Gene annotation
Transcriptome id Sobic.002G342600.1
Synonym Sb02g036670
Functional annotation cytochrome c, putative, expressed
UniProt C5XBN6
Pfam PF13442
Panther DB PTHR34688 PTHR34688:SF1
NCBI CDD -
KEGG Orthology K08906; cytochrome c6
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G45040 : Cytochrome c
RAP-DB (Rice) LOC_Os07g38000.1 : cytochrome c, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G192700 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.003G365900 ATOFP18/OFP18, putative, expressed -
3 Sobic.001G343300 3-beta-hydroxy-delta5-steroid dehydrogenase (At)(PubMedID : 27208977)@NAD dependent epimerase/dehydratase family protein, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
4 Sobic.010G219500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
5 Sobic.003G328000 50S ribosomal protein, putative, expressed K02914: RP-L34, MRPL34, large subunit ribosomal protein L34
6 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
7 Sobic.008G058500 cytochrome P450, putative, expressed -
8 Sobic.004G038300 cycloartenol synthase, putative, expressed -
9 Sobic.001G199632 - -
10 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
11 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
13 Sobic.004G253800 - -
14 Sobic.003G317800 lysM domain containing protein, putative -
15 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.004G328900 expressed protein -
17 Sobic.002G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
19 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
20 Sobic.008G097000 oxidoreductase, aldo/keto reductase family protein, putative, expressed K17744: L-galactose dehydrogenase


Gene co-expression network
sample Sobic002G342600 Sobic002G342600 Sobic002G192700 Sobic002G192700 Sobic002G342600--Sobic002G192700 Sobic003G365900 Sobic003G365900 Sobic002G342600--Sobic003G365900 Sobic001G343300 Sobic001G343300 Sobic002G342600--Sobic001G343300 Sobic010G219500 Sobic010G219500 Sobic002G342600--Sobic010G219500 Sobic003G328000 Sobic003G328000 Sobic002G342600--Sobic003G328000 Sobic005G190800 Sobic005G190800 Sobic002G342600--Sobic005G190800 Sobic008G058500 Sobic008G058500 Sobic002G342600--Sobic008G058500 Sobic004G038300 Sobic004G038300 Sobic002G342600--Sobic004G038300 Sobic001G199632 Sobic001G199632 Sobic002G342600--Sobic001G199632 Sobic003G064150 Sobic003G064150 Sobic002G192700--Sobic003G064150 Sobic008G097000 Sobic008G097000 Sobic002G192700--Sobic008G097000 Sobic002G277900 Sobic002G277900 Sobic002G192700--Sobic002G277900 Sobic003G008100 Sobic003G008100 Sobic002G192700--Sobic003G008100 Sobic010G266000 Sobic010G266000 Sobic002G192700--Sobic010G266000 Sobic005G050900 Sobic005G050900 Sobic002G192700--Sobic005G050900 Sobic001G489225 Sobic001G489225 Sobic002G192700--Sobic001G489225 Sobic004G193200 Sobic004G193200 Sobic002G192700--Sobic004G193200 Sobic001G158966 Sobic001G158966 Sobic002G192700--Sobic001G158966 Sobic004G253800 Sobic004G253800 Sobic003G365900--Sobic004G253800 Sobic009G035601 Sobic009G035601 Sobic003G365900--Sobic009G035601 Sobic005G200600 Sobic005G200600 Sobic003G365900--Sobic005G200600 Sobic006G249100 Sobic006G249100 Sobic003G365900--Sobic006G249100 Sobic002G141100 Sobic002G141100 Sobic003G365900--Sobic002G141100 Sobic009G119400 Sobic009G119400 Sobic003G365900--Sobic009G119400 Sobic002G033000 Sobic002G033000 Sobic003G365900--Sobic002G033000 Sobic003G365900--Sobic010G219500 Sobic008G066700 Sobic008G066700 Sobic003G365900--Sobic008G066700 Sobic001G343300--Sobic001G199632 Sobic001G343300--Sobic009G119400 Sobic008G163200 Sobic008G163200 Sobic001G343300--Sobic008G163200 Sobic005G183300 Sobic005G183300 Sobic001G343300--Sobic005G183300 Sobic002G329500 Sobic002G329500 Sobic001G343300--Sobic002G329500 Sobic004G060700 Sobic004G060700 Sobic001G343300--Sobic004G060700 Sobic001G435600 Sobic001G435600 Sobic001G343300--Sobic001G435600 Sobic007G009600 Sobic007G009600 Sobic001G343300--Sobic007G009600 Sobic001G307300 Sobic001G307300 Sobic001G343300--Sobic001G307300 Sobic003G295800 Sobic003G295800 Sobic010G219500--Sobic003G295800 Sobic002G306201 Sobic002G306201 Sobic010G219500--Sobic002G306201 Sobic009G098100 Sobic009G098100 Sobic010G219500--Sobic009G098100 Sobic010G219500--Sobic004G253800 Sobic007G171800 Sobic007G171800 Sobic010G219500--Sobic007G171800 Sobic009G001500 Sobic009G001500 Sobic010G219500--Sobic009G001500 Sobic004G191200 Sobic004G191200 Sobic010G219500--Sobic004G191200 Sobic008G030000 Sobic008G030000 Sobic010G219500--Sobic008G030000 Sobic007G034500 Sobic007G034500 Sobic010G219500--Sobic007G034500 Sobic003G328000--Sobic010G219500 Sobic003G246400 Sobic003G246400 Sobic003G328000--Sobic003G246400 Sobic004G317900 Sobic004G317900 Sobic003G328000--Sobic004G317900 Sobic003G328200 Sobic003G328200 Sobic003G328000--Sobic003G328200 Sobic002G414400 Sobic002G414400 Sobic003G328000--Sobic002G414400 Sobic001G040000 Sobic001G040000 Sobic003G328000--Sobic001G040000 Sobic001G453300 Sobic001G453300 Sobic003G328000--Sobic001G453300 Sobic010G233800 Sobic010G233800 Sobic003G328000--Sobic010G233800 Sobic004G116100 Sobic004G116100 Sobic003G328000--Sobic004G116100 Sobic006G175700 Sobic006G175700 Sobic005G190800--Sobic006G175700 Sobic002G128600 Sobic002G128600 Sobic005G190800--Sobic002G128600 Sobic003G007800 Sobic003G007800 Sobic005G190800--Sobic003G007800 Sobic006G227000 Sobic006G227000 Sobic005G190800--Sobic006G227000 Sobic001G249500 Sobic001G249500 Sobic005G190800--Sobic001G249500 Sobic003G317800 Sobic003G317800 Sobic005G190800--Sobic003G317800 Sobic005G190800--Sobic004G038300 Sobic004G328900 Sobic004G328900 Sobic005G190800--Sobic004G328900 Sobic007G069500 Sobic007G069500 Sobic005G190800--Sobic007G069500 Sobic009G010900 Sobic009G010900 Sobic008G058500--Sobic009G010900 Sobic007G222600 Sobic007G222600 Sobic008G058500--Sobic007G222600 Sobic001G275600 Sobic001G275600 Sobic008G058500--Sobic001G275600 Sobic008G058500--Sobic001G307300 Sobic001G379300 Sobic001G379300 Sobic008G058500--Sobic001G379300 Sobic008G058500--Sobic009G119400 Sobic002G209800 Sobic002G209800 Sobic008G058500--Sobic002G209800 Sobic008G058500--Sobic002G141100 Sobic006G238100 Sobic006G238100 Sobic008G058500--Sobic006G238100 Sobic004G038300--Sobic003G317800 Sobic001G255300 Sobic001G255300 Sobic004G038300--Sobic001G255300 Sobic004G038300--Sobic004G328900 Sobic004G038300--Sobic002G128600 Sobic004G038300--Sobic001G379300 Sobic004G038300--Sobic005G190800 Sobic004G038300--Sobic006G238100 Sobic004G038300--Sobic002G209800 Sobic004G038300--Sobic003G007800 Sobic001G199632--Sobic001G343300 Sobic001G199632--Sobic002G192700 Sobic001G199632--Sobic002G342600 Sobic003G212800 Sobic003G212800 Sobic001G199632--Sobic003G212800 Sobic001G199632--Sobic003G365900 Sobic005G035100 Sobic005G035100 Sobic001G199632--Sobic005G035100 Sobic001G199632--Sobic008G097000 Sobic007G003700 Sobic007G003700 Sobic001G199632--Sobic007G003700 Sobic001G199632--Sobic009G035601
Octagon: transcription factors


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