Gene annotation
Transcriptome id Sobic.002G107466.1
Synonym -
Functional annotation -
UniProt A0A1W0W3D9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G003601 - -
2 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.004G283900 cytochrome P450, putative, expressed -
4 Sobic.005G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@cytokinin-O-glucosyltransferase 3, putative, expressed -
5 Sobic.008G172500 ATCHX, putative, expressed -
6 Sobic.006G252600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
7 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
8 Sobic.001G364400 cytochrome P450, putative, expressed -
9 Sobic.002G049400 LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G181900 aluminum-activated malate transporter, putative, expressed -
11 Sobic.006G074200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@"uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in stay green (QSTG18_3)"(PubMedID : 24655390)@LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.009G158500 - -
13 Sobic.004G232300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
14 Sobic.003G015200 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.002G163200 - -
16 Sobic.001G212451 - -
17 Sobic.007G058600 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
18 Sobic.003G269500 "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@SbMAX1a (cytochrome P450 711A enzyme in sorghum) synthesized 18-hydroxy-carlactonoic acid (18-hydroxy-CLA) directly from carlactone (CL)(PubMedID : 34970291)@cytochrome P450, putative, expressed -
19 Sobic.002G416500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G506750 - -


Gene co-expression network
sample Sobic002G107466 Sobic002G107466 Sobic006G003601 Sobic006G003601 Sobic002G107466--Sobic006G003601 Sobic005G066000 Sobic005G066000 Sobic002G107466--Sobic005G066000 Sobic004G283900 Sobic004G283900 Sobic002G107466--Sobic004G283900 Sobic005G192200 Sobic005G192200 Sobic002G107466--Sobic005G192200 Sobic008G172500 Sobic008G172500 Sobic002G107466--Sobic008G172500 Sobic006G252600 Sobic006G252600 Sobic002G107466--Sobic006G252600 Sobic002G365600 Sobic002G365600 Sobic002G107466--Sobic002G365600 Sobic001G364400 Sobic001G364400 Sobic002G107466--Sobic001G364400 Sobic002G049400 Sobic002G049400 Sobic002G107466--Sobic002G049400 Sobic006G003601--Sobic004G283900 Sobic006G003601--Sobic005G066000 Sobic006G003601--Sobic002G107466 Sobic002G163200 Sobic002G163200 Sobic006G003601--Sobic002G163200 Sobic001G212451 Sobic001G212451 Sobic006G003601--Sobic001G212451 Sobic006G003601--Sobic006G252600 Sobic004G248500 Sobic004G248500 Sobic006G003601--Sobic004G248500 Sobic005G097600 Sobic005G097600 Sobic006G003601--Sobic005G097600 Sobic001G503000 Sobic001G503000 Sobic006G003601--Sobic001G503000 Sobic005G066000--Sobic008G172500 Sobic005G149600 Sobic005G149600 Sobic005G066000--Sobic005G149600 Sobic006G074200 Sobic006G074200 Sobic005G066000--Sobic006G074200 Sobic005G066000--Sobic002G163200 Sobic006G117500 Sobic006G117500 Sobic005G066000--Sobic006G117500 Sobic003G287200 Sobic003G287200 Sobic005G066000--Sobic003G287200 Sobic003G015200 Sobic003G015200 Sobic005G066000--Sobic003G015200 Sobic005G066000--Sobic001G212451 Sobic006G183900 Sobic006G183900 Sobic005G066000--Sobic006G183900 Sobic004G283900--Sobic006G003601 Sobic004G249000 Sobic004G249000 Sobic004G283900--Sobic004G249000 Sobic003G203600 Sobic003G203600 Sobic004G283900--Sobic003G203600 Sobic004G283900--Sobic002G163200 Sobic004G283900--Sobic006G074200 Sobic002G404100 Sobic002G404100 Sobic004G283900--Sobic002G404100 Sobic004G283900--Sobic006G183900 Sobic010G271200 Sobic010G271200 Sobic004G283900--Sobic010G271200 Sobic004G283900--Sobic005G066000 Sobic002G365550 Sobic002G365550 Sobic005G192200--Sobic002G365550 Sobic002G124500 Sobic002G124500 Sobic005G192200--Sobic002G124500 Sobic002G365801 Sobic002G365801 Sobic005G192200--Sobic002G365801 Sobic003G228700 Sobic003G228700 Sobic005G192200--Sobic003G228700 Sobic005G066432 Sobic005G066432 Sobic005G192200--Sobic005G066432 Sobic005G192200--Sobic004G283900 Sobic001G506750 Sobic001G506750 Sobic005G192200--Sobic001G506750 Sobic005G160700 Sobic005G160700 Sobic005G192200--Sobic005G160700 Sobic005G192200--Sobic008G172500 Sobic008G172500--Sobic002G365600 Sobic003G269500 Sobic003G269500 Sobic008G172500--Sobic003G269500 Sobic008G172500--Sobic005G066000 Sobic008G172500--Sobic002G365550 Sobic008G172500--Sobic006G074200 Sobic009G073800 Sobic009G073800 Sobic008G172500--Sobic009G073800 Sobic009G109000 Sobic009G109000 Sobic008G172500--Sobic009G109000 Sobic008G172500--Sobic001G364400 Sobic002G365500 Sobic002G365500 Sobic008G172500--Sobic002G365500 Sobic006G252600--Sobic002G365600 Sobic006G252600--Sobic001G364400 Sobic006G252600--Sobic004G283900 Sobic006G252600--Sobic004G249000 Sobic006G252600--Sobic002G124500 Sobic006G252600--Sobic002G365550 Sobic006G252600--Sobic006G003601 Sobic005G163800 Sobic005G163800 Sobic006G252600--Sobic005G163800 Sobic004G348800 Sobic004G348800 Sobic006G252600--Sobic004G348800 Sobic002G365600--Sobic002G365550 Sobic002G365600--Sobic003G269500 Sobic002G365600--Sobic002G365500 Sobic002G365600--Sobic008G172500 Sobic002G365600--Sobic006G183900 Sobic004G071000 Sobic004G071000 Sobic002G365600--Sobic004G071000 Sobic002G365600--Sobic002G365801 Sobic002G365600--Sobic001G364400 Sobic010G212500 Sobic010G212500 Sobic002G365600--Sobic010G212500 Sobic001G364400--Sobic002G365600 Sobic001G364400--Sobic006G074200 Sobic001G364400--Sobic002G365500 Sobic001G364400--Sobic003G269500 Sobic001G364400--Sobic006G183900 Sobic001G364400--Sobic008G172500 Sobic001G364400--Sobic010G271200 Sobic006G150700 Sobic006G150700 Sobic001G364400--Sobic006G150700 Sobic002G318100 Sobic002G318100 Sobic001G364400--Sobic002G318100 Sobic007G141801 Sobic007G141801 Sobic002G049400--Sobic007G141801 Sobic004G185100 Sobic004G185100 Sobic002G049400--Sobic004G185100 Sobic002G049400--Sobic001G364400 Sobic002G416900 Sobic002G416900 Sobic002G049400--Sobic002G416900 Sobic001G487400 Sobic001G487400 Sobic002G049400--Sobic001G487400 Sobic009G187200 Sobic009G187200 Sobic002G049400--Sobic009G187200 Sobic009G158500 Sobic009G158500 Sobic002G049400--Sobic009G158500 Sobic006G019200 Sobic006G019200 Sobic002G049400--Sobic006G019200 Sobic001G114300 Sobic001G114300 Sobic002G049400--Sobic001G114300
Octagon: transcription factors


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