Gene annotation
Transcriptome id Sobic.002G221100.1
Synonym Sb02g026210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X264
Pfam -
Panther DB PTHR33237 PTHR33237:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14760 : -
RAP-DB (Rice) LOC_Os02g21640.1 : expressed protein
MaizeGDB (Corn) Zm00025a014048 , Zm00025a047219
Brachypodium KQJ94501
Barley -
Wheat TraesCS7D02G448600 , TraesCS7A02G460700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G221100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
2 Sobic.002G212400 zinc finger, C3HC4 type family protein, expressed -
3 Sobic.004G218000 SET domain containing protein, expressed -
4 Sobic.003G057650 - -
5 Sobic.002G360900 GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
6 Sobic.001G324800 cysteine proteinase inhibitor 8 precursor, putative, expressed -
7 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
8 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
9 Sobic.005G109800 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
10 Sobic.009G039500 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
11 Sobic.002G061200 OsFBX237 - F-box domain containing protein, expressed -
12 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
13 Sobic.003G135201 - -
14 Sobic.007G109400 response regulator receiver domain containing protein, expressed K14492: two-component response regulator ARR-A family
15 Sobic.002G354800 zinc finger family protein, putative, expressed -
16 Sobic.005G109900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
17 Sobic.003G438300 - -
18 Sobic.005G174600 - -
19 Sobic.008G174500 expressed protein -
20 Sobic.005G174700 DEFL74 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic002G221100 Sobic002G221100 Sobic002G349000 Sobic002G349000 Sobic002G221100--Sobic002G349000 Sobic002G212400 Sobic002G212400 Sobic002G221100--Sobic002G212400 Sobic004G218000 Sobic004G218000 Sobic002G221100--Sobic004G218000 Sobic003G057650 Sobic003G057650 Sobic002G221100--Sobic003G057650 Sobic002G360900 Sobic002G360900 Sobic002G221100--Sobic002G360900 Sobic001G324800 Sobic001G324800 Sobic002G221100--Sobic001G324800 Sobic009G156200 Sobic009G156200 Sobic002G221100--Sobic009G156200 Sobic003G042200 Sobic003G042200 Sobic002G221100--Sobic003G042200 Sobic005G109800 Sobic005G109800 Sobic002G221100--Sobic005G109800 Sobic002G349000--Sobic002G221100 Sobic002G349000--Sobic001G324800 Sobic006G143300 Sobic006G143300 Sobic002G349000--Sobic006G143300 Sobic002G349000--Sobic004G218000 Sobic002G354800 Sobic002G354800 Sobic002G349000--Sobic002G354800 Sobic004G014100 Sobic004G014100 Sobic002G349000--Sobic004G014100 Sobic002G349000--Sobic009G156200 Sobic001G425900 Sobic001G425900 Sobic002G349000--Sobic001G425900 Sobic004G262100 Sobic004G262100 Sobic002G349000--Sobic004G262100 Sobic002G212400--Sobic005G109800 Sobic009G039500 Sobic009G039500 Sobic002G212400--Sobic009G039500 Sobic003G415800 Sobic003G415800 Sobic002G212400--Sobic003G415800 Sobic002G061200 Sobic002G061200 Sobic002G212400--Sobic002G061200 Sobic005G109900 Sobic005G109900 Sobic002G212400--Sobic005G109900 Sobic007G109400 Sobic007G109400 Sobic002G212400--Sobic007G109400 Sobic005G174600 Sobic005G174600 Sobic002G212400--Sobic005G174600 Sobic009G006800 Sobic009G006800 Sobic002G212400--Sobic009G006800 Sobic005G149800 Sobic005G149800 Sobic002G212400--Sobic005G149800 Sobic003G217300 Sobic003G217300 Sobic004G218000--Sobic003G217300 Sobic007G056900 Sobic007G056900 Sobic004G218000--Sobic007G056900 Sobic005G164800 Sobic005G164800 Sobic004G218000--Sobic005G164800 Sobic004G218000--Sobic002G349000 Sobic004G218000--Sobic002G221100 Sobic005G041900 Sobic005G041900 Sobic004G218000--Sobic005G041900 Sobic003G022900 Sobic003G022900 Sobic004G218000--Sobic003G022900 Sobic009G042600 Sobic009G042600 Sobic004G218000--Sobic009G042600 Sobic010G180200 Sobic010G180200 Sobic004G218000--Sobic010G180200 Sobic003G057650--Sobic002G212400 Sobic009G039700 Sobic009G039700 Sobic003G057650--Sobic009G039700 Sobic001G301100 Sobic001G301100 Sobic003G057650--Sobic001G301100 Sobic003G057650--Sobic005G174600 Sobic005G148700 Sobic005G148700 Sobic003G057650--Sobic005G148700 Sobic005G221200 Sobic005G221200 Sobic003G057650--Sobic005G221200 Sobic003G057650--Sobic009G039500 Sobic003G057650--Sobic005G109900 Sobic003G057650--Sobic005G109800 Sobic008G088881 Sobic008G088881 Sobic002G360900--Sobic008G088881 Sobic010G107300 Sobic010G107300 Sobic002G360900--Sobic010G107300 Sobic005G083160 Sobic005G083160 Sobic002G360900--Sobic005G083160 Sobic001G233900 Sobic001G233900 Sobic002G360900--Sobic001G233900 Sobic005G226150 Sobic005G226150 Sobic002G360900--Sobic005G226150 Sobic010G022600 Sobic010G022600 Sobic002G360900--Sobic010G022600 Sobic002G360900--Sobic001G324800 Sobic003G323000 Sobic003G323000 Sobic002G360900--Sobic003G323000 Sobic003G303500 Sobic003G303500 Sobic002G360900--Sobic003G303500 Sobic003G092600 Sobic003G092600 Sobic001G324800--Sobic003G092600 Sobic001G394900 Sobic001G394900 Sobic001G324800--Sobic001G394900 Sobic002G015800 Sobic002G015800 Sobic001G324800--Sobic002G015800 Sobic001G324800--Sobic002G360900 Sobic001G324800--Sobic004G262100 Sobic006G015800 Sobic006G015800 Sobic001G324800--Sobic006G015800 Sobic001G324800--Sobic010G022600 Sobic001G509100 Sobic001G509100 Sobic001G324800--Sobic001G509100 Sobic001G324800--Sobic010G107300 Sobic009G156200--Sobic004G262100 Sobic001G053700 Sobic001G053700 Sobic009G156200--Sobic001G053700 Sobic009G156200--Sobic002G349000 Sobic009G156200--Sobic002G360900 Sobic009G156200--Sobic003G042200 Sobic004G340566 Sobic004G340566 Sobic009G156200--Sobic004G340566 Sobic002G381750 Sobic002G381750 Sobic009G156200--Sobic002G381750 Sobic009G234500 Sobic009G234500 Sobic009G156200--Sobic009G234500 Sobic003G062101 Sobic003G062101 Sobic009G156200--Sobic003G062101 Sobic008G174500 Sobic008G174500 Sobic003G042200--Sobic008G174500 Sobic001G194100 Sobic001G194100 Sobic003G042200--Sobic001G194100 Sobic003G042200--Sobic003G062101 Sobic003G042200--Sobic009G156200 Sobic006G184200 Sobic006G184200 Sobic003G042200--Sobic006G184200 Sobic003G379900 Sobic003G379900 Sobic003G042200--Sobic003G379900 Sobic010G009600 Sobic010G009600 Sobic003G042200--Sobic010G009600 Sobic003G042200--Sobic002G349000 Sobic002G238800 Sobic002G238800 Sobic003G042200--Sobic002G238800 Sobic005G109800--Sobic009G039500 Sobic005G109800--Sobic005G109900 Sobic005G109800--Sobic002G061200 Sobic005G109800--Sobic007G109400 Sobic005G109800--Sobic005G174600 Sobic005G109800--Sobic009G006800 Sobic005G109800--Sobic003G415800 Sobic005G141500 Sobic005G141500 Sobic005G109800--Sobic005G141500 Sobic005G109800--Sobic005G221200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.