Gene annotation
Transcriptome id Sobic.001G174300.1
Synonym
Functional annotation GRAS family transcription factor containing protein, expressed
UniProt A0A1Z5S6H0
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF60
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37650 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os03g40080.1 : GRAS family transcription factor containing protein, expressed
MaizeGDB (Corn) Zm00025a007196
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G124800 MLA1, putative, expressed -
2 Sobic.001G027400 - -
3 Sobic.010G217001 - -
4 Sobic.001G316500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.002G138200 domain of unknown function DUF966 domain containing protein, expressed -
6 Sobic.005G066800 - -
7 Sobic.007G157200 - -
8 Sobic.010G059900 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
9 Sobic.003G304900 - -
10 Sobic.010G097800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G018133 - -
12 Sobic.001G214400 - -
13 Sobic.001G040701 - -
14 Sobic.002G202200 - -
15 Sobic.009G242032 - -
16 Sobic.002G367850 - -
17 Sobic.001G069200 expressed protein -
18 Sobic.008G108000 expressed protein -
19 Sobic.009G151500 cinnamoyl-CoA reductase-related, putative, expressed -
20 Sobic.004G306700 peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed K05864: PPID, peptidyl-prolyl isomerase D


Gene co-expression network
sample Sobic001G174300 Sobic001G174300 Sobic007G124800 Sobic007G124800 Sobic001G174300--Sobic007G124800 Sobic001G027400 Sobic001G027400 Sobic001G174300--Sobic001G027400 Sobic010G217001 Sobic010G217001 Sobic001G174300--Sobic010G217001 Sobic001G316500 Sobic001G316500 Sobic001G174300--Sobic001G316500 Sobic002G138200 Sobic002G138200 Sobic001G174300--Sobic002G138200 Sobic005G066800 Sobic005G066800 Sobic001G174300--Sobic005G066800 Sobic007G157200 Sobic007G157200 Sobic001G174300--Sobic007G157200 Sobic010G059900 Sobic010G059900 Sobic001G174300--Sobic010G059900 Sobic003G304900 Sobic003G304900 Sobic001G174300--Sobic003G304900 Sobic007G124800--Sobic001G174300 Sobic007G124800--Sobic001G316500 Sobic008G108000 Sobic008G108000 Sobic007G124800--Sobic008G108000 Sobic007G124800--Sobic010G217001 Sobic004G045700 Sobic004G045700 Sobic007G124800--Sobic004G045700 Sobic008G086300 Sobic008G086300 Sobic007G124800--Sobic008G086300 Sobic007G124800--Sobic001G027400 Sobic008G007200 Sobic008G007200 Sobic007G124800--Sobic008G007200 Sobic002G202200 Sobic002G202200 Sobic007G124800--Sobic002G202200 Sobic010G097800 Sobic010G097800 Sobic001G027400--Sobic010G097800 Sobic001G027400--Sobic003G304900 Sobic008G007100 Sobic008G007100 Sobic001G027400--Sobic008G007100 Sobic001G027400--Sobic001G174300 Sobic009G242032 Sobic009G242032 Sobic001G027400--Sobic009G242032 Sobic001G027400--Sobic007G157200 Sobic005G230700 Sobic005G230700 Sobic001G027400--Sobic005G230700 Sobic001G027400--Sobic007G124800 Sobic003G005332 Sobic003G005332 Sobic001G027400--Sobic003G005332 Sobic002G018133 Sobic002G018133 Sobic010G217001--Sobic002G018133 Sobic007G081400 Sobic007G081400 Sobic010G217001--Sobic007G081400 Sobic002G231400 Sobic002G231400 Sobic010G217001--Sobic002G231400 Sobic002G030001 Sobic002G030001 Sobic010G217001--Sobic002G030001 Sobic005G083866 Sobic005G083866 Sobic010G217001--Sobic005G083866 Sobic004G288900 Sobic004G288900 Sobic010G217001--Sobic004G288900 Sobic003G043650 Sobic003G043650 Sobic010G217001--Sobic003G043650 Sobic010G217001--Sobic002G138200 Sobic010G217001--Sobic001G316500 Sobic001G316500--Sobic007G124800 Sobic001G316500--Sobic003G304900 Sobic001G316500--Sobic010G217001 Sobic004G306700 Sobic004G306700 Sobic001G316500--Sobic004G306700 Sobic001G316500--Sobic001G174300 Sobic001G316500--Sobic008G007200 Sobic001G316500--Sobic010G059900 Sobic001G316500--Sobic002G202200 Sobic001G316500--Sobic001G027400 Sobic002G138200--Sobic004G288900 Sobic002G138200--Sobic003G043650 Sobic004G047001 Sobic004G047001 Sobic002G138200--Sobic004G047001 Sobic003G093500 Sobic003G093500 Sobic002G138200--Sobic003G093500 Sobic009G184500 Sobic009G184500 Sobic002G138200--Sobic009G184500 Sobic001G214400 Sobic001G214400 Sobic002G138200--Sobic001G214400 Sobic010G041500 Sobic010G041500 Sobic002G138200--Sobic010G041500 Sobic005G094500 Sobic005G094500 Sobic002G138200--Sobic005G094500 Sobic007G017300 Sobic007G017300 Sobic002G138200--Sobic007G017300 Sobic002G367850 Sobic002G367850 Sobic005G066800--Sobic002G367850 Sobic001G391000 Sobic001G391000 Sobic005G066800--Sobic001G391000 Sobic004G355401 Sobic004G355401 Sobic005G066800--Sobic004G355401 Sobic003G265300 Sobic003G265300 Sobic005G066800--Sobic003G265300 Sobic005G066800--Sobic002G202200 Sobic007G206550 Sobic007G206550 Sobic005G066800--Sobic007G206550 Sobic004G295400 Sobic004G295400 Sobic005G066800--Sobic004G295400 Sobic001G457100 Sobic001G457100 Sobic005G066800--Sobic001G457100 Sobic004G206900 Sobic004G206900 Sobic005G066800--Sobic004G206900 Sobic007G157200--Sobic010G097800 Sobic001G212701 Sobic001G212701 Sobic007G157200--Sobic001G212701 Sobic003G279600 Sobic003G279600 Sobic007G157200--Sobic003G279600 Sobic004G184500 Sobic004G184500 Sobic007G157200--Sobic004G184500 Sobic002G114600 Sobic002G114600 Sobic007G157200--Sobic002G114600 Sobic010G132300 Sobic010G132300 Sobic007G157200--Sobic010G132300 Sobic001G176800 Sobic001G176800 Sobic007G157200--Sobic001G176800 Sobic007G157200--Sobic009G184500 Sobic007G157200--Sobic002G018133 Sobic010G059900--Sobic002G018133 Sobic010G059900--Sobic001G214400 Sobic010G059900--Sobic010G217001 Sobic004G200000 Sobic004G200000 Sobic010G059900--Sobic004G200000 Sobic009G151500 Sobic009G151500 Sobic010G059900--Sobic009G151500 Sobic010G059900--Sobic001G316500 Sobic010G059900--Sobic002G138200 Sobic010G059900--Sobic003G043650 Sobic010G059900--Sobic002G231400 Sobic003G304900--Sobic001G027400 Sobic003G304900--Sobic008G007200 Sobic003G304900--Sobic001G316500 Sobic003G304900--Sobic008G007100 Sobic009G252600 Sobic009G252600 Sobic003G304900--Sobic009G252600 Sobic003G304900--Sobic010G097800 Sobic003G304900--Sobic002G138200 Sobic003G371900 Sobic003G371900 Sobic003G304900--Sobic003G371900 Sobic001G060200 Sobic001G060200 Sobic003G304900--Sobic001G060200
Octagon: transcription factors


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