Gene annotation
Transcriptome id Sobic.002G275000.1
Synonym STY1, SRS1, Sb02g030850
Functional annotation LRP1, putative, expressed
UniProt C5X676
Pfam PF05142
Panther DB PTHR31604
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75520 : SHI-related sequence 5
RAP-DB (Rice) LOC_Os09g36160.1 : LRP1, putative, expressed
MaizeGDB (Corn) Zm00025a047785
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G494700 nodulin, putative, expressed -
2 Sobic.004G029200 - -
3 Sobic.001G129750 - -
4 Sobic.003G020900 - -
5 Sobic.003G279000 aspartic proteinase nepenthesin precursor, putative, expressed -
6 Sobic.002G331900 CRP8 - Cysteine-rich family protein precursor, expressed -
7 Sobic.010G081300 expressed protein -
8 Sobic.001G185700 expressed protein -
9 Sobic.007G034650 - -
10 Sobic.008G031800 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.003G262000 plant-specific domain TIGR01568 family protein, expressed -
12 Sobic.001G302000 - -
13 Sobic.005G009900 pectinesterase, putative, expressed -
14 Sobic.002G430601 - -
15 Sobic.008G048000 OsSAUR15 - Auxin-responsive SAUR gene family member -
16 Sobic.003G089400 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
17 Sobic.001G371500 - -
18 Sobic.005G067000 OsWAK91 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.010G142132 - -
20 Sobic.006G190950 - K10706: SETX, senataxin


Gene co-expression network
sample Sobic002G275000 Sobic002G275000 Sobic001G494700 Sobic001G494700 Sobic002G275000--Sobic001G494700 Sobic004G029200 Sobic004G029200 Sobic002G275000--Sobic004G029200 Sobic001G129750 Sobic001G129750 Sobic002G275000--Sobic001G129750 Sobic003G020900 Sobic003G020900 Sobic002G275000--Sobic003G020900 Sobic003G279000 Sobic003G279000 Sobic002G275000--Sobic003G279000 Sobic002G331900 Sobic002G331900 Sobic002G275000--Sobic002G331900 Sobic010G081300 Sobic010G081300 Sobic002G275000--Sobic010G081300 Sobic001G185700 Sobic001G185700 Sobic002G275000--Sobic001G185700 Sobic007G034650 Sobic007G034650 Sobic002G275000--Sobic007G034650 Sobic001G494700--Sobic004G029200 Sobic001G494700--Sobic003G279000 Sobic001G494700--Sobic001G129750 Sobic001G494700--Sobic003G020900 Sobic005G009900 Sobic005G009900 Sobic001G494700--Sobic005G009900 Sobic003G262000 Sobic003G262000 Sobic001G494700--Sobic003G262000 Sobic001G302000 Sobic001G302000 Sobic001G494700--Sobic001G302000 Sobic008G130350 Sobic008G130350 Sobic001G494700--Sobic008G130350 Sobic001G494700--Sobic001G185700 Sobic004G029200--Sobic005G009900 Sobic004G029200--Sobic003G279000 Sobic004G029200--Sobic008G130350 Sobic004G029200--Sobic001G129750 Sobic004G029200--Sobic003G020900 Sobic004G029200--Sobic001G494700 Sobic004G029200--Sobic003G262000 Sobic004G029200--Sobic001G302000 Sobic004G029200--Sobic010G081300 Sobic001G129750--Sobic003G020900 Sobic001G129750--Sobic003G262000 Sobic002G430601 Sobic002G430601 Sobic001G129750--Sobic002G430601 Sobic001G129750--Sobic001G302000 Sobic006G080050 Sobic006G080050 Sobic001G129750--Sobic006G080050 Sobic006G190950 Sobic006G190950 Sobic001G129750--Sobic006G190950 Sobic001G018700 Sobic001G018700 Sobic001G129750--Sobic001G018700 Sobic003G020900--Sobic001G129750 Sobic003G020900--Sobic003G262000 Sobic003G020900--Sobic002G430601 Sobic003G020900--Sobic001G302000 Sobic003G020900--Sobic006G080050 Sobic003G020900--Sobic006G190950 Sobic003G020900--Sobic001G018700 Sobic003G279000--Sobic004G029200 Sobic003G279000--Sobic001G129750 Sobic003G279000--Sobic003G020900 Sobic003G279000--Sobic003G262000 Sobic003G279000--Sobic001G302000 Sobic003G279000--Sobic002G430601 Sobic003G279000--Sobic008G130350 Sobic003G279000--Sobic005G009900 Sobic003G279000--Sobic006G080050 Sobic002G331900--Sobic005G009900 Sobic002G331900--Sobic004G029200 Sobic003G284400 Sobic003G284400 Sobic002G331900--Sobic003G284400 Sobic002G331900--Sobic003G279000 Sobic007G048300 Sobic007G048300 Sobic002G331900--Sobic007G048300 Sobic002G331900--Sobic001G494700 Sobic004G015000 Sobic004G015000 Sobic002G331900--Sobic004G015000 Sobic002G331900--Sobic010G081300 Sobic003G398600 Sobic003G398600 Sobic002G331900--Sobic003G398600 Sobic010G081300--Sobic004G029200 Sobic010G081300--Sobic005G009900 Sobic010G081300--Sobic003G398600 Sobic010G081300--Sobic008G130350 Sobic010G081300--Sobic003G279000 Sobic001G538200 Sobic001G538200 Sobic010G081300--Sobic001G538200 Sobic010G081300--Sobic001G494700 Sobic010G081300--Sobic001G129750 Sobic010G081300--Sobic003G020900 Sobic003G066200 Sobic003G066200 Sobic001G185700--Sobic003G066200 Sobic001G328850 Sobic001G328850 Sobic001G185700--Sobic001G328850 Sobic001G185700--Sobic001G018700 Sobic007G034650--Sobic001G185700 Sobic002G099500 Sobic002G099500 Sobic007G034650--Sobic002G099500 Sobic007G034650--Sobic001G328850 Sobic005G120466 Sobic005G120466 Sobic007G034650--Sobic005G120466 Sobic003G384650 Sobic003G384650 Sobic007G034650--Sobic003G384650 Sobic003G178101 Sobic003G178101 Sobic007G034650--Sobic003G178101 Sobic003G154600 Sobic003G154600 Sobic007G034650--Sobic003G154600 Sobic004G171350 Sobic004G171350 Sobic007G034650--Sobic004G171350 Sobic008G031800 Sobic008G031800 Sobic007G034650--Sobic008G031800
Octagon: transcription factors


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