Gene annotation
Transcriptome id Sobic.001G236900.1
Synonym RLK, Sb01g020940
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
lectin-like receptor kinase, putative, expressed
UniProt C5X0G9
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF11
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os10g30540.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a016193 , Zm00025a045545 , Zm00025a006800 , Zm00025a006799 , Zm00025a048485
Brachypodium PNT61561 , KQJ96881 , PNT77097
Barley HORVU1Hr1G037000.1 , HORVU1Hr1G037000.3 , HORVU1Hr1G037000.2 , HORVU1Hr1G037000.5 , HORVU1Hr1G037000.4 , HORVU5Hr1G104840.1 , HORVU5Hr1G104840.2 , HORVU2Hr1G014930.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G128233 - -
2 Sobic.006G280700 - -
3 Sobic.006G257550 - -
4 Sobic.001G071900 - -
5 Sobic.001G499400 heavy metal-associated domain containing protein, expressed -
6 Sobic.001G237100 lectin-like receptor kinase, putative, expressed -
7 Sobic.010G244800 expressed protein -
8 Sobic.004G023800 verticillium wilt disease resistance protein, putative, expressed -
9 Sobic.010G247700 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
10 Sobic.004G143550 - -
11 Sobic.007G163200 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
12 Sobic.009G087360 - -
13 Sobic.003G024450 - -
14 Sobic.003G125200 - -
15 Sobic.004G194600 - -
16 Sobic.002G185000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
17 Sobic.001G504300 - -
18 Sobic.003G365450 - -
19 Sobic.002G323800 expressed protein -
20 Sobic.003G396050 - -


Gene co-expression network
sample Sobic001G236900 Sobic001G236900 Sobic006G128233 Sobic006G128233 Sobic001G236900--Sobic006G128233 Sobic006G280700 Sobic006G280700 Sobic001G236900--Sobic006G280700 Sobic006G257550 Sobic006G257550 Sobic001G236900--Sobic006G257550 Sobic001G071900 Sobic001G071900 Sobic001G236900--Sobic001G071900 Sobic001G499400 Sobic001G499400 Sobic001G236900--Sobic001G499400 Sobic001G237100 Sobic001G237100 Sobic001G236900--Sobic001G237100 Sobic010G244800 Sobic010G244800 Sobic001G236900--Sobic010G244800 Sobic004G023800 Sobic004G023800 Sobic001G236900--Sobic004G023800 Sobic010G247700 Sobic010G247700 Sobic001G236900--Sobic010G247700 Sobic006G128233--Sobic001G499400 Sobic002G323800 Sobic002G323800 Sobic006G128233--Sobic002G323800 Sobic006G128233--Sobic006G280700 Sobic004G304475 Sobic004G304475 Sobic006G128233--Sobic004G304475 Sobic006G128233--Sobic010G247700 Sobic006G174725 Sobic006G174725 Sobic006G128233--Sobic006G174725 Sobic006G128233--Sobic004G023800 Sobic009G087360 Sobic009G087360 Sobic006G128233--Sobic009G087360 Sobic003G125200 Sobic003G125200 Sobic006G128233--Sobic003G125200 Sobic006G280700--Sobic002G323800 Sobic006G280700--Sobic006G128233 Sobic006G280700--Sobic010G247700 Sobic006G280700--Sobic009G087360 Sobic006G280700--Sobic006G174725 Sobic001G284300 Sobic001G284300 Sobic006G280700--Sobic001G284300 Sobic003G361150 Sobic003G361150 Sobic006G280700--Sobic003G361150 Sobic004G295200 Sobic004G295200 Sobic006G280700--Sobic004G295200 Sobic007G193000 Sobic007G193000 Sobic006G280700--Sobic007G193000 Sobic008G001600 Sobic008G001600 Sobic006G257550--Sobic008G001600 Sobic002G235000 Sobic002G235000 Sobic006G257550--Sobic002G235000 Sobic006G257550--Sobic006G128233 Sobic010G028366 Sobic010G028366 Sobic006G257550--Sobic010G028366 Sobic003G123950 Sobic003G123950 Sobic006G257550--Sobic003G123950 Sobic007G163200 Sobic007G163200 Sobic006G257550--Sobic007G163200 Sobic006G257550--Sobic001G499400 Sobic001G222100 Sobic001G222100 Sobic006G257550--Sobic001G222100 Sobic001G258700 Sobic001G258700 Sobic006G257550--Sobic001G258700 Sobic009G178000 Sobic009G178000 Sobic001G071900--Sobic009G178000 Sobic001G071900--Sobic003G125200 Sobic001G071900--Sobic002G323800 Sobic001G071900--Sobic002G235000 Sobic001G071900--Sobic006G128233 Sobic001G025201 Sobic001G025201 Sobic001G071900--Sobic001G025201 Sobic001G071900--Sobic006G280700 Sobic002G185000 Sobic002G185000 Sobic001G071900--Sobic002G185000 Sobic003G353050 Sobic003G353050 Sobic001G071900--Sobic003G353050 Sobic001G499400--Sobic006G128233 Sobic001G499400--Sobic004G304475 Sobic001G499400--Sobic004G023800 Sobic003G396050 Sobic003G396050 Sobic001G499400--Sobic003G396050 Sobic006G192150 Sobic006G192150 Sobic001G499400--Sobic006G192150 Sobic003G024450 Sobic003G024450 Sobic001G499400--Sobic003G024450 Sobic004G143550 Sobic004G143550 Sobic001G499400--Sobic004G143550 Sobic001G499400--Sobic009G087360 Sobic006G033601 Sobic006G033601 Sobic001G499400--Sobic006G033601 Sobic001G205950 Sobic001G205950 Sobic001G237100--Sobic001G205950 Sobic008G156800 Sobic008G156800 Sobic001G237100--Sobic008G156800 Sobic008G116800 Sobic008G116800 Sobic001G237100--Sobic008G116800 Sobic003G238750 Sobic003G238750 Sobic001G237100--Sobic003G238750 Sobic010G053700 Sobic010G053700 Sobic001G237100--Sobic010G053700 Sobic001G090600 Sobic001G090600 Sobic001G237100--Sobic001G090600 Sobic010G176000 Sobic010G176000 Sobic001G237100--Sobic010G176000 Sobic003G406850 Sobic003G406850 Sobic001G237100--Sobic003G406850 Sobic001G062066 Sobic001G062066 Sobic001G237100--Sobic001G062066 Sobic008G056000 Sobic008G056000 Sobic010G244800--Sobic008G056000 Sobic006G065000 Sobic006G065000 Sobic010G244800--Sobic006G065000 Sobic001G504300 Sobic001G504300 Sobic010G244800--Sobic001G504300 Sobic006G064900 Sobic006G064900 Sobic010G244800--Sobic006G064900 Sobic001G440401 Sobic001G440401 Sobic010G244800--Sobic001G440401 Sobic002G025900 Sobic002G025900 Sobic010G244800--Sobic002G025900 Sobic010G244800--Sobic004G023800 Sobic003G288700 Sobic003G288700 Sobic010G244800--Sobic003G288700 Sobic001G087850 Sobic001G087850 Sobic010G244800--Sobic001G087850 Sobic004G023800--Sobic003G024450 Sobic004G023800--Sobic004G143550 Sobic004G023800--Sobic003G288700 Sobic004G023800--Sobic006G065000 Sobic008G053800 Sobic008G053800 Sobic004G023800--Sobic008G053800 Sobic004G023800--Sobic001G440401 Sobic004G092950 Sobic004G092950 Sobic004G023800--Sobic004G092950 Sobic009G184450 Sobic009G184450 Sobic004G023800--Sobic009G184450 Sobic010G149000 Sobic010G149000 Sobic004G023800--Sobic010G149000 Sobic010G247700--Sobic002G323800 Sobic010G247700--Sobic006G280700 Sobic010G247700--Sobic001G284300 Sobic010G247700--Sobic006G128233 Sobic010G247700--Sobic006G174725 Sobic004G115200 Sobic004G115200 Sobic010G247700--Sobic004G115200 Sobic010G247700--Sobic004G295200 Sobic001G141000 Sobic001G141000 Sobic010G247700--Sobic001G141000 Sobic010G247700--Sobic001G025201
Octagon: transcription factors


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