic001G152500 Sobic003G243400--Sobic001G152500 Sobic003G243400--Sobic002G008000 Sobic005G135500 Sobic005G135500 Sobic003G243400--Sobic005G135500 Sobic004G274000 Sobic004G274000 Sobic002G223100--Sobic004G274000 Sobic002G223100--Sobic002G401301 Sobic010G111700 Sobic010G111700 Sobic002G223100--Sobic010G111700 Sobic007G035100 Sobic007G035100 Sobic002G223100--Sobic007G035100 Sobic002G223100--Sobic002G008000 Sobic004G286351 Sobic004G286351 Sobic002G223100--Sobic004G286351 Sobic007G069450 Sobic007G069450 Sobic002G223100--Sobic007G069450 Sobic002G223100--Sobic009G053001 Sobic001G493600 Sobic001G493600 Sobic002G223100--Sobic001G493600 Sobic002G008000--Sobic004G274000 Sobic002G008000--Sobic002G401301 Sobic002G008000--Sobic002G223100 Sobic002G159400 Sobic002G159400 Sobic002G008000--Sobic002G159400 Sobic002G008000--Sobic007G035100 Sobic002G008000--Sobic010G111700 Sobic006G042800 Sobic006G042800 Sobic002G008000--Sobic006G042800 Sobic009G021100 Sobic009G021100 Sobic002G008000--Sobic009G021100 Sobic002G008000--Sobic004G286351 Sobic009G053001--Sobic004G303150 Sobic010G172666 Sobic010G172666 Sobic009G053001--Sobic010G172666 Sobic009G053001--Sobic001G493600 Sobic009G053001--Sobic004G286351 Sobic009G053001--Sobic009G239000 Sobic008G116900 Sobic008G116900 Sobic009G053001--Sobic008G116900 Sobic009G053001--Sobic007G069450 Sobic009G053001--Sobic010G111700 Sobic009G053001--Sobic007G035100 Sobic010G212600--Sobic003G243400 Sobic010G212600--Sobic002G267050 Sobic010G212600--Sobic009G067200 Sobic010G212600--Sobic001G152500 Sobic010G212600--Sobic002G044900 Sobic010G212600--Sobic005G135500 Sobic010G272400 Sobic010G272400 Sobic010G212600--Sobic010G272400 Sobic008G053000 Sobic008G053000 Sobic010G212600--Sobic008G053000 Sobic010G212600--Sobic002G401301 Sobic009G239000--Sobic010G172666 Sobic009G239000--Sobic001G493600 Sobic009G239000--Sobic004G303150 Sobic009G239000--Sobic008G116900 Sobic002G069232 Sobic002G069232 Sobic009G239000--Sobic002G069232 Sobic009G239000--Sobic004G286351 Sobic009G239000--Sobic009G053001 Sobic004G133800 Sobic004G133800 Sobic009G239000--Sobic004G133800 Sobic009G239000--Sobic007G069450 Sobic004G303150--Sobic010G172666 Sobic004G303150--Sobic001G493600 Sobic004G303150--Sobic009G239000 Sobic004G303150--Sobic004G286351 Sobic004G303150--Sobic009G053001 Sobic004G303150--Sobic008G116900 Sobic001G263801 Sobic001G263801 Sobic004G303150--Sobic001G263801 Sobic002G005500 Sobic002G005500 Sobic004G303150--Sobic002G005500 Sobic004G303150--Sobic002G069232
Octagon: transcription factors


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