Gene annotation
Transcriptome id Sobic.001G542600.1
Synonym Sb01g050490
Functional annotation naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed
UniProt C5WMV9
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF168
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G17010 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os01g24980.1 : naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a053605
Brachypodium -
Barley HORVU4Hr1G088340.8 , HORVU4Hr1G088340.4 , HORVU4Hr1G088340.28 , HORVU4Hr1G088340.29 , HORVU4Hr1G088340.20 , HORVU4Hr1G088340.22 , HORVU4Hr1G088340.23 , HORVU4Hr1G088340.24 , HORVU4Hr1G088340.25 , HORVU4Hr1G088340.26 , HORVU4Hr1G088340.27 , HORVU4Hr1G088340.15 , HORVU4Hr1G088340.14 , HORVU4Hr1G088340.10 , HORVU4Hr1G088340.13 , HORVU4Hr1G088340.12 , HORVU4Hr1G088340.18 , HORVU4Hr1G088340.17 , HORVU4Hr1G088340.16 , HORVU4Hr1G088340.11 , HORVU4Hr1G088340.43 , HORVU4Hr1G088340.38 , HORVU4Hr1G088340.33 , HORVU4Hr1G088340.32 , HORVU4Hr1G088340.31 , HORVU4Hr1G088340.30 , HORVU4Hr1G088340.37 , HORVU4Hr1G088340.39
Wheat TraesCS4B02G374100 , TraesCS4B02G374100
Populus -


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cDNA sequences
Sobic.001G542600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G321700 dehydration response related protein, putative, expressed -
2 Sobic.004G242900 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.002G257150 - -
4 Sobic.001G494200 PPR repeat containing protein, expressed -
5 Sobic.010G065001 - -
6 Sobic.001G144001 - -
7 Sobic.001G213832 - -
8 Sobic.005G068200 expressed protein -
9 Sobic.006G073300 RNA recognition motif containing protein, putative, expressed -
10 Sobic.004G242800 - -
11 Sobic.010G278900 expressed protein -
12 Sobic.009G102250 - -
13 Sobic.003G064901 - -
14 Sobic.004G106200 receptor-like kinase, putative, expressed -
15 Sobic.001G167000 HEAT repeat family protein, putative, expressed K11492: NCAPG2, condensin-2 complex subunit G2
16 Sobic.007G137501 - -
17 Sobic.005G030266 - -
18 Sobic.010G196466 - -
19 Sobic.004G206600 osFTL5 FT-Like5 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
20 Sobic.001G329001 - K03129: transcription initiation factor TFIID subunit 4


Gene co-expression network
sample Sobic001G542600 Sobic001G542600 Sobic001G321700 Sobic001G321700 Sobic001G542600--Sobic001G321700 Sobic004G242900 Sobic004G242900 Sobic001G542600--Sobic004G242900 Sobic002G257150 Sobic002G257150 Sobic001G542600--Sobic002G257150 Sobic001G494200 Sobic001G494200 Sobic001G542600--Sobic001G494200 Sobic010G065001 Sobic010G065001 Sobic001G542600--Sobic010G065001 Sobic001G144001 Sobic001G144001 Sobic001G542600--Sobic001G144001 Sobic001G213832 Sobic001G213832 Sobic001G542600--Sobic001G213832 Sobic005G068200 Sobic005G068200 Sobic001G542600--Sobic005G068200 Sobic006G073300 Sobic006G073300 Sobic001G542600--Sobic006G073300 Sobic004G106200 Sobic004G106200 Sobic001G321700--Sobic004G106200 Sobic009G111800 Sobic009G111800 Sobic001G321700--Sobic009G111800 Sobic001G476100 Sobic001G476100 Sobic001G321700--Sobic001G476100 Sobic001G321700--Sobic010G065001 Sobic004G109100 Sobic004G109100 Sobic001G321700--Sobic004G109100 Sobic001G319000 Sobic001G319000 Sobic001G321700--Sobic001G319000 Sobic008G081500 Sobic008G081500 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic001G321700--Sobic004G242900 Sobic004G242900--Sobic001G144001 Sobic006G131700 Sobic006G131700 Sobic004G242900--Sobic006G131700 Sobic003G139050 Sobic003G139050 Sobic004G242900--Sobic003G139050 Sobic003G113100 Sobic003G113100 Sobic004G242900--Sobic003G113100 Sobic003G218950 Sobic003G218950 Sobic004G242900--Sobic003G218950 Sobic009G192200 Sobic009G192200 Sobic004G242900--Sobic009G192200 Sobic005G028500 Sobic005G028500 Sobic004G242900--Sobic005G028500 Sobic001G129200 Sobic001G129200 Sobic004G242900--Sobic001G129200 Sobic009G101500 Sobic009G101500 Sobic004G242900--Sobic009G101500 Sobic001G329001 Sobic001G329001 Sobic002G257150--Sobic001G329001 Sobic005G132100 Sobic005G132100 Sobic002G257150--Sobic005G132100 Sobic003G410000 Sobic003G410000 Sobic002G257150--Sobic003G410000 Sobic004G248200 Sobic004G248200 Sobic002G257150--Sobic004G248200 Sobic004G058400 Sobic004G058400 Sobic002G257150--Sobic004G058400 Sobic004G242800 Sobic004G242800 Sobic002G257150--Sobic004G242800 Sobic002G076300 Sobic002G076300 Sobic002G257150--Sobic002G076300 Sobic004G206600 Sobic004G206600 Sobic002G257150--Sobic004G206600 Sobic002G086700 Sobic002G086700 Sobic002G257150--Sobic002G086700 Sobic007G137501 Sobic007G137501 Sobic001G494200--Sobic007G137501 Sobic008G108300 Sobic008G108300 Sobic001G494200--Sobic008G108300 Sobic003G393600 Sobic003G393600 Sobic001G494200--Sobic003G393600 Sobic001G075500 Sobic001G075500 Sobic001G494200--Sobic001G075500 Sobic001G245650 Sobic001G245650 Sobic001G494200--Sobic001G245650 Sobic003G064901 Sobic003G064901 Sobic001G494200--Sobic003G064901 Sobic010G254000 Sobic010G254000 Sobic001G494200--Sobic010G254000 Sobic005G002050 Sobic005G002050 Sobic001G494200--Sobic005G002050 Sobic001G487900 Sobic001G487900 Sobic001G494200--Sobic001G487900 Sobic005G096450 Sobic005G096450 Sobic010G065001--Sobic005G096450 Sobic010G065001--Sobic007G137501 Sobic004G091900 Sobic004G091900 Sobic010G065001--Sobic004G091900 Sobic010G065001--Sobic003G064901 Sobic001G011600 Sobic001G011600 Sobic010G065001--Sobic001G011600 Sobic007G149200 Sobic007G149200 Sobic010G065001--Sobic007G149200 Sobic005G116400 Sobic005G116400 Sobic010G065001--Sobic005G116400 Sobic003G369533 Sobic003G369533 Sobic010G065001--Sobic003G369533 Sobic003G169100 Sobic003G169100 Sobic010G065001--Sobic003G169100 Sobic009G236900 Sobic009G236900 Sobic001G144001--Sobic009G236900 Sobic001G144001--Sobic006G131700 Sobic001G144001--Sobic003G139050 Sobic001G144001--Sobic003G113100 Sobic004G282933 Sobic004G282933 Sobic001G144001--Sobic004G282933 Sobic001G144001--Sobic004G242900 Sobic001G144001--Sobic009G192200 Sobic003G330350 Sobic003G330350 Sobic001G144001--Sobic003G330350 Sobic001G054050 Sobic001G054050 Sobic001G144001--Sobic001G054050 Sobic009G136950 Sobic009G136950 Sobic001G213832--Sobic009G136950 Sobic010G054700 Sobic010G054700 Sobic001G213832--Sobic010G054700 Sobic009G102250 Sobic009G102250 Sobic001G213832--Sobic009G102250 Sobic002G012100 Sobic002G012100 Sobic001G213832--Sobic002G012100 Sobic004G111200 Sobic004G111200 Sobic001G213832--Sobic004G111200 Sobic003G023450 Sobic003G023450 Sobic001G213832--Sobic003G023450 Sobic001G213832--Sobic001G494200 Sobic010G196466 Sobic010G196466 Sobic001G213832--Sobic010G196466 Sobic001G213832--Sobic004G242800 Sobic005G030266 Sobic005G030266 Sobic005G068200--Sobic005G030266 Sobic001G249900 Sobic001G249900 Sobic005G068200--Sobic001G249900 Sobic006G147350 Sobic006G147350 Sobic005G068200--Sobic006G147350 Sobic006G130100 Sobic006G130100 Sobic005G068200--Sobic006G130100 Sobic006G093550 Sobic006G093550 Sobic005G068200--Sobic006G093550 Sobic003G380800 Sobic003G380800 Sobic005G068200--Sobic003G380800 Sobic010G133225 Sobic010G133225 Sobic005G068200--Sobic010G133225 Sobic005G166900 Sobic005G166900 Sobic005G068200--Sobic005G166900 Sobic005G068200--Sobic003G393600 Sobic006G073300--Sobic005G132100 Sobic006G073300--Sobic002G257150 Sobic008G007500 Sobic008G007500 Sobic006G073300--Sobic008G007500 Sobic006G073300--Sobic004G242800 Sobic005G187800 Sobic005G187800 Sobic006G073300--Sobic005G187800 Sobic006G073300--Sobic003G064901 Sobic006G073300--Sobic002G076300 Sobic006G073300--Sobic001G144001 Sobic006G073300--Sobic001G329001
Octagon: transcription factors


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