Gene annotation
Transcriptome id Sobic.005G009900.2
Synonym ATPME38, PME38
Functional annotation pectinesterase, putative, expressed
UniProt A0A1Z5RG16
Pfam PF01095
Panther DB PTHR31707 PTHR31707:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005618; cell wall


Orthologs (automatic annotation)
TAIR AT5G04970 : Plant invertase/pectin methylesterase inhibitor superfamily
RAP-DB (Rice) LOC_Os11g36240.1 : pectinesterase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G029200 - -
2 Sobic.003G279000 aspartic proteinase nepenthesin precursor, putative, expressed -
3 Sobic.002G331900 CRP8 - Cysteine-rich family protein precursor, expressed -
4 Sobic.010G081300 expressed protein -
5 Sobic.007G048300 berberine and berberine like domain containing protein, expressed -
6 Sobic.001G494700 nodulin, putative, expressed -
7 Sobic.008G130350 - -
8 Sobic.001G129750 - -
9 Sobic.003G020900 - -
10 Sobic.004G015000 DEF3 - Defensin and Defensin-like DEFL family, expressed -
11 Sobic.003G284400 subtilisin N-terminal Region family protein, expressed -
12 Sobic.003G398600 OsMADS98 - MADS-box family gene with M-beta type-box, expressed -
13 Sobic.001G419400 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.005G189500 expressed protein -
15 Sobic.003G262000 plant-specific domain TIGR01568 family protein, expressed -
16 Sobic.001G302000 - -
17 Sobic.002G430601 - -
18 Sobic.006G190950 - K10706: SETX, senataxin
19 Sobic.006G080050 - -
20 Sobic.007G125800 expressed protein -


Gene co-expression network
sample Sobic005G009900 Sobic005G009900 Sobic004G029200 Sobic004G029200 Sobic005G009900--Sobic004G029200 Sobic003G279000 Sobic003G279000 Sobic005G009900--Sobic003G279000 Sobic002G331900 Sobic002G331900 Sobic005G009900--Sobic002G331900 Sobic010G081300 Sobic010G081300 Sobic005G009900--Sobic010G081300 Sobic007G048300 Sobic007G048300 Sobic005G009900--Sobic007G048300 Sobic001G494700 Sobic001G494700 Sobic005G009900--Sobic001G494700 Sobic008G130350 Sobic008G130350 Sobic005G009900--Sobic008G130350 Sobic001G129750 Sobic001G129750 Sobic005G009900--Sobic001G129750 Sobic003G020900 Sobic003G020900 Sobic005G009900--Sobic003G020900 Sobic004G029200--Sobic005G009900 Sobic004G029200--Sobic003G279000 Sobic004G029200--Sobic008G130350 Sobic004G029200--Sobic001G129750 Sobic004G029200--Sobic003G020900 Sobic004G029200--Sobic001G494700 Sobic003G262000 Sobic003G262000 Sobic004G029200--Sobic003G262000 Sobic001G302000 Sobic001G302000 Sobic004G029200--Sobic001G302000 Sobic004G029200--Sobic010G081300 Sobic003G279000--Sobic004G029200 Sobic003G279000--Sobic001G129750 Sobic003G279000--Sobic003G020900 Sobic003G279000--Sobic003G262000 Sobic003G279000--Sobic001G302000 Sobic002G430601 Sobic002G430601 Sobic003G279000--Sobic002G430601 Sobic003G279000--Sobic008G130350 Sobic003G279000--Sobic005G009900 Sobic006G080050 Sobic006G080050 Sobic003G279000--Sobic006G080050 Sobic002G331900--Sobic005G009900 Sobic002G331900--Sobic004G029200 Sobic003G284400 Sobic003G284400 Sobic002G331900--Sobic003G284400 Sobic002G331900--Sobic003G279000 Sobic002G331900--Sobic007G048300 Sobic002G331900--Sobic001G494700 Sobic004G015000 Sobic004G015000 Sobic002G331900--Sobic004G015000 Sobic002G331900--Sobic010G081300 Sobic003G398600 Sobic003G398600 Sobic002G331900--Sobic003G398600 Sobic010G081300--Sobic004G029200 Sobic010G081300--Sobic005G009900 Sobic010G081300--Sobic003G398600 Sobic010G081300--Sobic008G130350 Sobic010G081300--Sobic003G279000 Sobic001G538200 Sobic001G538200 Sobic010G081300--Sobic001G538200 Sobic010G081300--Sobic001G494700 Sobic010G081300--Sobic001G129750 Sobic010G081300--Sobic003G020900 Sobic007G048300--Sobic004G015000 Sobic005G189500 Sobic005G189500 Sobic007G048300--Sobic005G189500 Sobic007G125800 Sobic007G125800 Sobic007G048300--Sobic007G125800 Sobic007G048300--Sobic005G009900 Sobic001G419400 Sobic001G419400 Sobic007G048300--Sobic001G419400 Sobic007G048300--Sobic003G398600 Sobic009G019550 Sobic009G019550 Sobic007G048300--Sobic009G019550 Sobic010G035100 Sobic010G035100 Sobic007G048300--Sobic010G035100 Sobic007G048300--Sobic002G331900 Sobic001G494700--Sobic004G029200 Sobic001G494700--Sobic003G279000 Sobic001G494700--Sobic001G129750 Sobic001G494700--Sobic003G020900 Sobic001G494700--Sobic005G009900 Sobic001G494700--Sobic003G262000 Sobic001G494700--Sobic001G302000 Sobic001G494700--Sobic008G130350 Sobic001G185700 Sobic001G185700 Sobic001G494700--Sobic001G185700 Sobic008G130350--Sobic004G029200 Sobic006G190950 Sobic006G190950 Sobic008G130350--Sobic006G190950 Sobic008G130350--Sobic001G129750 Sobic008G130350--Sobic003G020900 Sobic008G130350--Sobic003G279000 Sobic010G017600 Sobic010G017600 Sobic008G130350--Sobic010G017600 Sobic008G130350--Sobic003G262000 Sobic008G106550 Sobic008G106550 Sobic008G130350--Sobic008G106550 Sobic002G026600 Sobic002G026600 Sobic008G130350--Sobic002G026600 Sobic001G129750--Sobic003G020900 Sobic001G129750--Sobic003G262000 Sobic001G129750--Sobic002G430601 Sobic001G129750--Sobic001G302000 Sobic001G129750--Sobic006G080050 Sobic001G129750--Sobic006G190950 Sobic001G018700 Sobic001G018700 Sobic001G129750--Sobic001G018700 Sobic003G020900--Sobic001G129750 Sobic003G020900--Sobic003G262000 Sobic003G020900--Sobic002G430601 Sobic003G020900--Sobic001G302000 Sobic003G020900--Sobic006G080050 Sobic003G020900--Sobic006G190950 Sobic003G020900--Sobic001G018700
Octagon: transcription factors


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