Gene annotation
Transcriptome id Sobic.008G108300.1
Synonym Sb08g016300
Functional annotation peroxisomal membrane protein, putative, expressed
UniProt C5YP18
Pfam PF04117
Panther DB PTHR11266 PTHR11266:SF18
NCBI CDD KOG1944; Peroxisomal membrane protein MPV17 and related proteins
KEGG Orthology K13348; protein Mpv17
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G33905 : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
RAP-DB (Rice) LOC_Os12g32330.1 : peroxisomal membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a040661
Brachypodium KQJ86607
Barley HORVU0Hr1G011860.2 , HORVU0Hr1G011860.3 , HORVU0Hr1G011860.8 , HORVU0Hr1G011860.6 , HORVU0Hr1G011860.4 , HORVU0Hr1G011860.5 , HORVU0Hr1G011860.1
Wheat TraesCS5D02G115600 , TraesCS5B02G108000
Populus -


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cDNA sequences
Sobic.008G108300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G165200 - -
2 Sobic.001G182800 disease resistance RPP13-like protein 1, putative, expressed -
3 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
4 Sobic.003G393600 B3 DNA binding domain containing protein, expressed -
5 Sobic.010G185250 - -
6 Sobic.010G254000 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
7 Sobic.003G218950 - -
8 Sobic.003G369533 - -
9 Sobic.001G182700 disease resistance RPP13-like protein 1, putative, expressed -
10 Sobic.004G337600 - -
11 Sobic.009G148950 - -
12 Sobic.009G029100 serine/threonine-protein kinase receptor precursor, putative, expressed -
13 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18
14 Sobic.003G171900 - -
15 Sobic.001G182900 - -
16 Sobic.004G087050 - -
17 Sobic.002G270733 - -
18 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
19 Sobic.003G169300 chloroplast 30S ribosomal protein S2, putative, expressed K02967: RP-S2, MRPS2, small subunit ribosomal protein S2
20 Sobic.005G110493 - -


Gene co-expression network
sample Sobic008G108300 Sobic008G108300 Sobic002G165200 Sobic002G165200 Sobic008G108300--Sobic002G165200 Sobic001G182800 Sobic001G182800 Sobic008G108300--Sobic001G182800 Sobic006G192600 Sobic006G192600 Sobic008G108300--Sobic006G192600 Sobic003G393600 Sobic003G393600 Sobic008G108300--Sobic003G393600 Sobic010G185250 Sobic010G185250 Sobic008G108300--Sobic010G185250 Sobic010G254000 Sobic010G254000 Sobic008G108300--Sobic010G254000 Sobic003G218950 Sobic003G218950 Sobic008G108300--Sobic003G218950 Sobic003G369533 Sobic003G369533 Sobic008G108300--Sobic003G369533 Sobic001G182700 Sobic001G182700 Sobic008G108300--Sobic001G182700 Sobic002G165200--Sobic010G185250 Sobic001G182900 Sobic001G182900 Sobic002G165200--Sobic001G182900 Sobic002G165200--Sobic003G218950 SobicK029400 SobicK029400 Sobic002G165200--SobicK029400 Sobic002G165200--Sobic003G369533 Sobic010G035600 Sobic010G035600 Sobic002G165200--Sobic010G035600 Sobic002G165200--Sobic006G192600 Sobic003G412500 Sobic003G412500 Sobic002G165200--Sobic003G412500 Sobic003G172500 Sobic003G172500 Sobic002G165200--Sobic003G172500 Sobic001G182800--Sobic001G182700 Sobic001G182800--Sobic003G369533 Sobic001G182800--Sobic001G182900 Sobic001G182800--Sobic002G165200 Sobic001G182800--Sobic003G218950 Sobic001G182800--Sobic010G185250 Sobic003G369566 Sobic003G369566 Sobic001G182800--Sobic003G369566 Sobic002G159750 Sobic002G159750 Sobic001G182800--Sobic002G159750 Sobic007G065000 Sobic007G065000 Sobic001G182800--Sobic007G065000 Sobic004G337600 Sobic004G337600 Sobic006G192600--Sobic004G337600 Sobic003G168500 Sobic003G168500 Sobic006G192600--Sobic003G168500 Sobic003G172850 Sobic003G172850 Sobic006G192600--Sobic003G172850 Sobic003G168800 Sobic003G168800 Sobic006G192600--Sobic003G168800 Sobic002G044500 Sobic002G044500 Sobic006G192600--Sobic002G044500 Sobic004G251400 Sobic004G251400 Sobic006G192600--Sobic004G251400 Sobic003G172400 Sobic003G172400 Sobic006G192600--Sobic003G172400 Sobic006G192600--Sobic002G165200 Sobic008G160300 Sobic008G160300 Sobic006G192600--Sobic008G160300 Sobic003G393600--Sobic010G254000 Sobic003G393600--Sobic008G108300 Sobic003G290050 Sobic003G290050 Sobic003G393600--Sobic003G290050 Sobic003G393600--Sobic002G044500 Sobic002G149966 Sobic002G149966 Sobic003G393600--Sobic002G149966 Sobic001G266000 Sobic001G266000 Sobic003G393600--Sobic001G266000 Sobic003G393600--Sobic003G168500 Sobic002G222000 Sobic002G222000 Sobic003G393600--Sobic002G222000 Sobic003G172900 Sobic003G172900 Sobic003G393600--Sobic003G172900 Sobic010G185250--Sobic002G165200 Sobic010G185250--Sobic001G182900 Sobic010G185250--Sobic010G035600 Sobic010G185250--SobicK029400 Sobic010G185250--Sobic003G369533 Sobic006G057100 Sobic006G057100 Sobic010G185250--Sobic006G057100 Sobic010G185250--Sobic003G218950 Sobic010G185250--Sobic003G168800 Sobic010G185250--Sobic003G172500 Sobic010G254000--Sobic002G222000 Sobic002G148166 Sobic002G148166 Sobic010G254000--Sobic002G148166 Sobic005G002050 Sobic005G002050 Sobic010G254000--Sobic005G002050 Sobic010G254000--Sobic003G172900 Sobic003G169300 Sobic003G169300 Sobic010G254000--Sobic003G169300 Sobic005G110493 Sobic005G110493 Sobic010G254000--Sobic005G110493 Sobic003G173266 Sobic003G173266 Sobic010G254000--Sobic003G173266 Sobic003G130200 Sobic003G130200 Sobic010G254000--Sobic003G130200 Sobic010G254000--Sobic004G251400 Sobic003G218950--Sobic006G057100 Sobic003G218950--Sobic003G369533 Sobic003G352000 Sobic003G352000 Sobic003G218950--Sobic003G352000 Sobic003G218950--SobicK029400 Sobic006G131700 Sobic006G131700 Sobic003G218950--Sobic006G131700 Sobic003G218950--Sobic002G165200 Sobic007G085900 Sobic007G085900 Sobic003G218950--Sobic007G085900 Sobic003G113100 Sobic003G113100 Sobic003G218950--Sobic003G113100 Sobic003G169000 Sobic003G169000 Sobic003G218950--Sobic003G169000 Sobic003G369533--SobicK029400 Sobic003G369533--Sobic003G218950 Sobic003G168200 Sobic003G168200 Sobic003G369533--Sobic003G168200 Sobic007G149200 Sobic007G149200 Sobic003G369533--Sobic007G149200 Sobic005G116400 Sobic005G116400 Sobic003G369533--Sobic005G116400 Sobic003G369533--Sobic007G065000 Sobic003G369533--Sobic003G352000 Sobic003G369533--Sobic003G369566 Sobic003G369533--Sobic003G169000 Sobic001G182700--Sobic001G182800 Sobic001G530201 Sobic001G530201 Sobic001G182700--Sobic001G530201 Sobic006G124800 Sobic006G124800 Sobic001G182700--Sobic006G124800 Sobic005G139750 Sobic005G139750 Sobic001G182700--Sobic005G139750 Sobic010G206600 Sobic010G206600 Sobic001G182700--Sobic010G206600 SobicK032300 SobicK032300 Sobic001G182700--SobicK032300 Sobic007G145801 Sobic007G145801 Sobic001G182700--Sobic007G145801 Sobic004G077700 Sobic004G077700 Sobic001G182700--Sobic004G077700 Sobic003G169100 Sobic003G169100 Sobic001G182700--Sobic003G169100
Octagon: transcription factors


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