Gene annotation
Transcriptome id Sobic.001G167000.1
Synonym Sb01g014610
Functional annotation HEAT repeat family protein, putative, expressed
UniProt C5WSB2
Pfam PF12422
Panther DB PTHR16199 PTHR16199:SF4
NCBI CDD KOG1949; Uncharacterized conserved protein
KEGG Orthology K11492; NCAPG2, condensin-2 complex subunit G2
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT1G64960 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os03g42040.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006827 , Zm00025a022249 , Zm00025a030224 , Zm00025a007406 , Zm00025a018273 , Zm00025a001284 , Zm00025a016680
Brachypodium KQK14181
Barley HORVU4Hr1G013650.3 , HORVU4Hr1G013650.2 , HORVU4Hr1G013650.1 , HORVU4Hr1G013650.6 , HORVU4Hr1G013650.5 , HORVU4Hr1G013650.4
Wheat TraesCS1D02G067000 , TraesCS1D02G067000 , TraesCS1B02G084200 , TraesCS4B02G080400 , TraesCS4B02G080400 , TraesCS4D02G079300 , TraesCS1A02G066000 , TraesCS1A02G066000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G012100 cytokinin inducible protein, putative, expressed -
2 Sobic.004G242800 - -
3 Sobic.001G270800 ras-related protein, putative, expressed K07933: Rab-like protein 3
4 Sobic.001G182800 disease resistance RPP13-like protein 1, putative, expressed -
5 Sobic.003G330350 - -
6 Sobic.004G299850 - -
7 Sobic.003G064901 - -
8 Sobic.010G196466 - -
9 Sobic.009G102250 - -
10 Sobic.004G206600 osFTL5 FT-Like5 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
11 Sobic.001G182700 disease resistance RPP13-like protein 1, putative, expressed -
12 Sobic.001G011600 glutathione S-transferase, putative, expressed -
13 Sobic.003G218950 - -
14 Sobic.006G131700 CRS1/YhbY domain containing protein, putative, expressed -
15 Sobic.008G108300 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
16 Sobic.009G101500 - -
17 Sobic.007G141900 resistance protein SlVe1 precursor, putative, expressed -
18 Sobic.004G091900 - -
19 Sobic.003G369533 - -
20 Sobic.007G137501 - -


Gene co-expression network
sample Sobic001G167000 Sobic001G167000 Sobic002G012100 Sobic002G012100 Sobic001G167000--Sobic002G012100 Sobic004G242800 Sobic004G242800 Sobic001G167000--Sobic004G242800 Sobic001G270800 Sobic001G270800 Sobic001G167000--Sobic001G270800 Sobic001G182800 Sobic001G182800 Sobic001G167000--Sobic001G182800 Sobic003G330350 Sobic003G330350 Sobic001G167000--Sobic003G330350 Sobic004G299850 Sobic004G299850 Sobic001G167000--Sobic004G299850 Sobic003G064901 Sobic003G064901 Sobic001G167000--Sobic003G064901 Sobic010G196466 Sobic010G196466 Sobic001G167000--Sobic010G196466 Sobic009G102250 Sobic009G102250 Sobic001G167000--Sobic009G102250 Sobic007G141900 Sobic007G141900 Sobic002G012100--Sobic007G141900 Sobic002G012100--Sobic001G167000 Sobic008G072800 Sobic008G072800 Sobic002G012100--Sobic008G072800 Sobic004G206600 Sobic004G206600 Sobic002G012100--Sobic004G206600 Sobic008G067000 Sobic008G067000 Sobic002G012100--Sobic008G067000 Sobic002G012100--Sobic004G242800 Sobic002G012100--Sobic010G196466 Sobic009G064300 Sobic009G064300 Sobic002G012100--Sobic009G064300 Sobic003G023450 Sobic003G023450 Sobic002G012100--Sobic003G023450 Sobic004G242800--Sobic001G167000 Sobic004G242800--Sobic002G012100 Sobic004G242800--Sobic004G206600 Sobic004G242800--Sobic010G196466 Sobic009G175800 Sobic009G175800 Sobic004G242800--Sobic009G175800 Sobic004G242800--Sobic001G270800 Sobic004G242800--Sobic003G330350 Sobic004G242800--Sobic009G102250 Sobic009G087540 Sobic009G087540 Sobic004G242800--Sobic009G087540 Sobic001G270800--Sobic003G330350 Sobic009G175700 Sobic009G175700 Sobic001G270800--Sobic009G175700 Sobic001G270800--Sobic001G167000 Sobic004G091900 Sobic004G091900 Sobic001G270800--Sobic004G091900 Sobic006G131700 Sobic006G131700 Sobic001G270800--Sobic006G131700 Sobic001G270800--Sobic003G064901 Sobic003G169000 Sobic003G169000 Sobic001G270800--Sobic003G169000 Sobic003G233266 Sobic003G233266 Sobic001G270800--Sobic003G233266 Sobic009G101500 Sobic009G101500 Sobic001G270800--Sobic009G101500 Sobic001G182700 Sobic001G182700 Sobic001G182800--Sobic001G182700 Sobic003G369533 Sobic003G369533 Sobic001G182800--Sobic003G369533 Sobic001G182900 Sobic001G182900 Sobic001G182800--Sobic001G182900 Sobic002G165200 Sobic002G165200 Sobic001G182800--Sobic002G165200 Sobic003G218950 Sobic003G218950 Sobic001G182800--Sobic003G218950 Sobic010G185250 Sobic010G185250 Sobic001G182800--Sobic010G185250 Sobic003G369566 Sobic003G369566 Sobic001G182800--Sobic003G369566 Sobic002G159750 Sobic002G159750 Sobic001G182800--Sobic002G159750 Sobic007G065000 Sobic007G065000 Sobic001G182800--Sobic007G065000 Sobic003G330350--Sobic001G270800 Sobic003G050100 Sobic003G050100 Sobic003G330350--Sobic003G050100 Sobic003G330350--Sobic006G131700 Sobic003G330350--Sobic003G218950 Sobic001G098700 Sobic001G098700 Sobic003G330350--Sobic001G098700 Sobic003G330350--Sobic004G091900 Sobic006G057100 Sobic006G057100 Sobic003G330350--Sobic006G057100 Sobic009G192200 Sobic009G192200 Sobic003G330350--Sobic009G192200 Sobic003G330350--Sobic001G167000 Sobic009G029100 Sobic009G029100 Sobic004G299850--Sobic009G029100 Sobic004G299850--Sobic001G167000 Sobic003G412500 Sobic003G412500 Sobic004G299850--Sobic003G412500 Sobic001G011600 Sobic001G011600 Sobic004G299850--Sobic001G011600 Sobic004G299850--Sobic003G330350 Sobic006G258600 Sobic006G258600 Sobic004G299850--Sobic006G258600 Sobic004G299850--Sobic002G012100 Sobic006G130100 Sobic006G130100 Sobic004G299850--Sobic006G130100 Sobic004G299850--Sobic006G131700 Sobic003G064901--Sobic009G102250 Sobic002G138400 Sobic002G138400 Sobic003G064901--Sobic002G138400 Sobic003G064901--Sobic004G091900 Sobic003G064901--Sobic001G270800 Sobic003G064901--Sobic001G167000 Sobic003G064901--Sobic001G182700 Sobic004G032200 Sobic004G032200 Sobic003G064901--Sobic004G032200 Sobic007G137501 Sobic007G137501 Sobic003G064901--Sobic007G137501 Sobic003G064901--Sobic001G182800 Sobic010G196466--Sobic004G206600 Sobic010G196466--Sobic007G141900 Sobic010G196466--Sobic002G012100 Sobic010G196466--Sobic001G167000 Sobic002G324801 Sobic002G324801 Sobic010G196466--Sobic002G324801 Sobic003G267200 Sobic003G267200 Sobic010G196466--Sobic003G267200 Sobic002G009000 Sobic002G009000 Sobic010G196466--Sobic002G009000 Sobic010G196466--Sobic004G242800 Sobic010G196466--Sobic008G072800 Sobic009G102250--Sobic003G064901 Sobic009G102250--Sobic002G138400 Sobic009G102250--Sobic004G032200 Sobic009G102250--Sobic001G167000 Sobic004G111200 Sobic004G111200 Sobic009G102250--Sobic004G111200 Sobic009G102250--Sobic001G182700 Sobic009G102250--Sobic010G196466 Sobic009G102250--Sobic001G270800 Sobic009G102250--Sobic001G182800
Octagon: transcription factors


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