Gene annotation
Transcriptome id Sobic.001G455250.1
Synonym -
Functional annotation -
UniProt A0A1Z5SAR0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G340566 - -
2 Sobic.008G174500 expressed protein -
3 Sobic.001G427900 ASC1, putative, expressed -
4 Sobic.006G100266 - -
5 Sobic.001G534400 - -
6 Sobic.003G062101 - -
7 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
8 Sobic.002G221100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
10 Sobic.002G099866 - -
11 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -
12 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
13 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
14 Sobic.010G257500 expressed protein -
15 Sobic.010G013400 exosome complex exonuclease rrp4, putative, expressed -
16 Sobic.006G257600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
17 Sobic.002G354800 zinc finger family protein, putative, expressed -
18 Sobic.008G007900 expressed protein -
19 Sobic.009G234500 similar to Cold acclimation protein COR413-TM1(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cold acclimation protein WCOR413, putative, expressed -
20 Sobic.003G101200 paired amphipathic helix repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G455250 Sobic001G455250 Sobic004G340566 Sobic004G340566 Sobic001G455250--Sobic004G340566 Sobic008G174500 Sobic008G174500 Sobic001G455250--Sobic008G174500 Sobic001G427900 Sobic001G427900 Sobic001G455250--Sobic001G427900 Sobic006G100266 Sobic006G100266 Sobic001G455250--Sobic006G100266 Sobic001G534400 Sobic001G534400 Sobic001G455250--Sobic001G534400 Sobic003G062101 Sobic003G062101 Sobic001G455250--Sobic003G062101 Sobic009G156200 Sobic009G156200 Sobic001G455250--Sobic009G156200 Sobic002G221100 Sobic002G221100 Sobic001G455250--Sobic002G221100 Sobic003G042200 Sobic003G042200 Sobic001G455250--Sobic003G042200 Sobic009G132400 Sobic009G132400 Sobic004G340566--Sobic009G132400 Sobic002G099866 Sobic002G099866 Sobic004G340566--Sobic002G099866 Sobic003G101200 Sobic003G101200 Sobic004G340566--Sobic003G101200 Sobic001G509100 Sobic001G509100 Sobic004G340566--Sobic001G509100 Sobic001G324800 Sobic001G324800 Sobic004G340566--Sobic001G324800 Sobic004G262100 Sobic004G262100 Sobic004G340566--Sobic004G262100 Sobic009G234500 Sobic009G234500 Sobic004G340566--Sobic009G234500 Sobic001G452100 Sobic001G452100 Sobic004G340566--Sobic001G452100 Sobic002G266600 Sobic002G266600 Sobic004G340566--Sobic002G266600 Sobic008G174500--Sobic003G042200 Sobic008G174500--Sobic003G062101 Sobic001G194100 Sobic001G194100 Sobic008G174500--Sobic001G194100 Sobic006G184200 Sobic006G184200 Sobic008G174500--Sobic006G184200 Sobic010G009600 Sobic010G009600 Sobic008G174500--Sobic010G009600 Sobic008G174500--Sobic009G156200 Sobic004G014100 Sobic004G014100 Sobic008G174500--Sobic004G014100 Sobic010G223500 Sobic010G223500 Sobic008G174500--Sobic010G223500 Sobic008G174500--Sobic006G100266 Sobic005G171900 Sobic005G171900 Sobic001G427900--Sobic005G171900 Sobic008G013200 Sobic008G013200 Sobic001G427900--Sobic008G013200 Sobic010G051800 Sobic010G051800 Sobic001G427900--Sobic010G051800 Sobic001G025700 Sobic001G025700 Sobic001G427900--Sobic001G025700 Sobic003G255700 Sobic003G255700 Sobic001G427900--Sobic003G255700 Sobic003G308300 Sobic003G308300 Sobic001G427900--Sobic003G308300 Sobic001G427900--Sobic004G340566 Sobic002G014032 Sobic002G014032 Sobic001G427900--Sobic002G014032 Sobic001G449000 Sobic001G449000 Sobic001G427900--Sobic001G449000 Sobic006G100266--Sobic003G255700 Sobic006G100266--Sobic003G308300 Sobic001G305900 Sobic001G305900 Sobic006G100266--Sobic001G305900 Sobic002G274700 Sobic002G274700 Sobic006G100266--Sobic002G274700 Sobic003G270100 Sobic003G270100 Sobic006G100266--Sobic003G270100 Sobic008G087200 Sobic008G087200 Sobic006G100266--Sobic008G087200 Sobic002G322400 Sobic002G322400 Sobic006G100266--Sobic002G322400 Sobic009G186700 Sobic009G186700 Sobic006G100266--Sobic009G186700 Sobic006G100266--Sobic010G009600 Sobic010G257500 Sobic010G257500 Sobic001G534400--Sobic010G257500 Sobic003G343200 Sobic003G343200 Sobic001G534400--Sobic003G343200 Sobic001G534400--Sobic010G009600 Sobic001G534400--Sobic008G087200 Sobic001G534400--Sobic004G014100 Sobic005G160200 Sobic005G160200 Sobic001G534400--Sobic005G160200 Sobic001G534400--Sobic006G184200 Sobic001G534400--Sobic008G174500 Sobic002G271400 Sobic002G271400 Sobic001G534400--Sobic002G271400 Sobic003G062101--Sobic008G174500 Sobic003G062101--Sobic001G194100 Sobic003G062101--Sobic003G042200 Sobic003G062101--Sobic004G262100 Sobic004G065800 Sobic004G065800 Sobic003G062101--Sobic004G065800 Sobic003G062101--Sobic009G156200 Sobic003G062101--Sobic010G223500 Sobic004G339900 Sobic004G339900 Sobic003G062101--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic003G062101--Sobic004G071050 Sobic009G156200--Sobic004G262100 Sobic001G053700 Sobic001G053700 Sobic009G156200--Sobic001G053700 Sobic002G349000 Sobic002G349000 Sobic009G156200--Sobic002G349000 Sobic002G360900 Sobic002G360900 Sobic009G156200--Sobic002G360900 Sobic009G156200--Sobic003G042200 Sobic009G156200--Sobic004G340566 Sobic002G381750 Sobic002G381750 Sobic009G156200--Sobic002G381750 Sobic009G156200--Sobic009G234500 Sobic009G156200--Sobic003G062101 Sobic002G221100--Sobic002G349000 Sobic002G212400 Sobic002G212400 Sobic002G221100--Sobic002G212400 Sobic004G218000 Sobic004G218000 Sobic002G221100--Sobic004G218000 Sobic003G057650 Sobic003G057650 Sobic002G221100--Sobic003G057650 Sobic002G221100--Sobic002G360900 Sobic002G221100--Sobic001G324800 Sobic002G221100--Sobic009G156200 Sobic002G221100--Sobic003G042200 Sobic005G109800 Sobic005G109800 Sobic002G221100--Sobic005G109800 Sobic003G042200--Sobic008G174500 Sobic003G042200--Sobic001G194100 Sobic003G042200--Sobic003G062101 Sobic003G042200--Sobic009G156200 Sobic003G042200--Sobic006G184200 Sobic003G379900 Sobic003G379900 Sobic003G042200--Sobic003G379900 Sobic003G042200--Sobic010G009600 Sobic003G042200--Sobic002G349000 Sobic002G238800 Sobic002G238800 Sobic003G042200--Sobic002G238800
Octagon: transcription factors


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