Gene annotation
Transcriptome id Sobic.006G003601.1
Synonym -
Functional annotation -
UniProt A0A1B6PJB1
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF33
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g37990.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011152
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G283900 cytochrome P450, putative, expressed -
2 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.002G107466 - -
4 Sobic.002G163200 - -
5 Sobic.001G212451 - -
6 Sobic.006G252600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
7 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.005G097600 gibberellin 20 oxidase 2, putative, expressed -
9 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G156250 - -
12 Sobic.005G115300 expressed protein -
13 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.005G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@cytokinin-O-glucosyltransferase 3, putative, expressed -
15 Sobic.008G133000 expressed protein -
16 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
17 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
18 Sobic.010G274400 reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.003G097300 - -
20 Sobic.007G109600 expressed protein -


Gene co-expression network
sample Sobic006G003601 Sobic006G003601 Sobic004G283900 Sobic004G283900 Sobic006G003601--Sobic004G283900 Sobic005G066000 Sobic005G066000 Sobic006G003601--Sobic005G066000 Sobic002G107466 Sobic002G107466 Sobic006G003601--Sobic002G107466 Sobic002G163200 Sobic002G163200 Sobic006G003601--Sobic002G163200 Sobic001G212451 Sobic001G212451 Sobic006G003601--Sobic001G212451 Sobic006G252600 Sobic006G252600 Sobic006G003601--Sobic006G252600 Sobic004G248500 Sobic004G248500 Sobic006G003601--Sobic004G248500 Sobic005G097600 Sobic005G097600 Sobic006G003601--Sobic005G097600 Sobic001G503000 Sobic001G503000 Sobic006G003601--Sobic001G503000 Sobic004G283900--Sobic006G003601 Sobic004G249000 Sobic004G249000 Sobic004G283900--Sobic004G249000 Sobic003G203600 Sobic003G203600 Sobic004G283900--Sobic003G203600 Sobic004G283900--Sobic002G163200 Sobic006G074200 Sobic006G074200 Sobic004G283900--Sobic006G074200 Sobic002G404100 Sobic002G404100 Sobic004G283900--Sobic002G404100 Sobic006G183900 Sobic006G183900 Sobic004G283900--Sobic006G183900 Sobic010G271200 Sobic010G271200 Sobic004G283900--Sobic010G271200 Sobic004G283900--Sobic005G066000 Sobic008G172500 Sobic008G172500 Sobic005G066000--Sobic008G172500 Sobic005G149600 Sobic005G149600 Sobic005G066000--Sobic005G149600 Sobic005G066000--Sobic006G074200 Sobic005G066000--Sobic002G163200 Sobic006G117500 Sobic006G117500 Sobic005G066000--Sobic006G117500 Sobic003G287200 Sobic003G287200 Sobic005G066000--Sobic003G287200 Sobic003G015200 Sobic003G015200 Sobic005G066000--Sobic003G015200 Sobic005G066000--Sobic001G212451 Sobic005G066000--Sobic006G183900 Sobic002G107466--Sobic006G003601 Sobic002G107466--Sobic005G066000 Sobic002G107466--Sobic004G283900 Sobic005G192200 Sobic005G192200 Sobic002G107466--Sobic005G192200 Sobic002G107466--Sobic008G172500 Sobic002G107466--Sobic006G252600 Sobic002G365600 Sobic002G365600 Sobic002G107466--Sobic002G365600 Sobic001G364400 Sobic001G364400 Sobic002G107466--Sobic001G364400 Sobic002G049400 Sobic002G049400 Sobic002G107466--Sobic002G049400 Sobic002G163200--Sobic006G117500 Sobic002G163200--Sobic001G503000 Sobic005G115300 Sobic005G115300 Sobic002G163200--Sobic005G115300 Sobic001G238500 Sobic001G238500 Sobic002G163200--Sobic001G238500 Sobic005G104200 Sobic005G104200 Sobic002G163200--Sobic005G104200 Sobic002G163200--Sobic003G287200 Sobic001G506600 Sobic001G506600 Sobic002G163200--Sobic001G506600 Sobic005G066300 Sobic005G066300 Sobic002G163200--Sobic005G066300 Sobic004G108800 Sobic004G108800 Sobic002G163200--Sobic004G108800 Sobic001G464300 Sobic001G464300 Sobic001G212451--Sobic001G464300 Sobic001G212451--Sobic004G248500 Sobic002G391200 Sobic002G391200 Sobic001G212451--Sobic002G391200 Sobic010G021700 Sobic010G021700 Sobic001G212451--Sobic010G021700 Sobic001G212451--Sobic005G097600 Sobic007G109600 Sobic007G109600 Sobic001G212451--Sobic007G109600 Sobic002G307900 Sobic002G307900 Sobic001G212451--Sobic002G307900 Sobic005G036900 Sobic005G036900 Sobic001G212451--Sobic005G036900 Sobic001G301400 Sobic001G301400 Sobic001G212451--Sobic001G301400 Sobic006G252600--Sobic002G365600 Sobic006G252600--Sobic001G364400 Sobic006G252600--Sobic004G283900 Sobic006G252600--Sobic004G249000 Sobic002G124500 Sobic002G124500 Sobic006G252600--Sobic002G124500 Sobic002G365550 Sobic002G365550 Sobic006G252600--Sobic002G365550 Sobic006G252600--Sobic006G003601 Sobic005G163800 Sobic005G163800 Sobic006G252600--Sobic005G163800 Sobic004G348800 Sobic004G348800 Sobic006G252600--Sobic004G348800 Sobic004G248500--Sobic005G115300 Sobic004G248500--Sobic001G503000 Sobic004G248500--Sobic001G464300 Sobic004G248500--Sobic007G109600 Sobic004G312200 Sobic004G312200 Sobic004G248500--Sobic004G312200 Sobic001G348800 Sobic001G348800 Sobic004G248500--Sobic001G348800 Sobic004G248500--Sobic006G183900 Sobic004G248500--Sobic005G104200 Sobic001G263300 Sobic001G263300 Sobic004G248500--Sobic001G263300 Sobic005G097600--Sobic001G263300 Sobic002G003700 Sobic002G003700 Sobic005G097600--Sobic002G003700 Sobic002G115600 Sobic002G115600 Sobic005G097600--Sobic002G115600 Sobic004G351200 Sobic004G351200 Sobic005G097600--Sobic004G351200 Sobic010G158400 Sobic010G158400 Sobic005G097600--Sobic010G158400 Sobic003G240400 Sobic003G240400 Sobic005G097600--Sobic003G240400 Sobic005G175900 Sobic005G175900 Sobic005G097600--Sobic005G175900 Sobic005G097600--Sobic004G248500 Sobic002G118900 Sobic002G118900 Sobic005G097600--Sobic002G118900 Sobic001G503000--Sobic001G506600 Sobic010G096700 Sobic010G096700 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000
Octagon: transcription factors


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