Gene annotation
| Transcriptome id | Sobic.001G515300.1 |
|---|---|
| Synonym | AAE1, Sb01g048080 |
| Functional annotation | AMP-binding domain containing protein, expressed |
| UniProt | A0A1B6QQP6 |
| Pfam | PF13193 PF00501 |
| Panther DB | PTHR24095 PTHR24095:SF193 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0008152; metabolic process GO:0003824catalytic activity |
Orthologs (automatic annotation)
| TAIR | AT1G20560 : acyl activating enzyme 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g04130.1 : AMP-binding domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a000470 , Zm00025a000472 |
| Brachypodium | PNT78257 , KQK23791 |
| Barley | HORVU4Hr1G081350.3 , HORVU4Hr1G081350.2 , HORVU4Hr1G081350.5 , HORVU4Hr1G081350.7 , HORVU4Hr1G081350.6 , HORVU4Hr1G081420.1 , HORVU0Hr1G014980.2 , HORVU0Hr1G014980.3 , HORVU0Hr1G014980.1 , HORVU0Hr1G014980.6 , HORVU0Hr1G014980.4 , HORVU0Hr1G014980.5 , HORVU4Hr1G081290.4 , HORVU4Hr1G081290.5 , HORVU4Hr1G081290.1 , HORVU4Hr1G081290.2 , HORVU4Hr1G081290.3 |
| Wheat | TraesCS4D02G327100 , TraesCS4B02G330100 , TraesCS4B02G330200 , TraesCS5A02G501700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G235500 | homeodomain-related, putative, expressed | - |
| 2 | Sobic.002G071350 | - | - |
| 3 | Sobic.002G071350 | - | - |
| 4 | Sobic.002G071350 | - | - |
| 5 | Sobic.002G071350 | - | - |
| 6 | Sobic.010G126200 | - | - |
| 7 | Sobic.001G283900 | CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 8 | Sobic.002G428501 | - | - |
| 9 | Sobic.007G043100 | cycloartenol synthase, putative, expressed | - |
| 10 | Sobic.005G209200 | SCARECROW, putative, expressed | - |
| 11 | Sobic.002G190200 | ZOS9-05 - C2H2 zinc finger protein, expressed | - |
| 12 | Sobic.002G044700 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 13 | Sobic.004G235750 | - | - |
| 14 | Sobic.001G130800 | PB1 domain containing protein, expressed | - |
| 15 | Sobic.001G337701 | - | - |
| 16 | Sobic.006G008650 | - | - |
| 17 | Sobic.007G149700 | TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 18 | Sobic.004G235801 | - | K08272: CAB39, calcium binding protein 39 |
| 19 | Sobic.006G025600 | - | - |
| 20 | Sobic.008G157100 | "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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