Gene annotation
Transcriptome id Sobic.002G141050.1
Synonym -
Functional annotation -
UniProt A0A1W0W3W7
Pfam PF13966
Panther DB PTHR33033:SF4 PTHR33033
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25270 : Ribonuclease H-like superfamily protein
RAP-DB (Rice) LOC_Os05g35850.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G018250 - -
2 Sobic.005G102600 - -
3 Sobic.002G282800 "Decreased expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
4 Sobic.009G185000 - -
5 Sobic.002G089300 LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
6 Sobic.010G207450 - -
7 Sobic.005G029300 - -
8 Sobic.001G090900 late embryogenesis abundant protein D-34, putative, expressed -
9 Sobic.004G196900 - -
10 Sobic.006G229400 PB1 domain containing protein, expressed -
11 Sobic.010G069700 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
12 Sobic.001G220600 - -
13 Sobic.001G122700 expressed protein -
14 Sobic.001G127600 ZOS3-15 - C2H2 zinc finger protein, expressed -
15 Sobic.010G200100 AP2 domain containing protein, expressed -
16 Sobic.003G049000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
17 Sobic.010G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
18 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -
19 Sobic.010G248150 - -
20 Sobic.001G458500 - -


Gene co-expression network
sample Sobic002G141050 Sobic002G141050 Sobic002G018250 Sobic002G018250 Sobic002G141050--Sobic002G018250 Sobic005G102600 Sobic005G102600 Sobic002G141050--Sobic005G102600 Sobic002G282800 Sobic002G282800 Sobic002G141050--Sobic002G282800 Sobic009G185000 Sobic009G185000 Sobic002G141050--Sobic009G185000 Sobic002G089300 Sobic002G089300 Sobic002G141050--Sobic002G089300 Sobic010G207450 Sobic010G207450 Sobic002G141050--Sobic010G207450 Sobic005G029300 Sobic005G029300 Sobic002G141050--Sobic005G029300 Sobic001G090900 Sobic001G090900 Sobic002G141050--Sobic001G090900 Sobic004G196900 Sobic004G196900 Sobic002G141050--Sobic004G196900 Sobic002G018250--Sobic010G207450 Sobic010G200100 Sobic010G200100 Sobic002G018250--Sobic010G200100 Sobic001G220600 Sobic001G220600 Sobic002G018250--Sobic001G220600 Sobic002G018250--Sobic005G102600 Sobic002G018250--Sobic002G141050 Sobic006G080200 Sobic006G080200 Sobic002G018250--Sobic006G080200 Sobic002G059100 Sobic002G059100 Sobic002G018250--Sobic002G059100 Sobic010G069700 Sobic010G069700 Sobic002G018250--Sobic010G069700 Sobic002G018000 Sobic002G018000 Sobic002G018250--Sobic002G018000 Sobic001G122700 Sobic001G122700 Sobic005G102600--Sobic001G122700 Sobic001G127600 Sobic001G127600 Sobic005G102600--Sobic001G127600 Sobic005G102600--Sobic009G185000 Sobic005G102600--Sobic002G282800 Sobic005G102600--Sobic002G018250 Sobic005G102600--Sobic010G207450 Sobic005G102600--Sobic002G089300 Sobic005G102600--Sobic001G090900 Sobic010G248150 Sobic010G248150 Sobic005G102600--Sobic010G248150 Sobic002G282800--Sobic009G185000 Sobic002G282800--Sobic001G090900 Sobic002G282800--Sobic005G102600 Sobic002G282800--Sobic010G069700 Sobic002G282800--Sobic002G018250 Sobic002G282800--Sobic002G089300 Sobic002G282800--Sobic002G141050 Sobic002G282800--Sobic010G207450 Sobic002G282800--Sobic005G029300 Sobic009G185000--Sobic002G282800 Sobic009G185000--Sobic001G090900 Sobic006G229400 Sobic006G229400 Sobic009G185000--Sobic006G229400 Sobic009G185000--Sobic002G089300 Sobic009G185000--Sobic005G102600 Sobic009G185000--Sobic004G196900 Sobic009G185000--Sobic005G029300 Sobic009G185000--Sobic001G122700 Sobic009G185000--Sobic002G141050 Sobic002G089300--Sobic004G196900 Sobic002G089300--Sobic006G229400 Sobic001G379800 Sobic001G379800 Sobic002G089300--Sobic001G379800 Sobic004G196000 Sobic004G196000 Sobic002G089300--Sobic004G196000 Sobic001G450100 Sobic001G450100 Sobic002G089300--Sobic001G450100 Sobic003G389500 Sobic003G389500 Sobic002G089300--Sobic003G389500 Sobic003G063600 Sobic003G063600 Sobic002G089300--Sobic003G063600 Sobic002G089300--Sobic005G029300 Sobic006G236100 Sobic006G236100 Sobic002G089300--Sobic006G236100 Sobic010G207450--Sobic002G018250 Sobic010G207450--Sobic002G059100 Sobic003G048900 Sobic003G048900 Sobic010G207450--Sobic003G048900 Sobic010G207450--Sobic005G102600 Sobic001G059800 Sobic001G059800 Sobic010G207450--Sobic001G059800 Sobic002G320300 Sobic002G320300 Sobic010G207450--Sobic002G320300 Sobic010G207450--Sobic002G282800 Sobic001G297300 Sobic001G297300 Sobic010G207450--Sobic001G297300 Sobic010G200300 Sobic010G200300 Sobic010G207450--Sobic010G200300 Sobic005G029300--Sobic002G089300 Sobic005G029300--Sobic004G196900 Sobic005G029300--Sobic006G229400 Sobic005G029300--Sobic009G185000 Sobic005G029300--Sobic001G379800 Sobic005G029300--Sobic002G282800 Sobic005G029300--Sobic001G450100 Sobic005G029300--Sobic005G102600 Sobic005G029300--Sobic001G090900 Sobic001G090900--Sobic009G185000 Sobic001G090900--Sobic002G282800 Sobic001G090900--Sobic004G196900 Sobic002G243100 Sobic002G243100 Sobic001G090900--Sobic002G243100 Sobic001G090900--Sobic005G102600 Sobic001G090900--Sobic002G089300 Sobic001G090900--Sobic006G229400 Sobic001G090900--Sobic005G029300 Sobic004G111500 Sobic004G111500 Sobic001G090900--Sobic004G111500 Sobic004G196900--Sobic002G089300 Sobic004G196900--Sobic002G243100 Sobic004G196900--Sobic006G229400 Sobic003G241400 Sobic003G241400 Sobic004G196900--Sobic003G241400 Sobic004G196900--Sobic001G379800 Sobic004G196900--Sobic004G196000 Sobic001G495850 Sobic001G495850 Sobic004G196900--Sobic001G495850 Sobic004G196900--Sobic006G236100 Sobic006G261000 Sobic006G261000 Sobic004G196900--Sobic006G261000
Octagon: transcription factors


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