Gene annotation
Transcriptome id Sobic.001G485000.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5SBF0
Pfam PF16135
Panther DB PTHR24098 PTHR24098:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37520 : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
RAP-DB (Rice) LOC_Os03g17050.1 : expressed protein
MaizeGDB (Corn) Zm00025a000887 , Zm00025a001879
Brachypodium KQK22308 , KQK22309 , PNT77658 , PNT77657
Barley HORVU4Hr1G059010.22 , HORVU4Hr1G059010.23 , HORVU4Hr1G059010.20 , HORVU4Hr1G059010.21 , HORVU4Hr1G059010.26 , HORVU4Hr1G059010.27 , HORVU4Hr1G059010.24 , HORVU4Hr1G059010.25 , HORVU4Hr1G059010.28 , HORVU4Hr1G059010.29 , HORVU4Hr1G059010.9 , HORVU4Hr1G059010.8 , HORVU4Hr1G059010.3 , HORVU4Hr1G059010.2 , HORVU4Hr1G059010.1 , HORVU4Hr1G059010.7 , HORVU4Hr1G059010.6 , HORVU4Hr1G059010.5 , HORVU4Hr1G059010.4 , HORVU4Hr1G059010.17 , HORVU4Hr1G059010.19 , HORVU4Hr1G059010.13 , HORVU4Hr1G059010.12 , HORVU4Hr1G059010.11 , HORVU4Hr1G059010.10 , HORVU4Hr1G059010.16 , HORVU4Hr1G059010.15 , HORVU4Hr1G059010.18 , HORVU4Hr1G059010.35 , HORVU4Hr1G059010.34 , HORVU4Hr1G059010.36 , HORVU4Hr1G059010.31 , HORVU4Hr1G059010.33 , HORVU4Hr1G059010.32 , HORVU4Hr1G059010.14
Wheat TraesCS4B02G204700 , TraesCS4A02G099600 , TraesCS4A02G099600 , TraesCS4D02G205600 , TraesCS4D02G205600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G015000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nuclear antigen, putative, expressed -
2 Sobic.001G103600 gp176, putative, expressed -
3 Sobic.009G240500 lipase class 3 family protein, putative, expressed -
4 Sobic.008G095500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
5 Sobic.003G018000 expressed protein -
6 Sobic.001G242200 MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
8 Sobic.002G013550 - K08770: ubiquitin C
9 Sobic.009G149100 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
10 Sobic.004G003300 integral membrane protein DUF6 containing protein, expressed -
11 Sobic.009G017600 cupin domain containing protein, expressed -
12 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.004G335400 expressed protein -
14 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
15 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -
16 Sobic.005G041500 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
17 Sobic.001G021200 elongation factor, putative, expressed -
18 Sobic.006G276600 auxin-induced protein 5NG4, putative, expressed -
19 Sobic.005G058000 expressed protein -
20 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G485000 Sobic001G485000 Sobic001G015000 Sobic001G015000 Sobic001G485000--Sobic001G015000 Sobic001G103600 Sobic001G103600 Sobic001G485000--Sobic001G103600 Sobic009G240500 Sobic009G240500 Sobic001G485000--Sobic009G240500 Sobic008G095500 Sobic008G095500 Sobic001G485000--Sobic008G095500 Sobic003G018000 Sobic003G018000 Sobic001G485000--Sobic003G018000 Sobic001G242200 Sobic001G242200 Sobic001G485000--Sobic001G242200 Sobic004G002700 Sobic004G002700 Sobic001G485000--Sobic004G002700 Sobic002G013550 Sobic002G013550 Sobic001G485000--Sobic002G013550 Sobic009G149100 Sobic009G149100 Sobic001G485000--Sobic009G149100 Sobic004G254700 Sobic004G254700 Sobic001G015000--Sobic004G254700 Sobic001G015000--Sobic001G103600 Sobic002G019300 Sobic002G019300 Sobic001G015000--Sobic002G019300 Sobic001G015000--Sobic009G149100 Sobic006G276600 Sobic006G276600 Sobic001G015000--Sobic006G276600 Sobic004G335400 Sobic004G335400 Sobic001G015000--Sobic004G335400 Sobic008G071700 Sobic008G071700 Sobic001G015000--Sobic008G071700 Sobic005G041500 Sobic005G041500 Sobic001G015000--Sobic005G041500 Sobic002G298600 Sobic002G298600 Sobic001G015000--Sobic002G298600 Sobic001G103600--Sobic009G149100 Sobic001G103600--Sobic004G335400 Sobic001G103600--Sobic005G041500 Sobic001G103600--Sobic002G298600 Sobic001G103600--Sobic002G019300 Sobic001G103600--Sobic006G276600 Sobic001G103600--Sobic004G002700 Sobic001G021200 Sobic001G021200 Sobic001G103600--Sobic001G021200 Sobic001G103600--Sobic008G095500 Sobic009G240500--Sobic001G242200 Sobic009G240500--Sobic009G149100 Sobic005G006900 Sobic005G006900 Sobic009G240500--Sobic005G006900 Sobic009G240500--Sobic008G071700 Sobic009G240500--Sobic004G254700 Sobic009G240500--Sobic006G276600 Sobic009G240500--Sobic002G019300 Sobic009G240500--Sobic005G041500 Sobic009G240500--Sobic004G002700 Sobic008G088500 Sobic008G088500 Sobic008G095500--Sobic008G088500 Sobic008G168500 Sobic008G168500 Sobic008G095500--Sobic008G168500 Sobic002G096600 Sobic002G096600 Sobic008G095500--Sobic002G096600 Sobic005G058000 Sobic005G058000 Sobic008G095500--Sobic005G058000 Sobic001G364300 Sobic001G364300 Sobic008G095500--Sobic001G364300 Sobic005G058200 Sobic005G058200 Sobic008G095500--Sobic005G058200 Sobic008G095500--Sobic001G021200 Sobic005G007200 Sobic005G007200 Sobic008G095500--Sobic005G007200 Sobic008G177001 Sobic008G177001 Sobic008G095500--Sobic008G177001 Sobic003G018000--Sobic002G013550 Sobic001G518900 Sobic001G518900 Sobic003G018000--Sobic001G518900 Sobic003G018000--Sobic001G103600 Sobic003G018000--Sobic009G149100 Sobic003G018000--Sobic008G095500 Sobic003G018000--Sobic004G335400 Sobic003G018000--Sobic004G002700 Sobic003G018000--Sobic005G041500 Sobic003G018000--Sobic006G276600 Sobic001G242200--Sobic009G240500 Sobic001G242200--Sobic002G013550 Sobic001G242200--Sobic008G071700 Sobic001G242200--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic001G242200--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic001G242200--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic001G242200--Sobic005G212300 Sobic003G354850 Sobic003G354850 Sobic001G242200--Sobic003G354850 Sobic001G242200--Sobic009G149100 Sobic004G003300 Sobic004G003300 Sobic004G002700--Sobic004G003300 Sobic010G202400 Sobic010G202400 Sobic004G002700--Sobic010G202400 Sobic004G002700--Sobic001G021200 Sobic001G241700 Sobic001G241700 Sobic004G002700--Sobic001G241700 Sobic004G002700--Sobic005G058000 Sobic004G002700--Sobic002G096600 Sobic004G002700--Sobic008G095500 Sobic004G002700--Sobic008G088500 Sobic004G002700--Sobic009G149100 Sobic002G013550--Sobic009G149100 Sobic002G013550--Sobic004G254700 Sobic002G013550--Sobic008G071700 Sobic002G013550--Sobic002G019300 Sobic002G013550--Sobic006G276600 Sobic002G013550--Sobic004G335400 Sobic002G013550--Sobic005G006900 Sobic002G013550--Sobic002G298600 Sobic002G013550--Sobic005G041500 Sobic009G149100--Sobic006G276600 Sobic009G149100--Sobic002G019300 Sobic009G149100--Sobic004G335400 Sobic009G149100--Sobic005G041500 Sobic009G149100--Sobic004G254700 Sobic009G149100--Sobic002G298600 Sobic009G149100--Sobic001G241700 Sobic009G149100--Sobic008G071700 Sobic009G149100--Sobic001G103600
Octagon: transcription factors


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