Gene annotation
Transcriptome id Sobic.001G267300.1
Synonym UBQ10, Sb01g026245
Functional annotation ubiquitin family protein, putative, expressed
UniProt A0A1B6QL86
Pfam PF00240
Panther DB PTHR10666
NCBI CDD KOG0001; Ubiquitin and ubiquitin-like proteins KOG0005Ubiquitin-like protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G05320 : polyubiquitin 10
RAP-DB (Rice) LOC_Os06g46770.2 : ubiquitin family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G038850 - -
2 Sobic.010G124200 expressed protein -
3 Sobic.003G058600 cytochrome P450, putative, expressed -
4 Sobic.005G212400 Leucine Rich Repeat family protein, expressed -
5 Sobic.002G415300 - -
6 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
7 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
9 Sobic.002G415400 - -
10 Sobic.005G080050 - -
11 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
12 Sobic.001G435600 - -
13 Sobic.002G033000 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.003G383600 - -
15 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
16 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
18 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P
19 Sobic.009G115050 - -
20 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -


Gene co-expression network
sample Sobic001G267300 Sobic001G267300 Sobic006G038850 Sobic006G038850 Sobic001G267300--Sobic006G038850 Sobic010G124200 Sobic010G124200 Sobic001G267300--Sobic010G124200 Sobic003G058600 Sobic003G058600 Sobic001G267300--Sobic003G058600 Sobic005G212400 Sobic005G212400 Sobic001G267300--Sobic005G212400 Sobic002G415300 Sobic002G415300 Sobic001G267300--Sobic002G415300 Sobic002G329500 Sobic002G329500 Sobic001G267300--Sobic002G329500 Sobic001G127700 Sobic001G127700 Sobic001G267300--Sobic001G127700 Sobic008G123600 Sobic008G123600 Sobic001G267300--Sobic008G123600 Sobic002G415400 Sobic002G415400 Sobic001G267300--Sobic002G415400 Sobic001G379300 Sobic001G379300 Sobic006G038850--Sobic001G379300 Sobic006G238100 Sobic006G238100 Sobic006G038850--Sobic006G238100 Sobic002G416950 Sobic002G416950 Sobic006G038850--Sobic002G416950 Sobic001G255300 Sobic001G255300 Sobic006G038850--Sobic001G255300 Sobic004G060700 Sobic004G060700 Sobic006G038850--Sobic004G060700 Sobic002G141100 Sobic002G141100 Sobic006G038850--Sobic002G141100 Sobic006G038850--Sobic002G415300 Sobic006G038850--Sobic002G415400 Sobic008G163200 Sobic008G163200 Sobic006G038850--Sobic008G163200 Sobic010G124200--Sobic005G212400 Sobic006G172700 Sobic006G172700 Sobic010G124200--Sobic006G172700 Sobic010G124200--Sobic001G127700 Sobic006G001400 Sobic006G001400 Sobic010G124200--Sobic006G001400 Sobic002G397400 Sobic002G397400 Sobic010G124200--Sobic002G397400 Sobic005G147800 Sobic005G147800 Sobic010G124200--Sobic005G147800 Sobic009G059100 Sobic009G059100 Sobic010G124200--Sobic009G059100 Sobic002G020100 Sobic002G020100 Sobic010G124200--Sobic002G020100 Sobic007G142300 Sobic007G142300 Sobic010G124200--Sobic007G142300 Sobic003G058600--Sobic004G060700 Sobic001G003600 Sobic001G003600 Sobic003G058600--Sobic001G003600 Sobic001G435600 Sobic001G435600 Sobic003G058600--Sobic001G435600 Sobic009G115050 Sobic009G115050 Sobic003G058600--Sobic009G115050 Sobic007G009600 Sobic007G009600 Sobic003G058600--Sobic007G009600 Sobic003G058600--Sobic002G329500 Sobic003G058600--Sobic006G172700 Sobic003G058600--Sobic002G415400 Sobic003G058600--Sobic002G415300 Sobic005G212400--Sobic001G127700 Sobic005G212400--Sobic002G415400 Sobic005G212400--Sobic010G124200 Sobic005G212400--Sobic002G415300 Sobic005G212400--Sobic006G172700 Sobic005G212400--Sobic009G115050 Sobic005G212400--Sobic001G435600 Sobic005G212400--Sobic004G060700 Sobic005G212400--Sobic002G329500 Sobic002G415300--Sobic002G415400 Sobic002G415300--Sobic004G060700 Sobic002G415300--Sobic008G163200 Sobic002G415300--Sobic001G435600 Sobic003G068300 Sobic003G068300 Sobic002G415300--Sobic003G068300 Sobic002G415300--Sobic002G416950 Sobic002G415300--Sobic009G115050 Sobic002G415300--Sobic002G329500 Sobic007G170800 Sobic007G170800 Sobic002G415300--Sobic007G170800 Sobic002G329500--Sobic009G115050 Sobic002G329500--Sobic002G415400 Sobic002G329500--Sobic001G435600 Sobic002G329500--Sobic002G415300 Sobic002G329500--Sobic001G003600 Sobic002G329500--Sobic004G060700 Sobic002G329500--Sobic001G127700 Sobic002G329500--Sobic003G058600 Sobic004G076000 Sobic004G076000 Sobic002G329500--Sobic004G076000 Sobic001G127700--Sobic006G172700 Sobic001G127700--Sobic009G115050 Sobic001G127700--Sobic005G212400 Sobic001G127700--Sobic004G060700 Sobic001G127700--Sobic001G003600 Sobic001G127700--Sobic001G435600 Sobic001G127700--Sobic007G170800 Sobic001G127700--Sobic002G329500 Sobic001G127700--Sobic002G415400 Sobic008G123600--Sobic004G076000 Sobic003G383600 Sobic003G383600 Sobic008G123600--Sobic003G383600 Sobic008G123600--Sobic001G003600 Sobic001G323801 Sobic001G323801 Sobic008G123600--Sobic001G323801 Sobic001G069500 Sobic001G069500 Sobic008G123600--Sobic001G069500 Sobic008G123600--Sobic001G435600 Sobic008G123600--Sobic009G115050 Sobic003G295800 Sobic003G295800 Sobic008G123600--Sobic003G295800 Sobic008G123600--Sobic006G172700 Sobic002G415400--Sobic002G415300 Sobic002G415400--Sobic001G435600 Sobic002G415400--Sobic004G060700 Sobic002G415400--Sobic003G068300 Sobic002G415400--Sobic008G163200 Sobic002G415400--Sobic009G115050 Sobic002G415400--Sobic002G416950 Sobic002G415400--Sobic002G329500 Sobic002G415400--Sobic006G238100
Octagon: transcription factors


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