Gene annotation
Transcriptome id Sobic.001G197500.1
Synonym
Functional annotation -
UniProt A0A1B6QJV0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.001G197500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G199000 expressed protein -
2 Sobic.001G139600 - -
3 Sobic.010G096801 - -
4 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
5 Sobic.009G004000 - -
6 Sobic.002G140100 expressed protein -
7 Sobic.001G261553 - -
8 Sobic.010G206700 expressed protein -
9 Sobic.005G232200 expressed protein -
10 Sobic.010G158100 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
12 Sobic.002G326050 - -
13 Sobic.002G003900 - -
14 Sobic.010G158766 - -
15 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
16 Sobic.002G218200 protein kinase domain containing protein, expressed -
17 Sobic.004G357066 - -
18 Sobic.001G535601 - -
19 Sobic.004G357033 - -
20 Sobic.004G055800 splicing factor, arginine/serine-rich 12, putative, expressed -


Gene co-expression network
sample Sobic001G197500 Sobic001G197500 Sobic004G199000 Sobic004G199000 Sobic001G197500--Sobic004G199000 Sobic001G139600 Sobic001G139600 Sobic001G197500--Sobic001G139600 Sobic010G096801 Sobic010G096801 Sobic001G197500--Sobic010G096801 Sobic001G220200 Sobic001G220200 Sobic001G197500--Sobic001G220200 Sobic009G004000 Sobic009G004000 Sobic001G197500--Sobic009G004000 Sobic002G140100 Sobic002G140100 Sobic001G197500--Sobic002G140100 Sobic001G261553 Sobic001G261553 Sobic001G197500--Sobic001G261553 Sobic010G206700 Sobic010G206700 Sobic001G197500--Sobic010G206700 Sobic005G232200 Sobic005G232200 Sobic001G197500--Sobic005G232200 Sobic004G199000--Sobic009G004000 Sobic004G199000--Sobic001G261553 Sobic004G199000--Sobic010G096801 Sobic004G199000--Sobic001G139600 Sobic004G199000--Sobic010G206700 Sobic002G003900 Sobic002G003900 Sobic004G199000--Sobic002G003900 Sobic004G357066 Sobic004G357066 Sobic004G199000--Sobic004G357066 Sobic004G199000--Sobic005G232200 Sobic001G019100 Sobic001G019100 Sobic004G199000--Sobic001G019100 Sobic001G139600--Sobic005G232200 Sobic001G139600--Sobic002G140100 Sobic002G218200 Sobic002G218200 Sobic001G139600--Sobic002G218200 Sobic001G139600--Sobic010G206700 Sobic010G158100 Sobic010G158100 Sobic001G139600--Sobic010G158100 Sobic001G410800 Sobic001G410800 Sobic001G139600--Sobic001G410800 Sobic002G326050 Sobic002G326050 Sobic001G139600--Sobic002G326050 Sobic001G139600--Sobic001G261553 Sobic006G227800 Sobic006G227800 Sobic001G139600--Sobic006G227800 Sobic010G096801--Sobic004G357066 Sobic010G096801--Sobic001G220200 Sobic001G206800 Sobic001G206800 Sobic010G096801--Sobic001G206800 Sobic010G096801--Sobic001G410800 Sobic010G096801--Sobic001G261553 Sobic004G357033 Sobic004G357033 Sobic010G096801--Sobic004G357033 Sobic010G158766 Sobic010G158766 Sobic010G096801--Sobic010G158766 Sobic010G096801--Sobic001G139600 Sobic010G096801--Sobic002G218200 Sobic001G220200--Sobic010G158766 Sobic001G220200--Sobic001G410800 Sobic001G220200--Sobic004G357033 Sobic004G344301 Sobic004G344301 Sobic001G220200--Sobic004G344301 Sobic001G220200--Sobic010G096801 Sobic007G224600 Sobic007G224600 Sobic001G220200--Sobic007G224600 Sobic001G519300 Sobic001G519300 Sobic001G220200--Sobic001G519300 Sobic009G225300 Sobic009G225300 Sobic001G220200--Sobic009G225300 Sobic001G220200--Sobic004G357066 Sobic009G004000--Sobic004G199000 Sobic009G004000--Sobic001G261553 Sobic009G004000--Sobic001G019100 Sobic008G150150 Sobic008G150150 Sobic009G004000--Sobic008G150150 Sobic009G004000--Sobic010G206700 Sobic010G275550 Sobic010G275550 Sobic009G004000--Sobic010G275550 Sobic002G037000 Sobic002G037000 Sobic009G004000--Sobic002G037000 Sobic004G351866 Sobic004G351866 Sobic009G004000--Sobic004G351866 Sobic009G004000--Sobic001G139600 Sobic002G140100--Sobic001G139600 Sobic002G140100--Sobic002G326050 Sobic002G140100--Sobic005G232200 Sobic002G140100--Sobic006G227800 Sobic002G140100--Sobic010G206700 Sobic002G140100--Sobic010G158100 Sobic002G140100--Sobic002G218200 Sobic002G140100--Sobic001G410800 Sobic002G140100--Sobic001G261553 Sobic001G261553--Sobic004G199000 Sobic001G261553--Sobic009G004000 Sobic001G261553--Sobic004G357066 Sobic001G261553--Sobic010G096801 Sobic001G261553--Sobic001G139600 Sobic001G261553--Sobic005G232200 Sobic001G261553--Sobic002G140100 Sobic004G225450 Sobic004G225450 Sobic001G261553--Sobic004G225450 Sobic001G261553--Sobic001G220200 Sobic010G206700--Sobic001G139600 Sobic010G206700--Sobic002G140100 Sobic006G185400 Sobic006G185400 Sobic010G206700--Sobic006G185400 Sobic004G330500 Sobic004G330500 Sobic010G206700--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic010G206700--Sobic005G189400 Sobic010G206700--Sobic005G232200 Sobic001G361500 Sobic001G361500 Sobic010G206700--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic010G206700--Sobic002G205201 Sobic007G152200 Sobic007G152200 Sobic010G206700--Sobic007G152200 Sobic005G232200--Sobic001G139600 Sobic005G232200--Sobic002G140100 Sobic005G232200--Sobic010G206700 Sobic005G232200--Sobic002G218200 Sobic005G232200--Sobic004G357066 Sobic005G232200--Sobic006G227800 Sobic005G232200--Sobic001G410800 Sobic005G232200--Sobic010G158100 Sobic005G232200--Sobic001G261553
Octagon: transcription factors


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