Gene annotation
Transcriptome id Sobic.002G273500.1
Synonym GH9B18, Sb02g030710, AtGH9B18
Functional annotation endoglucanase, putative, expressed
UniProt A0A1W0W606
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF29
NCBI CDD -
KEGG Orthology K01179; endoglucanase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G39010 : glycosyl hydrolase 9B18
RAP-DB (Rice) LOC_Os09g36060.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a022345 , Zm00025a047771 , Zm00025a035938 , Zm00025a036077
Brachypodium KQK03329 , KQK17546 , KQJ98077 , KQJ98076 , PNT65007 , KQK20451 , KQJ98284 , KQK04131
Barley HORVU1Hr1G079980.16 , HORVU1Hr1G079980.11 , HORVU1Hr1G079980.18 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU6Hr1G081500.2 , HORVU3Hr1G029470.8 , HORVU6Hr1G081500.1 , HORVU3Hr1G029470.9 , HORVU1Hr1G019520.6 , HORVU1Hr1G019520.4 , HORVU1Hr1G019520.5 , HORVU1Hr1G019520.2 , HORVU1Hr1G019520.3 , HORVU1Hr1G019520.1 , HORVU5Hr1G081200.6 , HORVU5Hr1G081200.7 , HORVU5Hr1G081200.4 , HORVU5Hr1G081200.5 , HORVU5Hr1G081200.2 , HORVU5Hr1G081200.3 , HORVU5Hr1G081200.1 , HORVU5Hr1G081200.8 , HORVU5Hr1G081200.9 , HORVU1Hr1G079980.9 , HORVU1Hr1G079980.8 , HORVU1Hr1G079980.6 , HORVU1Hr1G079980.7 , HORVU1Hr1G079980.4 , HORVU1Hr1G079980.5 , HORVU1Hr1G079980.3 , HORVU1Hr1G079980.1
Wheat TraesCS5A02G317400 , TraesCS3D02G153400 , TraesCS1B02G107700 , TraesCS7D02G146000 , TraesCS1D02G090100 , TraesCS2A02G352800 , TraesCS2A02G352800 , TraesCS2A02G352800 , TraesCS2A02G352800 , TraesCS7A02G144700 , TraesCS1B02G377100 , TraesCS1A02G088700 , TraesCS3A02G144600 , TraesCS7B02G046900 , TraesCS5B02G318000 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1D02G365100 , TraesCS5D02G323700 , TraesCS5D02G323700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
2 Sobic.010G211100 expressed protein -
3 Sobic.009G180300 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
4 Sobic.006G034200 wax synthase, putative, expressed -
5 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
6 Sobic.006G067300 OsFBX103 - F-box domain containing protein, expressed -
7 Sobic.005G006701 - -
8 Sobic.004G038850 - -
9 Sobic.004G149200 ankyrin, putative, expressed -
10 Sobic.001G530700 transporter family protein, putative, expressed K15277: SLC35B3, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
11 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.009G012300 phosphoribosylformylglycinamidine synthase, putative, expressed K01933: phosphoribosylformylglycinamidine cyclo-ligase
13 Sobic.007G116500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
14 Sobic.010G043300 expressed protein -
15 Sobic.002G260100 - -
16 Sobic.001G092650 - -
17 Sobic.006G059400 - -
18 Sobic.008G057500 Aldehyde dehydrogenase 3 H1(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
19 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
20 Sobic.001G359100 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic002G273500 Sobic002G273500 Sobic009G187700 Sobic009G187700 Sobic002G273500--Sobic009G187700 Sobic010G211100 Sobic010G211100 Sobic002G273500--Sobic010G211100 Sobic009G180300 Sobic009G180300 Sobic002G273500--Sobic009G180300 Sobic006G034200 Sobic006G034200 Sobic002G273500--Sobic006G034200 Sobic004G089400 Sobic004G089400 Sobic002G273500--Sobic004G089400 Sobic006G067300 Sobic006G067300 Sobic002G273500--Sobic006G067300 Sobic005G006701 Sobic005G006701 Sobic002G273500--Sobic005G006701 Sobic004G038850 Sobic004G038850 Sobic002G273500--Sobic004G038850 Sobic004G149200 Sobic004G149200 Sobic002G273500--Sobic004G149200 Sobic009G187700--Sobic009G180300 Sobic007G068700 Sobic007G068700 Sobic009G187700--Sobic007G068700 Sobic003G062900 Sobic003G062900 Sobic009G187700--Sobic003G062900 Sobic001G153800 Sobic001G153800 Sobic009G187700--Sobic001G153800 Sobic006G059400 Sobic006G059400 Sobic009G187700--Sobic006G059400 Sobic003G070200 Sobic003G070200 Sobic009G187700--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic009G187700--Sobic001G359100 Sobic002G334400 Sobic002G334400 Sobic009G187700--Sobic002G334400 Sobic002G260100 Sobic002G260100 Sobic009G187700--Sobic002G260100 Sobic010G211100--Sobic002G273500 Sobic009G178500 Sobic009G178500 Sobic010G211100--Sobic009G178500 Sobic009G012300 Sobic009G012300 Sobic010G211100--Sobic009G012300 Sobic010G211100--Sobic004G038850 Sobic006G124600 Sobic006G124600 Sobic010G211100--Sobic006G124600 Sobic003G369600 Sobic003G369600 Sobic010G211100--Sobic003G369600 Sobic003G198016 Sobic003G198016 Sobic010G211100--Sobic003G198016 Sobic010G263300 Sobic010G263300 Sobic010G211100--Sobic010G263300 Sobic003G198048 Sobic003G198048 Sobic010G211100--Sobic003G198048 Sobic009G180300--Sobic009G187700 Sobic009G180300--Sobic006G067300 Sobic002G007500 Sobic002G007500 Sobic009G180300--Sobic002G007500 Sobic009G180300--Sobic004G089400 Sobic009G180300--Sobic005G006701 Sobic009G180300--Sobic003G062900 Sobic008G057500 Sobic008G057500 Sobic009G180300--Sobic008G057500 Sobic009G180300--Sobic002G260100 Sobic009G180300--Sobic004G149200 Sobic003G162500 Sobic003G162500 Sobic006G034200--Sobic003G162500 Sobic006G251301 Sobic006G251301 Sobic006G034200--Sobic006G251301 Sobic008G189800 Sobic008G189800 Sobic006G034200--Sobic008G189800 Sobic003G206100 Sobic003G206100 Sobic006G034200--Sobic003G206100 Sobic004G090700 Sobic004G090700 Sobic006G034200--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic006G034200--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic006G034200--Sobic004G159200 Sobic003G413400 Sobic003G413400 Sobic006G034200--Sobic003G413400 Sobic002G129600 Sobic002G129600 Sobic006G034200--Sobic002G129600 Sobic004G089400--Sobic005G006701 Sobic004G089400--Sobic004G149200 Sobic004G089400--Sobic003G062900 Sobic010G043300 Sobic010G043300 Sobic004G089400--Sobic010G043300 Sobic004G089400--Sobic002G260100 Sobic004G089400--Sobic006G059400 Sobic004G089400--Sobic006G067300 Sobic004G089400--Sobic003G070200 Sobic004G089400--Sobic001G359100 Sobic006G067300--Sobic005G006701 Sobic003G164300 Sobic003G164300 Sobic006G067300--Sobic003G164300 Sobic006G067300--Sobic004G089400 Sobic006G067300--Sobic010G043300 Sobic006G067300--Sobic009G180300 Sobic006G067300--Sobic004G149200 Sobic007G010350 Sobic007G010350 Sobic006G067300--Sobic007G010350 Sobic006G067300--Sobic008G057500 Sobic001G092700 Sobic001G092700 Sobic006G067300--Sobic001G092700 Sobic005G006701--Sobic004G089400 Sobic005G006701--Sobic010G043300 Sobic005G006701--Sobic004G149200 Sobic005G006701--Sobic007G010350 Sobic005G006701--Sobic006G067300 Sobic005G006701--Sobic002G260100 Sobic005G006701--Sobic001G092700 Sobic005G006701--Sobic003G062900 Sobic005G006701--Sobic003G164300 Sobic004G038850--Sobic002G273500 Sobic003G184666 Sobic003G184666 Sobic004G038850--Sobic003G184666 Sobic010G252200 Sobic010G252200 Sobic004G038850--Sobic010G252200 Sobic010G211200 Sobic010G211200 Sobic004G038850--Sobic010G211200 Sobic004G038850--Sobic009G012300 Sobic004G222150 Sobic004G222150 Sobic004G038850--Sobic004G222150 Sobic003G045450 Sobic003G045450 Sobic004G038850--Sobic003G045450 Sobic004G222200 Sobic004G222200 Sobic004G038850--Sobic004G222200 Sobic002G055800 Sobic002G055800 Sobic004G038850--Sobic002G055800 Sobic004G149200--Sobic004G089400 Sobic004G149200--Sobic005G006701 Sobic004G149200--Sobic010G043300 Sobic004G149200--Sobic006G067300 Sobic004G149200--Sobic007G010350 Sobic004G149200--Sobic003G062900 Sobic004G149200--Sobic002G260100 Sobic004G149200--Sobic001G092700 Sobic004G149200--Sobic006G059400
Octagon: transcription factors


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