Gene annotation
Transcriptome id Sobic.009G067200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P705
Pfam -
Panther DB PTHR10052 PTHR10052:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57060 : -
RAP-DB (Rice) LOC_Os05g08854.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT71684 , PNT71679 , KQK07190 , PNT71680 , PNT71681 , PNT71682 , PNT71678 , PNT71683 , PNT71675 , PNT71674 , PNT71677 , PNT71676 , PNT71685
Barley HORVU1Hr1G027400.1 , HORVU1Hr1G027400.2 , HORVU1Hr1G027400.4 , HORVU1Hr1G027400.5 , HORVU1Hr1G027400.6 , HORVU1Hr1G027400.7 , HORVU1Hr1G027400.8 , HORVU1Hr1G027400.9 , HORVU1Hr1G027400.12 , HORVU1Hr1G027400.13
Wheat TraesCS1D02G121400 , TraesCS1D02G121400 , TraesCS1A02G120400 , TraesCS1B02G139800 , TraesCS1B02G139800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G067200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G212600 WAX2, putative, expressed -
2 Sobic.003G243400 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
3 Sobic.004G290400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.002G267050 - -
5 Sobic.001G022000 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
6 Sobic.002G044900 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.001G152500 OsFBX387 - F-box domain containing protein, expressed -
8 Sobic.010G272400 expressed protein -
9 Sobic.002G384800 pentatricopeptide, putative, expressed -
10 Sobic.005G135500 chalcone and stilbene synthases, putative, expressed -
11 Sobic.003G326100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
12 Sobic.008G053000 receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.002G401301 - -
14 Sobic.005G050900 - -
15 Sobic.005G205000 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
16 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
17 Sobic.005G201800 OsFBX230 - F-box domain containing protein, expressed -
18 Sobic.005G207600 - -
19 Sobic.002G237600 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
20 Sobic.002G067050 - -


Gene co-expression network
sample Sobic009G067200 Sobic009G067200 Sobic010G212600 Sobic010G212600 Sobic009G067200--Sobic010G212600 Sobic003G243400 Sobic003G243400 Sobic009G067200--Sobic003G243400 Sobic004G290400 Sobic004G290400 Sobic009G067200--Sobic004G290400 Sobic002G267050 Sobic002G267050 Sobic009G067200--Sobic002G267050 Sobic001G022000 Sobic001G022000 Sobic009G067200--Sobic001G022000 Sobic002G044900 Sobic002G044900 Sobic009G067200--Sobic002G044900 Sobic001G152500 Sobic001G152500 Sobic009G067200--Sobic001G152500 Sobic010G272400 Sobic010G272400 Sobic009G067200--Sobic010G272400 Sobic002G384800 Sobic002G384800 Sobic009G067200--Sobic002G384800 Sobic010G212600--Sobic003G243400 Sobic010G212600--Sobic002G267050 Sobic010G212600--Sobic009G067200 Sobic010G212600--Sobic001G152500 Sobic010G212600--Sobic002G044900 Sobic005G135500 Sobic005G135500 Sobic010G212600--Sobic005G135500 Sobic010G212600--Sobic010G272400 Sobic008G053000 Sobic008G053000 Sobic010G212600--Sobic008G053000 Sobic002G401301 Sobic002G401301 Sobic010G212600--Sobic002G401301 Sobic003G243400--Sobic010G212600 Sobic003G243400--Sobic002G044900 Sobic003G243400--Sobic009G067200 Sobic003G243400--Sobic002G267050 Sobic003G243400--Sobic002G401301 Sobic002G223100 Sobic002G223100 Sobic003G243400--Sobic002G223100 Sobic003G243400--Sobic001G152500 Sobic002G008000 Sobic002G008000 Sobic003G243400--Sobic002G008000 Sobic003G243400--Sobic005G135500 Sobic004G290400--Sobic002G044900 Sobic004G290400--Sobic009G067200 Sobic006G088500 Sobic006G088500 Sobic004G290400--Sobic006G088500 Sobic004G290400--Sobic002G401301 Sobic002G312100 Sobic002G312100 Sobic004G290400--Sobic002G312100 Sobic003G326100 Sobic003G326100 Sobic004G290400--Sobic003G326100 Sobic004G290400--Sobic008G053000 Sobic007G007650 Sobic007G007650 Sobic004G290400--Sobic007G007650 Sobic004G274000 Sobic004G274000 Sobic004G290400--Sobic004G274000 Sobic005G201800 Sobic005G201800 Sobic002G267050--Sobic005G201800 Sobic005G029866 Sobic005G029866 Sobic002G267050--Sobic005G029866 Sobic008G069901 Sobic008G069901 Sobic002G267050--Sobic008G069901 Sobic002G267050--Sobic001G152500 Sobic003G046000 Sobic003G046000 Sobic002G267050--Sobic003G046000 Sobic002G260500 Sobic002G260500 Sobic002G267050--Sobic002G260500 Sobic006G076700 Sobic006G076700 Sobic002G267050--Sobic006G076700 Sobic006G258200 Sobic006G258200 Sobic002G267050--Sobic006G258200 Sobic004G184900 Sobic004G184900 Sobic002G267050--Sobic004G184900 Sobic003G391700 Sobic003G391700 Sobic001G022000--Sobic003G391700 Sobic008G024000 Sobic008G024000 Sobic001G022000--Sobic008G024000 Sobic007G090418 Sobic007G090418 Sobic001G022000--Sobic007G090418 Sobic002G237600 Sobic002G237600 Sobic001G022000--Sobic002G237600 Sobic006G163066 Sobic006G163066 Sobic001G022000--Sobic006G163066 Sobic001G022000--Sobic003G326100 Sobic008G078966 Sobic008G078966 Sobic001G022000--Sobic008G078966 Sobic002G067050 Sobic002G067050 Sobic001G022000--Sobic002G067050 Sobic002G078600 Sobic002G078600 Sobic001G022000--Sobic002G078600 Sobic002G044900--Sobic002G401301 Sobic001G060001 Sobic001G060001 Sobic002G044900--Sobic001G060001 Sobic004G052700 Sobic004G052700 Sobic002G044900--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic002G044900--Sobic008G096401 Sobic007G120600 Sobic007G120600 Sobic002G044900--Sobic007G120600 Sobic004G181100 Sobic004G181100 Sobic002G044900--Sobic004G181100 Sobic002G044900--Sobic003G326100 Sobic005G207600 Sobic005G207600 Sobic002G044900--Sobic005G207600 Sobic002G044900--Sobic004G274000 Sobic008G045232 Sobic008G045232 Sobic001G152500--Sobic008G045232 Sobic001G152500--Sobic002G267050 Sobic002G289701 Sobic002G289701 Sobic001G152500--Sobic002G289701 Sobic005G030200 Sobic005G030200 Sobic001G152500--Sobic005G030200 Sobic002G191300 Sobic002G191300 Sobic001G152500--Sobic002G191300 Sobic001G189800 Sobic001G189800 Sobic001G152500--Sobic001G189800 Sobic001G152500--Sobic008G053000 Sobic001G152500--Sobic005G201800 Sobic001G152500--Sobic010G212600 Sobic010G272400--Sobic010G212600 Sobic010G272400--Sobic002G267050 Sobic010G272400--Sobic003G243400 Sobic010G272400--Sobic009G067200 Sobic010G272400--Sobic001G152500 Sobic010G272400--Sobic005G135500 Sobic010G272400--Sobic005G201800 Sobic010G272400--Sobic002G044900 Sobic010G272400--Sobic005G029866 Sobic001G482500 Sobic001G482500 Sobic002G384800--Sobic001G482500 Sobic002G384800--Sobic005G201800 Sobic001G200400 Sobic001G200400 Sobic002G384800--Sobic001G200400 Sobic001G406600 Sobic001G406600 Sobic002G384800--Sobic001G406600 Sobic005G120433 Sobic005G120433 Sobic002G384800--Sobic005G120433 Sobic002G384800--Sobic005G029866 Sobic002G384800--Sobic002G289701 Sobic008G045100 Sobic008G045100 Sobic002G384800--Sobic008G045100 Sobic003G190701 Sobic003G190701 Sobic002G384800--Sobic003G190701
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.