Gene annotation
Transcriptome id Sobic.001G485500.1
Synonym
Functional annotation -
UniProt A0A1Z5SB37
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12040 : Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
RAP-DB (Rice) LOC_Os03g07910.1 : nitrilase, putative, expressed
MaizeGDB (Corn) Zm00025a000882 , Zm00025a053309
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G053350 - -
2 Sobic.004G215200 expressed protein -
3 Sobic.003G275400 B3 DNA binding domain containing protein, expressed -
4 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
5 Sobic.010G036901 - -
6 Sobic.009G168200 expressed protein -
7 Sobic.005G201200 - -
8 Sobic.009G163400 growth regulator related protein, putative, expressed -
9 Sobic.010G062900 expressed protein -
10 Sobic.008G121501 - -
11 Sobic.001G499500 la domain containing protein, putative, expressed K18757: la-related protein 1
12 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
13 Sobic.002G383700 4-alpha-glucanotransferase, chloroplast precursor, putative, expressed K00705: 4-alpha-glucanotransferase
14 Sobic.008G007800 - -
15 Sobic.008G160600 tesmin/TSO1-like CXC domain containing protein, expressed -
16 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.003G042200 uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
19 Sobic.009G072033 - -
20 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3


Gene co-expression network
sample Sobic001G485500 Sobic001G485500 Sobic001G053350 Sobic001G053350 Sobic001G485500--Sobic001G053350 Sobic004G215200 Sobic004G215200 Sobic001G485500--Sobic004G215200 Sobic003G275400 Sobic003G275400 Sobic001G485500--Sobic003G275400 Sobic010G255400 Sobic010G255400 Sobic001G485500--Sobic010G255400 Sobic010G036901 Sobic010G036901 Sobic001G485500--Sobic010G036901 Sobic009G168200 Sobic009G168200 Sobic001G485500--Sobic009G168200 Sobic005G201200 Sobic005G201200 Sobic001G485500--Sobic005G201200 Sobic009G163400 Sobic009G163400 Sobic001G485500--Sobic009G163400 Sobic010G062900 Sobic010G062900 Sobic001G485500--Sobic010G062900 Sobic001G053350--Sobic001G485500 Sobic001G053350--Sobic004G215200 Sobic001G053350--Sobic010G255400 Sobic001G053350--Sobic005G201200 Sobic008G121501 Sobic008G121501 Sobic001G053350--Sobic008G121501 Sobic008G007800 Sobic008G007800 Sobic001G053350--Sobic008G007800 Sobic001G075200 Sobic001G075200 Sobic001G053350--Sobic001G075200 Sobic009G050800 Sobic009G050800 Sobic001G053350--Sobic009G050800 Sobic001G053350--Sobic010G036901 Sobic004G215200--Sobic001G053350 Sobic004G215200--Sobic010G062900 Sobic006G208200 Sobic006G208200 Sobic004G215200--Sobic006G208200 Sobic004G215200--Sobic001G485500 Sobic001G499500 Sobic001G499500 Sobic004G215200--Sobic001G499500 Sobic004G215200--Sobic009G163400 Sobic002G309100 Sobic002G309100 Sobic004G215200--Sobic002G309100 Sobic007G086600 Sobic007G086600 Sobic004G215200--Sobic007G086600 Sobic010G252100 Sobic010G252100 Sobic004G215200--Sobic010G252100 Sobic003G275400--Sobic009G168200 Sobic003G275400--Sobic009G163400 Sobic001G376501 Sobic001G376501 Sobic003G275400--Sobic001G376501 Sobic002G064800 Sobic002G064800 Sobic003G275400--Sobic002G064800 Sobic008G141900 Sobic008G141900 Sobic003G275400--Sobic008G141900 Sobic008G191700 Sobic008G191700 Sobic003G275400--Sobic008G191700 Sobic003G275400--Sobic008G121501 Sobic003G275400--Sobic001G485500 Sobic005G206100 Sobic005G206100 Sobic003G275400--Sobic005G206100 Sobic010G255400--Sobic008G007800 Sobic004G064800 Sobic004G064800 Sobic010G255400--Sobic004G064800 Sobic010G255400--Sobic005G201200 Sobic002G016000 Sobic002G016000 Sobic010G255400--Sobic002G016000 Sobic008G041300 Sobic008G041300 Sobic010G255400--Sobic008G041300 Sobic002G304500 Sobic002G304500 Sobic010G255400--Sobic002G304500 Sobic001G076600 Sobic001G076600 Sobic010G255400--Sobic001G076600 Sobic002G158300 Sobic002G158300 Sobic010G255400--Sobic002G158300 Sobic006G199500 Sobic006G199500 Sobic010G255400--Sobic006G199500 Sobic010G036901--Sobic004G064800 Sobic010G036901--Sobic010G255400 Sobic010G036901--Sobic002G304500 Sobic010G036901--Sobic001G053350 Sobic010G036901--Sobic001G485500 Sobic010G036901--Sobic008G007800 Sobic003G293400 Sobic003G293400 Sobic010G036901--Sobic003G293400 Sobic006G189000 Sobic006G189000 Sobic010G036901--Sobic006G189000 Sobic001G131900 Sobic001G131900 Sobic010G036901--Sobic001G131900 Sobic009G168200--Sobic003G275400 Sobic009G168200--Sobic008G141900 Sobic009G168200--Sobic009G163400 Sobic009G168200--Sobic001G376501 Sobic002G286632 Sobic002G286632 Sobic009G168200--Sobic002G286632 Sobic001G010500 Sobic001G010500 Sobic009G168200--Sobic001G010500 Sobic006G081700 Sobic006G081700 Sobic009G168200--Sobic006G081700 Sobic009G168200--Sobic002G064800 Sobic005G212201 Sobic005G212201 Sobic009G168200--Sobic005G212201 Sobic005G201200--Sobic002G016000 Sobic005G201200--Sobic008G007800 Sobic006G038700 Sobic006G038700 Sobic005G201200--Sobic006G038700 Sobic005G201200--Sobic004G064800 Sobic009G006700 Sobic009G006700 Sobic005G201200--Sobic009G006700 Sobic005G201200--Sobic010G255400 Sobic002G066700 Sobic002G066700 Sobic005G201200--Sobic002G066700 Sobic005G201200--Sobic002G304500 Sobic002G147400 Sobic002G147400 Sobic005G201200--Sobic002G147400 Sobic009G163400--Sobic001G376501 Sobic009G163400--Sobic008G141900 Sobic009G163400--Sobic001G010500 Sobic009G163400--Sobic008G121501 Sobic009G163400--Sobic002G309100 Sobic009G163400--Sobic002G064800 Sobic001G257650 Sobic001G257650 Sobic009G163400--Sobic001G257650 Sobic009G163400--Sobic003G275400 Sobic009G163400--Sobic009G168200 Sobic010G062900--Sobic002G309100 Sobic003G009000 Sobic003G009000 Sobic010G062900--Sobic003G009000 Sobic009G098700 Sobic009G098700 Sobic010G062900--Sobic009G098700 Sobic010G073900 Sobic010G073900 Sobic010G062900--Sobic010G073900 Sobic001G485700 Sobic001G485700 Sobic010G062900--Sobic001G485700 Sobic001G183666 Sobic001G183666 Sobic010G062900--Sobic001G183666 Sobic006G239500 Sobic006G239500 Sobic010G062900--Sobic006G239500 Sobic001G130600 Sobic001G130600 Sobic010G062900--Sobic001G130600 Sobic010G005100 Sobic010G005100 Sobic010G062900--Sobic010G005100
Octagon: transcription factors


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