Gene annotation
Transcriptome id Sobic.003G216300.3,Sobic.003G216300.1,Sobic.003G216300.2
Synonym ATABCG40, Sb03g027520, ABCG40, PDR12, ATPDR12
Functional annotation pleiotropic drug resistance protein, putative, expressed
UniProt A0A1W0VYE5 , A0A1W0VYE8 , C5XQX9
Pfam PF08370 PF01061 PF00005 PF01061 PF00005 PF08370
Panther DB PTHR19241:SF264 PTHR19241 PTHR19241 PTHR19241:SF264
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0005524ATP binding GO:0016887ATPase activity GO:0016020membrane GO:0016887ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G15520 : pleiotropic drug resistance 12
RAP-DB (Rice) LOC_Os01g42410.1 : pleiotropic drug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a038481 , Zm00025a028685 , Zm00025a038480 , Zm00025a034596
Brachypodium KQK03837 , KQK08670
Barley HORVU3Hr1G071470.8 , HORVU3Hr1G071470.9 , HORVU3Hr1G071470.4 , HORVU3Hr1G071470.5 , HORVU3Hr1G071470.6 , HORVU3Hr1G071470.7 , HORVU3Hr1G071470.1 , HORVU3Hr1G071470.2 , HORVU3Hr1G071470.3 , HORVU3Hr1G053380.8 , HORVU3Hr1G053380.2 , HORVU3Hr1G053380.3 , HORVU3Hr1G053380.1 , HORVU3Hr1G053380.6 , HORVU3Hr1G053380.7 , HORVU3Hr1G053380.4 , HORVU3Hr1G053380.5 , HORVU3Hr1G053380.10 , HORVU3Hr1G053380.11 , HORVU3Hr1G053380.12 , HORVU3Hr1G053380.13 , HORVU3Hr1G053380.14 , HORVU3Hr1G053380.15 , HORVU3Hr1G053380.16 , HORVU3Hr1G071470.12 , HORVU3Hr1G071470.13 , HORVU3Hr1G071470.10 , HORVU3Hr1G071470.11
Wheat TraesCS3D02G272200 , TraesCS3D02G272200 , TraesCS3A02G218000 , TraesCS3A02G218000 , TraesCS3A02G218000 , TraesCS3B02G248500 , TraesCS2A02G483300 , TraesCS3D02G234300 , TraesCS3D02G234300 , TraesCS3D02G234300 , TraesCS3A02G272800 , TraesCS3A02G272800 , TraesCS3B02G306400 , TraesCS3B02G306400 , TraesCS3B02G306400
Populus PNS93191 , PNS93190 , PNS93192 , PNS92444 , PNT33613 , PNS92443


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G126400 - K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
2 Sobic.005G138600 - -
3 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
4 Sobic.002G331800 PPR repeat containing protein, expressed -
5 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
6 Sobic.006G025600 - -
7 Sobic.010G126200 - -
8 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.008G157100 "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
10 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
12 Sobic.007G185300 - -
13 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
14 Sobic.006G177900 - -
15 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.008G055300 UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed K07441: beta-1,4-N-acetylglucosaminyltransferase
17 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase
18 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
19 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
20 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -


Gene co-expression network
sample Sobic003G216300 Sobic003G216300 Sobic001G126400 Sobic001G126400 Sobic003G216300--Sobic001G126400 Sobic005G138600 Sobic005G138600 Sobic003G216300--Sobic005G138600 Sobic003G125900 Sobic003G125900 Sobic003G216300--Sobic003G125900 Sobic002G331800 Sobic002G331800 Sobic003G216300--Sobic002G331800 Sobic010G197000 Sobic010G197000 Sobic003G216300--Sobic010G197000 Sobic006G025600 Sobic006G025600 Sobic003G216300--Sobic006G025600 Sobic010G126200 Sobic010G126200 Sobic003G216300--Sobic010G126200 Sobic003G190000 Sobic003G190000 Sobic003G216300--Sobic003G190000 Sobic008G157100 Sobic008G157100 Sobic003G216300--Sobic008G157100 Sobic007G149700 Sobic007G149700 Sobic001G126400--Sobic007G149700 Sobic004G089200 Sobic004G089200 Sobic001G126400--Sobic004G089200 Sobic002G173100 Sobic002G173100 Sobic001G126400--Sobic002G173100 Sobic001G126400--Sobic008G157100 Sobic002G354600 Sobic002G354600 Sobic001G126400--Sobic002G354600 Sobic001G126400--Sobic006G025600 Sobic001G250000 Sobic001G250000 Sobic001G126400--Sobic001G250000 Sobic002G044700 Sobic002G044700 Sobic001G126400--Sobic002G044700 Sobic002G077400 Sobic002G077400 Sobic001G126400--Sobic002G077400 Sobic005G138600--Sobic010G197000 Sobic005G138600--Sobic002G331800 Sobic005G138600--Sobic002G354600 Sobic003G439600 Sobic003G439600 Sobic005G138600--Sobic003G439600 Sobic010G211500 Sobic010G211500 Sobic005G138600--Sobic010G211500 Sobic009G052700 Sobic009G052700 Sobic005G138600--Sobic009G052700 Sobic006G214700 Sobic006G214700 Sobic005G138600--Sobic006G214700 Sobic003G245800 Sobic003G245800 Sobic005G138600--Sobic003G245800 Sobic001G071200 Sobic001G071200 Sobic005G138600--Sobic001G071200 Sobic003G125900--Sobic002G331800 Sobic004G179400 Sobic004G179400 Sobic003G125900--Sobic004G179400 Sobic003G070900 Sobic003G070900 Sobic003G125900--Sobic003G070900 Sobic003G094350 Sobic003G094350 Sobic003G125900--Sobic003G094350 Sobic001G060500 Sobic001G060500 Sobic003G125900--Sobic001G060500 Sobic001G118400 Sobic001G118400 Sobic003G125900--Sobic001G118400 Sobic004G252500 Sobic004G252500 Sobic003G125900--Sobic004G252500 Sobic002G028400 Sobic002G028400 Sobic003G125900--Sobic002G028400 Sobic001G500600 Sobic001G500600 Sobic003G125900--Sobic001G500600 Sobic010G076800 Sobic010G076800 Sobic002G331800--Sobic010G076800 Sobic002G331800--Sobic006G214700 Sobic002G331800--Sobic003G439600 Sobic004G333400 Sobic004G333400 Sobic002G331800--Sobic004G333400 Sobic010G183400 Sobic010G183400 Sobic002G331800--Sobic010G183400 Sobic002G331800--Sobic001G118400 Sobic001G450600 Sobic001G450600 Sobic002G331800--Sobic001G450600 Sobic002G331800--Sobic003G125900 Sobic002G331800--Sobic003G245800 Sobic009G014100 Sobic009G014100 Sobic010G197000--Sobic009G014100 Sobic010G197000--Sobic002G354600 Sobic010G197000--Sobic005G138600 Sobic004G300000 Sobic004G300000 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic010G197000--Sobic003G190000 Sobic010G197000--Sobic002G331800 Sobic010G197000--Sobic006G214700 Sobic008G172300 Sobic008G172300 Sobic010G197000--Sobic008G172300 Sobic006G025600--Sobic002G044700 Sobic006G025600--Sobic004G089200 Sobic006G276100 Sobic006G276100 Sobic006G025600--Sobic006G276100 Sobic006G025600--Sobic001G250000 Sobic006G025500 Sobic006G025500 Sobic006G025600--Sobic006G025500 Sobic006G177900 Sobic006G177900 Sobic006G025600--Sobic006G177900 Sobic006G025600--Sobic004G252500 Sobic006G025600--Sobic010G126200 Sobic006G025600--Sobic007G149700 Sobic002G071350 Sobic002G071350 Sobic010G126200--Sobic002G071350 Sobic010G126200--Sobic002G044700 Sobic007G043100 Sobic007G043100 Sobic010G126200--Sobic007G043100 Sobic002G428501 Sobic002G428501 Sobic010G126200--Sobic002G428501 Sobic002G190200 Sobic002G190200 Sobic010G126200--Sobic002G190200 Sobic010G126200--Sobic006G025600 Sobic003G190000--Sobic001G060500 Sobic002G073200 Sobic002G073200 Sobic003G190000--Sobic002G073200 Sobic003G190000--Sobic002G173100 Sobic003G190000--Sobic010G197000 Sobic003G203300 Sobic003G203300 Sobic003G190000--Sobic003G203300 Sobic003G190000--Sobic009G014100 Sobic005G075100 Sobic005G075100 Sobic003G190000--Sobic005G075100 Sobic005G142800 Sobic005G142800 Sobic003G190000--Sobic005G142800 Sobic001G219700 Sobic001G219700 Sobic003G190000--Sobic001G219700 Sobic008G157100--Sobic004G089200 Sobic008G157100--Sobic007G149700 Sobic008G157100--Sobic002G354600 Sobic008G157100--Sobic006G025600 Sobic003G190100 Sobic003G190100 Sobic008G157100--Sobic003G190100 Sobic003G108900 Sobic003G108900 Sobic008G157100--Sobic003G108900 Sobic008G157100--Sobic002G044700 Sobic008G157100--Sobic002G173100 Sobic004G165900 Sobic004G165900 Sobic008G157100--Sobic004G165900
Octagon: transcription factors


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