Gene annotation
Transcriptome id Sobic.005G209200.1
Synonym Sb05g026270
Functional annotation SCARECROW, putative, expressed
UniProt A0A1Z5RJM9
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37650 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os11g47910.1 : SCARECROW, putative, expressed
MaizeGDB (Corn) Zm00025a015950 , Zm00025a029170 , Zm00025a029171
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G515300 AMP-binding domain containing protein, expressed -
2 Sobic.007G043100 cycloartenol synthase, putative, expressed -
3 Sobic.002G071350 - -
4 Sobic.002G071350 - -
5 Sobic.002G071350 - -
6 Sobic.002G071350 - -
7 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.010G126200 - -
9 Sobic.001G009000 expressed protein -
10 Sobic.002G059932 - -
11 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.002G044700 SAM dependent carboxyl methyltransferase, putative, expressed -
13 Sobic.005G103200 - -
14 Sobic.002G428501 - -
15 Sobic.003G216300 pleiotropic drug resistance protein, putative, expressed -
16 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.006G276100 protein kinase family protein, putative, expressed -
18 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
19 Sobic.005G156400 phytosulfokine receptor precursor, putative, expressed -
20 Sobic.005G210200 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic005G209200 Sobic005G209200 Sobic001G515300 Sobic001G515300 Sobic005G209200--Sobic001G515300 Sobic007G043100 Sobic007G043100 Sobic005G209200--Sobic007G043100 Sobic002G071350 Sobic002G071350 Sobic005G209200--Sobic002G071350 Sobic002G077400 Sobic002G077400 Sobic005G209200--Sobic002G077400 Sobic010G126200 Sobic010G126200 Sobic005G209200--Sobic010G126200 Sobic001G009000 Sobic001G009000 Sobic005G209200--Sobic001G009000 Sobic009G235500 Sobic009G235500 Sobic001G515300--Sobic009G235500 Sobic001G515300--Sobic002G071350 Sobic001G515300--Sobic010G126200 Sobic001G283900 Sobic001G283900 Sobic001G515300--Sobic001G283900 Sobic002G428501 Sobic002G428501 Sobic001G515300--Sobic002G428501 Sobic001G515300--Sobic007G043100 Sobic007G043100--Sobic002G071350 Sobic007G043100--Sobic010G126200 Sobic007G043100--Sobic002G428501 Sobic002G190200 Sobic002G190200 Sobic007G043100--Sobic002G190200 Sobic007G043100--Sobic001G283900 Sobic002G044700 Sobic002G044700 Sobic007G043100--Sobic002G044700 Sobic002G071350--Sobic002G071350 Sobic002G071350--Sobic010G126200 Sobic002G071350--Sobic002G428501 Sobic002G071350--Sobic007G043100 Sobic002G071350--Sobic002G190200 Sobic002G071350--Sobic001G283900 Sobic001G130800 Sobic001G130800 Sobic002G071350--Sobic001G130800 Sobic006G177900 Sobic006G177900 Sobic002G077400--Sobic006G177900 Sobic002G077400--Sobic001G009000 Sobic003G190100 Sobic003G190100 Sobic002G077400--Sobic003G190100 Sobic005G093800 Sobic005G093800 Sobic002G077400--Sobic005G093800 Sobic007G149700 Sobic007G149700 Sobic002G077400--Sobic007G149700 Sobic010G271901 Sobic010G271901 Sobic002G077400--Sobic010G271901 Sobic002G173100 Sobic002G173100 Sobic002G077400--Sobic002G173100 Sobic001G250000 Sobic001G250000 Sobic002G077400--Sobic001G250000 Sobic010G178401 Sobic010G178401 Sobic002G077400--Sobic010G178401 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic010G126200--Sobic007G043100 Sobic010G126200--Sobic002G428501 Sobic010G126200--Sobic002G190200 Sobic006G025600 Sobic006G025600 Sobic010G126200--Sobic006G025600 Sobic001G009000--Sobic002G077400 Sobic007G133000 Sobic007G133000 Sobic001G009000--Sobic007G133000 Sobic001G009000--Sobic003G190100 Sobic001G009000--Sobic007G149700 Sobic002G244200 Sobic002G244200 Sobic001G009000--Sobic002G244200 Sobic009G248801 Sobic009G248801 Sobic001G009000--Sobic009G248801 Sobic007G202300 Sobic007G202300 Sobic001G009000--Sobic007G202300 Sobic008G157100 Sobic008G157100 Sobic001G009000--Sobic008G157100 Sobic004G086150 Sobic004G086150 Sobic001G009000--Sobic004G086150
Octagon: transcription factors


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