Gene annotation
Transcriptome id Sobic.003G393600.3,Sobic.003G393600.1,Sobic.003G393600.2
Synonym Sb03g043110
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt A0A1B6Q7R0 , A0A1W0W108 , A0A1B6Q7Q7
Pfam PF02362
Panther DB PTHR31674 PTHR31674:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT2G24700 : Transcriptional factor B3 family protein
RAP-DB (Rice) LOC_Os01g67830.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026372
Brachypodium PNT73409 , PNT73413 , PNT73412 , PNT73411 , PNT73410
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G254000 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
2 Sobic.008G108300 peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
3 Sobic.003G290050 - -
4 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
5 Sobic.002G149966 - -
6 Sobic.001G266000 OsClp10 - Putative Clp protease homologue, expressed -
7 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
8 Sobic.002G222000 - -
9 Sobic.003G172900 NADPH-dependent oxidoreductase, putative, expressed K05581: NAD(P)H-quinone oxidoreductase subunit J
10 Sobic.002G150032 - -
11 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
12 Sobic.004G337600 - -
13 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
14 Sobic.003G173266 - K02956: RP-S15, MRPS15, small subunit ribosomal protein S15
15 Sobic.003G169300 chloroplast 30S ribosomal protein S2, putative, expressed K02967: RP-S2, MRPS2, small subunit ribosomal protein S2
16 Sobic.003G171900 - -
17 Sobic.004G251400 - -
18 Sobic.005G002050 - -
19 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
20 Sobic.005G110493 - -


Gene co-expression network
sample Sobic003G393600 Sobic003G393600 Sobic010G254000 Sobic010G254000 Sobic003G393600--Sobic010G254000 Sobic008G108300 Sobic008G108300 Sobic003G393600--Sobic008G108300 Sobic003G290050 Sobic003G290050 Sobic003G393600--Sobic003G290050 Sobic002G044500 Sobic002G044500 Sobic003G393600--Sobic002G044500 Sobic002G149966 Sobic002G149966 Sobic003G393600--Sobic002G149966 Sobic001G266000 Sobic001G266000 Sobic003G393600--Sobic001G266000 Sobic003G168500 Sobic003G168500 Sobic003G393600--Sobic003G168500 Sobic002G222000 Sobic002G222000 Sobic003G393600--Sobic002G222000 Sobic003G172900 Sobic003G172900 Sobic003G393600--Sobic003G172900 Sobic010G254000--Sobic002G222000 Sobic002G148166 Sobic002G148166 Sobic010G254000--Sobic002G148166 Sobic005G002050 Sobic005G002050 Sobic010G254000--Sobic005G002050 Sobic010G254000--Sobic003G172900 Sobic003G169300 Sobic003G169300 Sobic010G254000--Sobic003G169300 Sobic005G110493 Sobic005G110493 Sobic010G254000--Sobic005G110493 Sobic003G173266 Sobic003G173266 Sobic010G254000--Sobic003G173266 Sobic003G130200 Sobic003G130200 Sobic010G254000--Sobic003G130200 Sobic004G251400 Sobic004G251400 Sobic010G254000--Sobic004G251400 Sobic002G165200 Sobic002G165200 Sobic008G108300--Sobic002G165200 Sobic001G182800 Sobic001G182800 Sobic008G108300--Sobic001G182800 Sobic006G192600 Sobic006G192600 Sobic008G108300--Sobic006G192600 Sobic008G108300--Sobic003G393600 Sobic010G185250 Sobic010G185250 Sobic008G108300--Sobic010G185250 Sobic008G108300--Sobic010G254000 Sobic003G218950 Sobic003G218950 Sobic008G108300--Sobic003G218950 Sobic003G369533 Sobic003G369533 Sobic008G108300--Sobic003G369533 Sobic001G182700 Sobic001G182700 Sobic008G108300--Sobic001G182700 Sobic006G124850 Sobic006G124850 Sobic003G290050--Sobic006G124850 Sobic003G290050--Sobic002G149966 Sobic002G150032 Sobic002G150032 Sobic003G290050--Sobic002G150032 Sobic003G290050--Sobic002G044500 Sobic003G290050--Sobic001G266000 Sobic003G169400 Sobic003G169400 Sobic003G290050--Sobic003G169400 Sobic002G014900 Sobic002G014900 Sobic003G290050--Sobic002G014900 Sobic003G290050--Sobic003G168500 Sobic003G172850 Sobic003G172850 Sobic003G290050--Sobic003G172850 Sobic002G044500--Sobic003G168500 Sobic002G044500--Sobic002G149966 Sobic002G044500--Sobic003G169400 Sobic002G044500--Sobic002G150032 Sobic004G337600 Sobic004G337600 Sobic002G044500--Sobic004G337600 Sobic002G044500--Sobic003G172850 Sobic002G044500--Sobic003G172900 Sobic002G044500--Sobic006G124850 Sobic002G044500--Sobic001G266000 Sobic002G149966--Sobic002G150032 Sobic002G149966--Sobic002G044500 Sobic002G149966--Sobic006G124850 Sobic002G149966--Sobic001G266000 Sobic002G149966--Sobic003G290050 Sobic002G149966--Sobic002G014900 Sobic002G149966--Sobic003G172900 Sobic002G149966--Sobic003G168500 Sobic002G149966--Sobic003G172850 Sobic001G266000--Sobic002G150032 Sobic001G266000--Sobic003G172900 Sobic001G266000--Sobic002G149966 Sobic001G266000--Sobic003G172850 Sobic001G266000--Sobic003G173266 Sobic001G266000--Sobic002G014900 Sobic001G266000--Sobic002G044500 Sobic001G266000--Sobic002G222000 Sobic006G123800 Sobic006G123800 Sobic001G266000--Sobic006G123800 Sobic003G168500--Sobic002G044500 Sobic003G171900 Sobic003G171900 Sobic003G168500--Sobic003G171900 Sobic008G160300 Sobic008G160300 Sobic003G168500--Sobic008G160300 Sobic003G168500--Sobic003G172850 Sobic003G168500--Sobic003G169400 Sobic003G168500--Sobic004G337600 Sobic003G172400 Sobic003G172400 Sobic003G168500--Sobic003G172400 Sobic010G107601 Sobic010G107601 Sobic003G168500--Sobic010G107601 Sobic003G168500--Sobic003G169300 Sobic002G222000--Sobic003G172900 Sobic002G222000--Sobic002G148166 Sobic002G222000--Sobic010G254000 Sobic002G222000--Sobic003G173266 Sobic002G222000--Sobic001G266000 Sobic002G222000--Sobic005G002050 Sobic002G222000--Sobic003G169300 Sobic002G222000--Sobic005G110493 Sobic002G222000--Sobic003G130200 Sobic003G172900--Sobic004G251400 Sobic003G172900--Sobic002G150032 Sobic003G172900--Sobic001G266000 Sobic003G172900--Sobic003G173266 Sobic004G087000 Sobic004G087000 Sobic003G172900--Sobic004G087000 Sobic003G172900--Sobic003G172850 Sobic003G172900--Sobic002G044500 Sobic003G172900--Sobic002G222000 Sobic003G172900--Sobic002G149966
Octagon: transcription factors


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